rna7310, rna7310 (mRNA) Nannochloropsis gaditana

Overview
Namerna7310
Unique Namerna7310
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1275
Alignment locationCM002471.1:300951..301875 +

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Properties
Property NameValue
ProductAnaphase-promoting complex, subunit CDC26
Orig transcript idgnl|cribi|Naga_100472g6.10258.mrna
Orig protein idgnl|cribi|Naga_100472g6.10258
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:300951..301875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100472g6gene7075Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7310rna7310-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23376.1cds7293Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7310 ID=rna7310|Name=rna7310|organism=Nannochloropsis gaditana|type=mRNA|length=1275bp
ATGGGAAAAGATGAGTTATCGATGAAAGAAGAAGAAAAAGAAGCTAGGGA
GCGAAAGCTGCGCAAGAAGGCGAAGAAGGAATCGAAACGGGCGGCCGAAC
TGCTCAAAATATCTGAGGCCGAGACCGCGGAGACAGAGGTCAAGGAGCCC
GCCGACAAGCTCCTGAACGGCACGACGAACGAGAAGCAGGATGAGCAATC
CTCAATTTTGCGCCTGAGCAAAGAGGAGAGGAAGCGTGCCAAGAAAGAGA
AGAAAAAGCAAGAGAAAATTGCCGCCGCCACGTCCCATGCCACCCCACTC
CCTTCCACCCCGTGCACCGCCGACGCCCCCCACCCCTTGAGCAAGAGCGA
GGCCCAGGCCTGGTGGGAGGAGAACGAGATCTTGGTCTCGGGCCCGGGGT
GCGACGCCTTCCTCCCCACCCTCTCCTTCGCGGGGGTGGGTTTCCCCCCC
GACTTGCTGAAGTGCACCGAGGGCTTCGCCCGCCCTACCCCCATCCAGGC
TCAGTGCTGGCCCGTCCTGATGGGCGGCAGAGACATTATCGGCATCGCCG
AGACCGGCTCCGGGAAGACGCTCACTTTCGTCCTCCCCGGCTTGGAGCGC
ATCCGCAAGGCAGGGGCCCCGGACGGGGGGGGAGTGGACATTCTGGTGGC
GACGCCGGGGCGGCTGGCAGACTTGATGGAGGAGGGGGAGTGCGACCTCT
CCCGGGTATCCTACTTGGTCTTGGACGAGGCGGACCGCATGCTCGACCAG
GGCTTCGAGCAGGCCATCCGCGGGATCGTGAGCCACTGTGTGCCCCGCGG
CCGGCGGCAGACGGCGTTGTTCTCCGCCACCTGGCCCGTGGCCATCCAGG
CATTGGCGGGAGAGTTCCTGGAAAATCCGGTTAAGGTGACGATCGGAGGG
GAGGATTTGAGCAGTAACAAGCGGGTGCAGCAGGTGGTGGAGGTGGTGGG
AGAGTTCGAGCGGGAGGGCCGGCTGCGGGGGCTTCTGACGCAGTACCACG
GTCGGCGCGACAACCGGGTTTTGGTCTTCGCGCTCTACAAGAAAGAAGCG
TCCCGATTGGAGCTGAATTTGCAGCGGCAGGGGTACAAGTGCTTAGGCAT
TCATGGAGACAAGAGCCAGAGCGATCGCATCGCCGCCATCGAGAAATTCA
AGACGAAGGAGGTCCCCCTGTTGGTGGCCACGGACGTCGCTGCCCGGGGC
CTGGACATCCCCGACGTGGAGGTGGTGATAAACTACTCCTTCCCTTTGAC
CATCGAAGACTACGTGCACAGGTAA
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protein sequence of rna7310

>rna7310-protein ID=rna7310-protein|Name=rna7310|organism=Nannochloropsis gaditana|type=polypeptide|length=82bp
MLRRPPTRIELKPEDVEELEAIQERRRVERQHQLLHKAGTAGASAPLSNM
ADNNGGEPPGVRDVKTERPRTPTVAERIGLRK
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mRNA from alignment at CM002471.1:300951..301875+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7310 ID=rna7310|Name=rna7310|organism=Nannochloropsis gaditana|type=mRNA|length=925bp|location=Sequence derived from alignment at CM002471.1:300951..301875+ (Nannochloropsis gaditana)
AAGACATAAAGCATGACATATCCCTCGAAAAGAGTGATAGCTTGATGCAC
GTACAAAGAAAATGATAGCGCGGCATACTTGGAGGATAAAAAAGCAGTAT
TGATTTTCCGTGGCATGTGCTCGCATGTCGCCCCGGGAAAGAGTAGTCGT
CGCACGCCCGAGTTCATGCTCTTCCGACTGAAAGTCATCCAAAGCCTACA
CAAAGACGTCGTGCTTATTACGCGGGGAAGAGCTGCTCGTCTCTCTCATA
TCCTACTTTCCTCAAAACGCCCACTCGCAGGATTATACAGTTGATAGATA
GCCGCCGAGGGGAACCAGCCTCTCCTTTTTCGGCATCATCGGCGGCAGAG
GGATGCTTCGACGCCCGCCAACACGCATTGAACTCAAACCagaagacgtg
gaagagCTCGAAGGTGAGATATAAATGAGAATATTAAGTGAAAGTCAACC
GGTGAAGCAATTTCGGCCATTACTATGGGAATGGTTGTAAGATgtttcct
cccgttcctccgaGGCAGGACTACTCCTGATATTTGAATGCATTCCCGTA
CCGCGGACCCATCCGTGCAGGTTTTTGCTATCACGCCATAAAATTATTTG
TTCAAAGCTTCTGACGCTTTTATAAAATTAATCATGTATCAATGTTGCCG
ATACCTTGACAGCCATTCAAGAACGGCGACGGGTAGAGCGAcagcaccag
ctcctccataAGGCGGGGACTGCAGGTGCTTCGGCCCCTTTAAGTAATAT
GGCCGACAATAATGGCGGGGAGCCTCCTGGAGTACGAGACGTAAAAACGG
AGCGTCCTCGCACGCCCACAGTTGCCGAGCGCATAGGTCTGCGTAAATGA
GATGGAAGCCGCGATCGGATGGCTCGCATCCTCGTGTACAAACAAAATGA
CACAAATGAAAGGCGACTTGATCCA
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Coding sequence (CDS) from alignment at CM002471.1:300951..301875+

>rna7310 ID=rna7310|Name=rna7310|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at CM002471.1:300951..301875+ (Nannochloropsis gaditana)
ATGCTTCGACGCCCGCCAACACGCATTGAACTCAAACCagaagacgtgga
agagCTCGAAGCCATTCAAGAACGGCGACGGGTAGAGCGAcagcaccagc
tcctccataAGGCGGGGACTGCAGGTGCTTCGGCCCCTTTAAGTAATATG
GCCGACAATAATGGCGGGGAGCCTCCTGGAGTACGAGACGTAAAAACGGA
GCGTCCTCGCACGCCCACAGTTGCCGAGCGCATAGGTCTGCGTAAATGAA
TGCTTCGACGCCCGCCAACACGCATTGAACTCAAACCagaagacgtggaa
gagCTCGAAGCCATTCAAGAACGGCGACGGGTAGAGCGAcagcaccagct
cctccataAGGCGGGGACTGCAGGTGCTTCGGCCCCTTTAAGTAATATGG
CCGACAATAATGGCGGGGAGCCTCCTGGAGTACGAGACGTAAAAACGGAG
CGTCCTCGCACGCCCACAGTTGCCGAGCGCATAGGTCTGCGTAAATGA
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Synonyms
Publications