rna7311, rna7311 (mRNA) Nannochloropsis gaditana

Overview
Namerna7311
Unique Namerna7311
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length676
Alignment locationCM002471.1:301843..303176 -

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Properties
Property NameValue
Productchaperonin cpn10
Orig transcript idgnl|cribi|Naga_100472g5.10262.mrna
Orig protein idgnl|cribi|Naga_100472g5.10262
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:301843..303176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100472g5gene7076Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7311rna7311-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23380.1cds7294Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7311 ID=rna7311|Name=rna7311|organism=Nannochloropsis gaditana|type=mRNA|length=676bp
AAGACATAAAGCATGACATATCCCTCGAAAAGAGTGATAGCTTGATGCAC
GTACAAAGAAAATGATAGCGCGGCATACTTGGAGGATAAAAAAGCAGTAT
TGATTTTCCGTGGCATGTGCTCGCATGTCGCCCCGGGAAAGAGTAGTCGT
CGCACGCCCGAGTTCATGCTCTTCCGACTGAAAGTCATCCAAAGCCTACA
CAAAGACGTCGTGCTTATTACGCGGGGAAGAGCTGCTCGTCTCTCTCATA
TCCTACTTTCCTCAAAACGCCCACTCGCAGGATTATACAGTTGATAGATA
GCCGCCGAGGGGAACCAGCCTCTCCTTTTTCGGCATCATCGGCGGCAGAG
GGATGCTTCGACGCCCGCCAACACGCATTGAACTCAAACCAGAAGACGTG
GAAGAGCTCGAAGCCATTCAAGAACGGCGACGGGTAGAGCGACAGCACCA
GCTCCTCCATAAGGCGGGGACTGCAGGTGCTTCGGCCCCTTTAAGTAATA
TGGCCGACAATAATGGCGGGGAGCCTCCTGGAGTACGAGACGTAAAAACG
GAGCGTCCTCGCACGCCCACAGTTGCCGAGCGCATAGGTCTGCGTAAATG
AGATGGAAGCCGCGATCGGATGGCTCGCATCCTCGTGTACAAACAAAATG
ACACAAATGAAAGGCGACTTGATCCA
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protein sequence of rna7311

>rna7311-protein ID=rna7311-protein|Name=rna7311|organism=Nannochloropsis gaditana|type=polypeptide|length=191bp
MVQPATKLRSFLHLLPSCMQYLLVVVVLILSLGPAKAFIPLLPHMPLQHH
KYLAGGPDVVRMAVQDSSTLVSLPHDEYINTLPEQARSMKAEWQYLLVER
LEAPTETQGGLFLPSTDQDPLHMVRIVSIGSGLVGESGMLTTIENLGPGD
VAYVKQPWGIGPRDENWEGRKFSFIRSHDVLSRIGPTKGKE
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mRNA from alignment at CM002471.1:301843..303176-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7311 ID=rna7311|Name=rna7311|organism=Nannochloropsis gaditana|type=mRNA|length=1334bp|location=Sequence derived from alignment at CM002471.1:301843..303176- (Nannochloropsis gaditana)
GGATAAATGCCAATACACTGGCCATGGGGAGCAAAAGCAAAGCAGTACTT
GCCCTCCACCATGGCATAGCTTGCTGTGTGGGTGGGCATGTGCGTGGAAA
AGAAAGAATACATCAGAAAGGCCGCAGATGCATCTAGCTTTAAGTTGCTG
TTGTCTCGCAGGAAAGTCAACCAAGCTCGACACCTGTCAGGCTGACCCCC
CAGCACTCCGTTGCCTGACATTAAGGCGAATCGAAAAAGCGCATTCAGGG
CATAGAACCGTGACCCGTCTCTGCGTCGCCCGGTGAGAGGATATCAGGAC
TGCGACACTTTTTAGGAGGTGTTTTCCATTTGTCCGGAGGTTTGTGTGCC
TTCAGCGCGGTGCTTCCAGAAAGGTGGGAGGATACTTAAGTAGAATGTAC
GCCCCATCCCGTCACACACACAGGCAGCATGGTACAACCAGCTACAAAGC
TACGATCGTTTCTACACCTTTTGCCATCATGCATGCAATACCTTCTGGTA
GTGGTCGTCCTTATCCTGTCCTTGGGGCCCGCGAAGGCTTTCATTCCTCT
GCTACCACACATGCCACTGCAGCACCACAAATACCTTGCAGGGGGCCCTG
ATGTTGTCAGAATGGCTGTACAGGACTCTTCTACACTTGTGAGCCTTCCT
CATGACGAGTATATCAACACTCTTCCGGAGCAGGTATGGTAGTTGGCGAG
AAGATGCTCAAAAGGCCACGTAGACACACCCTAGAACATCACTCTCCCAG
CTTTTCCCCTTTTCATGGCTCTCATCTTGCCCTCTCTTTCCCTGGCAGGC
AAGGAGCATGAAAGCTGAATGGCAATACTTGCTTGTCGAACGTCTGGAAG
CGCCCACAGAAACACAAGGAGGCCTGTTCCTTCCGTCCACGGACCAGGAT
CCCCTGCACATGGTCCGCATCGTCTCCATAGGCTCAGGCCTCGTGGGAGA
GAGCGGGATGTTGACCACCATCGAGAATCTGGGACCGGGCGATGTAGCCT
ACGTCAAACAACCTTGGGGCATTGGCCCCCGCGACGAAAATTGGGAGGGG
CGGAAATTCTCCTTCATTCGGAGCCACGATGTGCTAAGCCGTATTGGTCC
CACTAAAGGGAAGGAGTAGTAAGGAGGGGAAGCGGAGAAGGAGAGGGGAA
GGGGCGACGATCGGAGAGGGTATGCAAAGGCCTTTGAAAGCTTTTTCGAA
CTTAATGTGTGCCGTGGTCCTCGAGCAGATGGTCTGCATGCCGGGAAGGA
AACCTTAAAACGAAAGCAATCACGACGACACAGCGTCTATGGAAGGGAAG
TTGGATCAAGTCGCCTTTCATTTGTGTCATTTTG
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Coding sequence (CDS) from alignment at CM002471.1:301843..303176-

>rna7311 ID=rna7311|Name=rna7311|organism=Nannochloropsis gaditana|type=CDS|length=1152bp|location=Sequence derived from alignment at CM002471.1:301843..303176- (Nannochloropsis gaditana)
GCAAGGAGCATGAAAGCTGAATGGCAATACTTGCTTGTCGAACGTCTGGA
AGCGCCCACAGAAACACAAGGAGGCCTGTTCCTTCCGTCCACGGACCAGG
ATCCCCTGCACATGGTCCGCATCGTCTCCATAGGCTCAGGCCTCGTGGGA
GAGAGCGGGATGTTGACCACCATCGAGAATCTGGGACCGGGCGATGTAGC
CTACGTCAAACAACCTTGGGGCATTGGCCCCCGCGACGAAAATTGGGAGG
GGCGGAAATTCTCCTTCATTCGGAGCCACGATGTGCTAAGCCGTATTGGT
CCCACTAAAGGGAAGGAGTAGATGGTACAACCAGCTACAAAGCTACGATC
GTTTCTACACCTTTTGCCATCATGCATGCAATACCTTCTGGTAGTGGTCG
TCCTTATCCTGTCCTTGGGGCCCGCGAAGGCTTTCATTCCTCTGCTACCA
CACATGCCACTGCAGCACCACAAATACCTTGCAGGGGGCCCTGATGTTGT
CAGAATGGCTGTACAGGACTCTTCTACACTTGTGAGCCTTCCTCATGACG
AGTATATCAACACTCTTCCGGAGCAGGCAAGGAGCATGAAAGCTGAATGG
CAATACTTGCTTGTCGAACGTCTGGAAGCGCCCACAGAAACACAAGGAGG
CCTGTTCCTTCCGTCCACGGACCAGGATCCCCTGCACATGGTCCGCATCG
TCTCCATAGGCTCAGGCCTCGTGGGAGAGAGCGGGATGTTGACCACCATC
GAGAATCTGGGACCGGGCGATGTAGCCTACGTCAAACAACCTTGGGGCAT
TGGCCCCCGCGACGAAAATTGGGAGGGGCGGAAATTCTCCTTCATTCGGA
GCCACGATGTGCTAAGCCGTATTGGTCCCACTAAAGGGAAGGAGTAGATG
GTACAACCAGCTACAAAGCTACGATCGTTTCTACACCTTTTGCCATCATG
CATGCAATACCTTCTGGTAGTGGTCGTCCTTATCCTGTCCTTGGGGCCCG
CGAAGGCTTTCATTCCTCTGCTACCACACATGCCACTGCAGCACCACAAA
TACCTTGCAGGGGGCCCTGATGTTGTCAGAATGGCTGTACAGGACTCTTC
TACACTTGTGAGCCTTCCTCATGACGAGTATATCAACACTCTTCCGGAGC
AG
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Synonyms
Publications