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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100057g32.3906.mrna |
| Orig protein id | gnl|cribi|Naga_100057g32.3906 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:314881..317999 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=mRNA|length=1106bp
AGTACACAAATAAACAGGACAGTAATGAGGAACAAGAACAGTCTATGTGC
CGTTTTGAAATTTTTGGGGTTGTACTGTTCGATCTTTCTGCTCTGCCTTG
TTGACGTACCCATTGGAGTTCTTGGGGATGACGTAGTGGCCAATGATATT
CAAGACACGCACGAAACTGAGAAAGCTGATTTCATTATTGATTCTGGATA
TGAAACGCCATTAGATAAAAAAAGCGACATGCTTAACTTGTTGAACGAAA
AGAACGCTGCCCTGTCCGCGTTAGAAAGCTCCATCAACTCCCTGCAAGAT
GAGCTGAAAGACAAAGTGGAGCGCTTGGCCACCGCTGAAGAGGAGATTCG
CAAATTATCTGAAAAGGTGACGGAACTAAACTCAAAGGCAGAGGAAGCTT
CACTGCACATTTCCCAGTTGGAGAGAGAACGGACCGAAACACGCGATGCG
GCAGCGGAAATCTTGCGTCTGAAAGAGAAAGTCGATGACCTGGAAGCTAA
ATTGACGGAAGCAACCAAAGAACGCGGAAATTTAGAGCAAGAAAAGGAGG
CGCAAAAAGCTGCTTGGGAGGAGGAAAAGCAGAGCTTCCAGGCTCGAGTA
ACCGTTCTCGAAGATGAAATGAAGGAAAATAGTTCGTCACTCAAAAATTT
GGAAGCAGAATATGCACAAAATTTAATTGCGGAGAAAGAGAAAACGGATT
CCATGACTTCTCAGACGGAGAAGGAGGCGGCTGAGGCGGCTAAGAGGATC
CAATCTCTAGAAGCCGAGTTGATTAAGGCACACAGCGAAGCTGCGACGGC
CCGCCAGAGCTTAGAGGAGCAGCTCAAGACGAAACAAAAAGAAGTGACCG
ATACAAAAGCCAAGCTTCGGCGCACTGTGAAGACTAAGTACTCGTTTCGA
ACCTTGTCTTCTGACTTTGTCGCGTGGTTCAACAAAAAGTGGGAGCGTTT
GTAAAAAGCTGTCAAGGAAGGTCCTTACCACAGATTAAAGCGTAATTTGC
AGAAAAACTGCAAAAAGATGAAAAAGGCTTTGTTTCATTCCAGGCTGTAT
TCGTTGAACAGAAATTATTAGCTTCTAGCTACTACTACAAAAGATATATT
GAACGA back to topprotein sequence of rna7318 >rna7318-protein ID=rna7318-protein|Name=rna7318|organism=Nannochloropsis gaditana|type=polypeptide|length=621bp
MVPWRRHCELIYLTSAKRLCFFALFLLLAWPPLVHADAAAAVNHGSTSGL
ENKKEAYRSDPAHLIVPTGHDTKYDKVDELTNLLQQKVAALVNAEKAITS
LENQLNIASKQLETTAQSLSASDRETSRLTQEVKELTHKLDAAEASAVAA
TAQATVAVDTATAAAKKETAAWIARAEKAEAGMDVAVTEATRLKAETQAL
QASVAAGKGLEGQWSEEKARMEKELAIVREEKDQAVAGLERAAAEAKARV
EEEKEGTEAAMGRMREEAAAAVAEEREKTAAAVSKAQEELSRALQVEREK
REEAVSAAMGEATRAKTRVQALEREVADADRRIASAQEQLSGKLAQREKE
TEALRAKLEEVLATKYTWRVLSGDFSAFSGRMAALTQAKARCGISWAARE
GKRRGEEAGRMLQPHVEAARMALGSQCREMEKRIQPLWTAHVLPPYREHV
EPRLAQAAAYLGPVWEGEVRPRLLQGWEWGKRGAGRARAWGQAQWLAVKR
RAVIWVRGQDWAAGLDAERVVTSLEYVLVATLFFLLRHLLWRLVMTALGL
VVGLITLPFRILFWIFFWPVLLFGGKRKAKMEVEGPQRGGAGKAGGGGGK
GRGAPGGPPPTHPLAHAQHGR back to topmRNA from alignment at CM002471.1:314881..317999+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=mRNA|length=3119bp|location=Sequence derived from alignment at CM002471.1:314881..317999+ (Nannochloropsis gaditana)
TTGCGATGAGTTCCCTTTCAACTTGATGACCGTGATGCTTGCACTTTCCT
GAATAACCTTTCCTGCGTCGTCTCTTACATTCGTTACCAATTTTCTCACC
GCATCACCCAGCTTGGTTTTCAAAGCAGGTGTGATATCACAGGCCTCTGT
CATGGTTCCTTGGAGAAGACATTGTGAGCTCATCTATTTGACTTCTGCCA
AACGTCTGTGCTTCTTtgcccttttcctgcttttggCCTGGCCTCCCCTC
GTTCATGCCGATGCAGCGGCTGCGGTTAACCATGGCAGCACGAGCGGGTT
GGAGAACAAAAAGGAGGCTTATCGCAGCGATCCTGCCCACCTTATTGTGC
CCACGGGCCACGACACGAAATACGACAAGGTGGACGAGCTGACGAACCTG
CTCCAGCAAAAAGTCGGTGCGTATACGATTTTTCTCCCTCACCatcgtct
cccctcccggtAGCCCCGCCCgctgccttccctccacggGATGCTTTCCT
AAATACCAGGCATGCTGTATCGATGCGGGGGCATAGAAGGTCTTGTACAG
TTGCTGTTTGATGAGATGCTGTGCATGCAGCTTCTAGCCTGAATTTCACG
CTCTTGCCCTCGACTCATCTCGCTTTTTCATTCTATCTCTCCCGAATCAC
ACGCCAGCGGCCCTCGTCAACGCGGAAAAAGCCATCACCTCCCTTGAAAA
TCAGCTCAACATCGCCTCCAAACAACTTGAAACGACAGCACAAAGCCTGT
CCGCCTCTGACAGAGAGACCTCGAGGCTCACGCAagaggtcaaggagctg
aCGCACAAGTTGGATGCAGCCGAAGCCTCCGCCGTGGCGGCGACTGCTCA
AGCCACTGTCGCTGTCGACACTGCCACTGCGGCAGCCAAGAAGGAGACTG
CGGCATGGATAGCCAGGGCggaaaaggcagaggcgggcATGGACGTGGCG
GTGACGGAGGCGACGCGGCTGAAGGCCGAGACGCAGGCCTTGCAAGCCAG
CGTGGCCGCGGgcaagggcctggaggggcagtggtctgaggagaaagcgc
ggatggagaaggagctggcGATCGTgcgggaagagaaggatcaGGCCGTG
GCGGGTTTGGAacgggcggcggccgaggcgaAAGcccgggtggaggagga
aaaggaagggaccGAAGCagcgatggggaggatgagggaagaagcCGCGG
CAGCCGTagcggaagagagggagaagacagcCGCAGCAGTCAGCAAGGCC
CAAGAGGAGCTTTCCCGGGCGTTgcaggtggaaagggagaagcgggagga
ggcggtctCGGCAGCCATGGGGGAGGCTACAAGGGCCAAGACCAGGGTGC
AGGCGCTGGAGCGAGAGGTGGCGGACGCGGATCGGCGGATAGCGAGCGCG
CAAGAACAGCTCTCAGGGAAATTGGCgcaaagggagaaggagacggaggc
gcTTCGGGCCAAGCTGGAAGAGGTGCTGGCCACCAAGTACACCTGGCGGG
TGCTGTCGGGGGATTTCTCGGCGTTCTCCGGGCGCATGGCGGCCCTTACA
CAGGCAAAGGCTCGGTGCGGGATAAGCTGGGCTGCACGAGAAGGCaagag
gcgaggagaagaggcggggcGGATGCTGCAACCGCATGTGGAGGCCGCGC
GGATGGCCCTAGGCTCTCAGTGccgggagatggagaagaggatcCAGCCC
CTGTGGACGGCCCACGTGCTACCCCCTTATCGGGAGCACGTAGAGCCCCG
ACTGGCTCAGGCGGCGGCATACCTGGGACCggtgtgggaaggagaggtcc
GGCCCCGGTTGCTGCAAGGCTGGGAgtggggaaagcggggggcggggcgc
gcGCGAGCATGGGGCCAGGCGCAGTGGTTGGCGGTGAAACGGAGGGCAGT
CATTTGGGTAAGGGGACAGGACTGGGCGGCCGGATTGGACGCGGAACGAG
TGGTCACGAGCCTTGAATACGTGCTGGtcgccaccctcttcttcctcctt
cggcacCTGCTCTGGCGCCTTGTCATGACAGCCCTAGGCCTTGTGGTGGG
GCTGATCACGCTGCCCTTCCGGATCCTCTTTTGGATTTTCTTCTGGCCGG
TCTTGCTTTTTggcgggaagagaaaggcgaaGATGGAGGTAGAAGGGCcg
cagagggggggagcggggaaggcaggagggggtggagggaaagggcgagg
ggctCCGGGCGGCCCGCCGCCGACGCACCCGTTGGCACACGCGCAGCATG
GCCGGTAAGCTTATGTAGGAGGCGgggtgagagaggagaggcggcgctga
aagggaggatgggcggGGACTGGGTGGGCGGACCGGAATTGTTGACTGCA
GGAGCGAAGGCGTGTCGCGGGTTGGGAAGGGTGaagacagaggaagacgc
gtgGGAGGACTGAAAGCacgagagcaaggagggaacggtCTCGACGAGGG
GAAATCAGTGCGGGATGGCAAGGGTCTGAGGGGCGTAAGGGAGAAATGGA
TGGGTCgggggagtgaggaagagcaCTCGTCCACTCGTCCGCGGGACGGC
GTGGTATGGAGAAGCCCTGAGTGTGTGGAAGAGGCGCCCGCGTGTGGGGA
CGGcaaaggaggatggaggacgaggaaacagTCTCGAGGAGCGGTTGGGA
CGGCacaggaggatggaggacgaggaaacagTCTCGAGGAGCGGTTGGGA
CGGCacaggaggatggaggacgaggaaacagTCTCGAGGAGCggttgggg
ggggcgaggcaaggggggcCCACAGAGTGCTGCGCGAGCGGAAGGACCAT
GTAGGAAGCACACgggtgggggatggggggagagCAATGCCccgaggagg
gtgggaggggaagggtcgcccccccggctcggagcgaggaggacgataga
ggcaggagggaggggcggcccGAGGCTCCGGGAAGGCAGGAGTCCTCAGG
GCACGGGCGGGTccaaaggggagagggcgcatTCAATCCCGCTCTGCcta
ggaaggagaggggggggccggCCTAGGGGGGGCCGCCTGGGAAAGACTGA
GAGAAAAAGACCCGTCGACTGTCTCCAGCCTAGGGGAAAGTCGACGCAAA
GAACAAAATCAGGACCTGA back to topCoding sequence (CDS) from alignment at CM002471.1:314881..317999+ >rna7318 ID=rna7318|Name=rna7318|organism=Nannochloropsis gaditana|type=CDS|length=3732bp|location=Sequence derived from alignment at CM002471.1:314881..317999+ (Nannochloropsis gaditana)
ATGGTTCCTTGGAGAAGACATTGTGAGCTCATCTATTTGACTTCTGCCAA
ACGTCTGTGCTTCTTtgcccttttcctgcttttggCCTGGCCTCCCCTCG
TTCATGCCGATGCAGCGGCTGCGGTTAACCATGGCAGCACGAGCGGGTTG
GAGAACAAAAAGGAGGCTTATCGCAGCGATCCTGCCCACCTTATTGTGCC
CACGGGCCACGACACGAAATACGACAAGGTGGACGAGCTGACGAACCTGC
TCCAGCAAAAAGTCGCGGCCCTCGTCAACGCGGAAAAAGCCATCACCTCC
CTTGAAAATCAGCTCAACATCGCCTCCAAACAACTTGAAACGACAGCACA
AAGCCTGTCCGCCTCTGACAGAGAGACCTCGAGGCTCACGCAagaggtca
aggagctgaCGCACAAGTTGGATGCAGCCGAAGCCTCCGCCGTGGCGGCG
ACTGCTCAAGCCACTGTCGCTGTCGACACTGCCACTGCGGCAGCCAAGAA
GGAGACTGCGGCATGGATAGCCAGGGCggaaaaggcagaggcgggcATGG
ACGTGGCGGTGACGGAGGCGACGCGGCTGAAGGCCGAGACGCAGGCCTTG
CAAGCCAGCGTGGCCGCGGgcaagggcctggaggggcagtggtctgagga
gaaagcgcggatggagaaggagctggcGATCGTgcgggaagagaaggatc
aGGCCGTGGCGGGTTTGGAacgggcggcggccgaggcgaAAGcccgggtg
gaggaggaaaaggaagggaccGAAGCagcgatggggaggatgagggaaga
agcCGCGGCAGCCGTagcggaagagagggagaagacagcCGCAGCAGTCA
GCAAGGCCCAAGAGGAGCTTTCCCGGGCGTTgcaggtggaaagggagaag
cgggaggaggcggtctCGGCAGCCATGGGGGAGGCTACAAGGGCCAAGAC
CAGGGTGCAGGCGCTGGAGCGAGAGGTGGCGGACGCGGATCGGCGGATAG
CGAGCGCGCAAGAACAGCTCTCAGGGAAATTGGCgcaaagggagaaggag
acggaggcgcTTCGGGCCAAGCTGGAAGAGGTGCTGGCCACCAAGTACAC
CTGGCGGGTGCTGTCGGGGGATTTCTCGGCGTTCTCCGGGCGCATGGCGG
CCCTTACACAGGCAAAGGCTCGGTGCGGGATAAGCTGGGCTGCACGAGAA
GGCaagaggcgaggagaagaggcggggcGGATGCTGCAACCGCATGTGGA
GGCCGCGCGGATGGCCCTAGGCTCTCAGTGccgggagatggagaagagga
tcCAGCCCCTGTGGACGGCCCACGTGCTACCCCCTTATCGGGAGCACGTA
GAGCCCCGACTGGCTCAGGCGGCGGCATACCTGGGACCggtgtgggaagg
agaggtccGGCCCCGGTTGCTGCAAGGCTGGGAgtggggaaagcgggggg
cggggcgcgcGCGAGCATGGGGCCAGGCGCAGTGGTTGGCGGTGAAACGG
AGGGCAGTCATTTGGGTAAGGGGACAGGACTGGGCGGCCGGATTGGACGC
GGAACGAGTGGTCACGAGCCTTGAATACGTGCTGGtcgccaccctcttct
tcctccttcggcacCTGCTCTGGCGCCTTGTCATGACAGCCCTAGGCCTT
GTGGTGGGGCTGATCACGCTGCCCTTCCGGATCCTCTTTTGGATTTTCTT
CTGGCCGGTCTTGCTTTTTggcgggaagagaaaggcgaaGATGGAGGTAG
AAGGGCcgcagagggggggagcggggaaggcaggagggggtggagggaaa
gggcgaggggctCCGGGCGGCCCGCCGCCGACGCACCCGTTGGCACACGC
GCAGCATGGCCGGTAAATGGTTCCTTGGAGAAGACATTGTGAGCTCATCT
ATTTGACTTCTGCCAAACGTCTGTGCTTCTTtgcccttttcctgcttttg
gCCTGGCCTCCCCTCGTTCATGCCGATGCAGCGGCTGCGGTTAACCATGG
CAGCACGAGCGGGTTGGAGAACAAAAAGGAGGCTTATCGCAGCGATCCTG
CCCACCTTATTGTGCCCACGGGCCACGACACGAAATACGACAAGGTGGAC
GAGCTGACGAACCTGCTCCAGCAAAAAGTCGCGGCCCTCGTCAACGCGGA
AAAAGCCATCACCTCCCTTGAAAATCAGCTCAACATCGCCTCCAAACAAC
TTGAAACGACAGCACAAAGCCTGTCCGCCTCTGACAGAGAGACCTCGAGG
CTCACGCAagaggtcaaggagctgaCGCACAAGTTGGATGCAGCCGAAGC
CTCCGCCGTGGCGGCGACTGCTCAAGCCACTGTCGCTGTCGACACTGCCA
CTGCGGCAGCCAAGAAGGAGACTGCGGCATGGATAGCCAGGGCggaaaag
gcagaggcgggcATGGACGTGGCGGTGACGGAGGCGACGCGGCTGAAGGC
CGAGACGCAGGCCTTGCAAGCCAGCGTGGCCGCGGgcaagggcctggagg
ggcagtggtctgaggagaaagcgcggatggagaaggagctggcGATCGTg
cgggaagagaaggatcaGGCCGTGGCGGGTTTGGAacgggcggcggccga
ggcgaAAGcccgggtggaggaggaaaaggaagggaccGAAGCagcgatgg
ggaggatgagggaagaagcCGCGGCAGCCGTagcggaagagagggagaag
acagcCGCAGCAGTCAGCAAGGCCCAAGAGGAGCTTTCCCGGGCGTTgca
ggtggaaagggagaagcgggaggaggcggtctCGGCAGCCATGGGGGAGG
CTACAAGGGCCAAGACCAGGGTGCAGGCGCTGGAGCGAGAGGTGGCGGAC
GCGGATCGGCGGATAGCGAGCGCGCAAGAACAGCTCTCAGGGAAATTGGC
gcaaagggagaaggagacggaggcgcTTCGGGCCAAGCTGGAAGAGGTGC
TGGCCACCAAGTACACCTGGCGGGTGCTGTCGGGGGATTTCTCGGCGTTC
TCCGGGCGCATGGCGGCCCTTACACAGGCAAAGGCTCGGTGCGGGATAAG
CTGGGCTGCACGAGAAGGCaagaggcgaggagaagaggcggggcGGATGC
TGCAACCGCATGTGGAGGCCGCGCGGATGGCCCTAGGCTCTCAGTGccgg
gagatggagaagaggatcCAGCCCCTGTGGACGGCCCACGTGCTACCCCC
TTATCGGGAGCACGTAGAGCCCCGACTGGCTCAGGCGGCGGCATACCTGG
GACCggtgtgggaaggagaggtccGGCCCCGGTTGCTGCAAGGCTGGGAg
tggggaaagcggggggcggggcgcgcGCGAGCATGGGGCCAGGCGCAGTG
GTTGGCGGTGAAACGGAGGGCAGTCATTTGGGTAAGGGGACAGGACTGGG
CGGCCGGATTGGACGCGGAACGAGTGGTCACGAGCCTTGAATACGTGCTG
GtcgccaccctcttcttcctccttcggcacCTGCTCTGGCGCCTTGTCAT
GACAGCCCTAGGCCTTGTGGTGGGGCTGATCACGCTGCCCTTCCGGATCC
TCTTTTGGATTTTCTTCTGGCCGGTCTTGCTTTTTggcgggaagagaaag
gcgaaGATGGAGGTAGAAGGGCcgcagagggggggagcggggaaggcagg
agggggtggagggaaagggcgaggggctCCGGGCGGCCCGCCGCCGACGC
ACCCGTTGGCACACGCGCAGCATGGCCGGTAA back to top
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