|
|
Properties
| Property Name | Value |
|---|
| Product | cortactin-binding protein 2 |
| Orig transcript id | gnl|cribi|Naga_101268g1.7023.mrna |
| Orig protein id | gnl|cribi|Naga_101268g1.7023 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:295314..297248 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7307 ID=rna7307|Name=rna7307|organism=Nannochloropsis gaditana|type=mRNA|length=607bp
TCCTGACAGGCCCCGCCAGCGTCAGGGTCGACATGGGGGAGAAGGACAAG
GCTTGAGAGCTGACGACCGGCTCCAGCGACCTCCCCTCAGCCCGGAAGCA
TTTCTAATGCGCCCTTCGCTGGGAGCGTAAAGCCTCGAAGCTGATTGGTT
GCGATGGATGGCGCGCGCGCACGCAACCCGTCAGAGCCCTGCACGCCGTG
CGAGGACTCCTCTCGGAAACGTATTCGTCCAGAGCCTGGCCCTGGGTGGG
GACCGGCGGCAGTGAGGGACGTCGCCTCCACGCCCTCCCCCGGGGGCCCC
CGCGCCCGCGCGCGCCTTGCCCTGCACGCCCGCATCAACCACCCGCTACC
TCCATCGATCCAGCGGCATCTGCATCAAATCGTCGTGGCTTGGAAGCAGA
ACCCATGGTCACTTCGAGTCAACGAGACCCTCCCTCTGGCCCCTGTCCCG
CCACCTGAAGAACGTCGCCCGACAGCGGCGCCTCCCTGTGCGCCCACCGC
CCACGCCCAGCGCCAGACCCCGAGTCCCACCCTCCCCGCAGGGTCTTGCC
AGCCGGAGATGCCACGTGCGCTGTCTCCCAGCCTCTACCCCGAGACCTCG
GCATACG back to topprotein sequence of rna7307 >rna7307-protein ID=rna7307-protein|Name=rna7307|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MDLFIELGLLVGLASLLLVVSSINATLVTLSLLLGCLLLLAGVLEPFEIP
WYVWAALCLYLAVRHQGSGYTKGSLCKAAADGNIALVRKLLAVNHGQYAL
ELDHKGYSPLMHAARRGDLPMVRLLLATNLYDAHNVSIKSRSGKSALFLA
AQAKQEAMVRLLLEHGADPAGLARDSWAQRFLPFLTAPPASQRPIPAGPQ
PRRRARRPPPPDYPDVHPGPQPSSWQASSCSPPKAIPVAVALPPSAPPAS
TFAHASVSPGIVREGGGETLLPAGWEERITAEGHVFYVDHGGRRTSWERP
VSGVDM back to topmRNA from alignment at CM002471.1:295314..297248+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7307 ID=rna7307|Name=rna7307|organism=Nannochloropsis gaditana|type=mRNA|length=1935bp|location=Sequence derived from alignment at CM002471.1:295314..297248+ (Nannochloropsis gaditana)
AAAGTAGACCCTGTGTGGTGATTAATTGAACTtccaagacggggaggaac
aCTGCTttgacctccccacctctgCCAAGCCCAGCGACTTTTTCACAACA
ATCGTACTTAAGTGCCTATTTACGATGCAAATGTGACAAAGTTCGCATCG
CACGTCTTATCAATCGGCTAAAAGGTGCTTTATATGCTCTTGCAGGAATT
AAAACGTCACGATTGGACTCCTTTTCCACCAGTACGCTCCGAGCGTTGAA
GGGGATACACTGCGTTGCGCTGCATTAGAAGAGCTCCTGCAGCCAGGGTC
AGGATATAACATATGGACTTGTTCATCGAGCTAGGTTTGTTAGTCGGCTT
GGCGTCGTTGCTTCTCGTCGTGTCCTCGATCAATGCCACCTTGGtcacgc
tctccctcctccttgggtGCCTGTTGCTACTTGCTGGTGTGCTTGGTAAG
TAAGAAGGATGCGAGATACCACCCACTCAACGCCATACGGTGACAACCAC
ATCAACCTGTgatcctcctttctctcaccCCTAACTATGCCCCAGAGCCC
TTCGAGATTCCGTGGTACGTGTGGGCTGCCCTTTGCCTCTACCTCGCCGT
CCGTCACCAAGGTAGCGGATACACTAAAGGGAGCCTCTGCAAAGCGGCGG
CCGATGGAAACATAGCACTGGTTCGGAAGCTACTGGCGGTAAATCACGGC
CAGTACGCGCTGGAGCTGGACCATAAGGTGAGTGATCCCCGGGCAGATGA
AAGAAATTGCCTCCTGATAACCCCCATGAACTcttgttccctccccctcg
cccgcctgcccctcccttccctagGGCTATTCCCCTCTCATGCACGCGGC
CCGTCGAGGTGATTTGCCCATGGTGCGGCTCCTACTTGCCACCAACTTGT
ACGACGCGCACAATGTCTCCATCAAATCTCGCAGCGGGAAGTCTGCGCTC
TTCCTGGCAGCACAAGCCAAGCAGGAAGCGATGGTCCGACTCCTGCTGGA
GCATGGTGCTGATCCCGCTGGCTTGGCCCGGGACAGCTGGGCACaacgct
ttcttcccttcttgaccgcccctcccgcctctcaaCGCCCGATCCCCGCG
GGCCCACAGCCTCGACGCCGGGCGCGTCGTCCGCCCCCACCTgactaccc
ggatgtacacCCGGGGCctcagccttcctcctggcaagcatcctcctgct
cccccccaaaagccATCCCCGTCGCTgttgctctccctccgtcggcGCCT
CCGGCCTCAACCTTCGCCCatgcctccgtctccccgggcattgtgaggga
gggagggggggagacgcTCTTGCCCgccgggtgggaggagaggataaCCG
CGGAGGGGCACGTGTTCTATGTCGACCATGGAGGCCGACGGACAAGCTGG
GAGAGACCCGTGTCGGGCGTGGACATGTGAGGGGCGGgtgagggacaggg
agggctCGATGggcaagagagggaaagggggtagcggggctgggggagag
GCCTGAGtgcgagagaaagggaggacgtgtGTGAAGTAGAAATGGgtaaa
gagaggaagggcgagagTGGAaaagagcggggagggagggagaggaggga
gagagggagggagggaggaaggcagggaaggagaggggccggcCGGAGTG
TAGGTGAGGGGCTGCCACGGCGAAGGGGATAGAGGGCGATTCTCGTGGGG
CcaaaaatggcgggaaaTCCTTTGGCGAAAGAGACGAATCGTAAGGACAG
GTGTGCAGTAAAGCTAGGTTGTGTACAGAATGTAATGGGGAGATAGGGAG
GTAGACCGGAAGGCGTTGATGTCGCCCAGACCCGAGTCAAAGCACATCTT
ACAACGAAAATGATGGCGAGGCCGCTCCTTCATTGATCTCTAAGAGGGCC
TGACTGCCCCTCTTGCTGTCAGTGTGCCTTTCTGC back to topCoding sequence (CDS) from alignment at CM002471.1:295314..297248+ >rna7307 ID=rna7307|Name=rna7307|organism=Nannochloropsis gaditana|type=CDS|length=2763bp|location=Sequence derived from alignment at CM002471.1:295314..297248+ (Nannochloropsis gaditana)
ATGGACTTGTTCATCGAGCTAGGTTTGTTAGTCGGCTTGGCGTCGTTGCT
TCTCGTCGTGTCCTCGATCAATGCCACCTTGGtcacgctctccctcctcc
ttgggtGCCTGTTGCTACTTGCTGGTGTGCTTGAGCCCTTCGAGATTCCG
TGGTACGTGTGGGCTGCCCTTTGCCTCTACCTCGCCGTCCGTCACCAAGG
TAGCGGATACACTAAAGGGAGCCTCTGCAAAGCGGCGGCCGATGGAAACA
TAGCACTGGTTCGGAAGCTACTGGCGGTAAATCACGGCCAGTACGCGCTG
GAGCTGGACCATAAGGGCTATTCCCCTCTCATGCACGCGGCCCGTCGAGG
TGATTTGCCCATGGTGCGGCTCCTACTTGCCACCAACTTGTACGACGCGC
ACAATGTCTCCATCAAATCTCGCAGCGGGAAGTCTGCGCTCTTCCTGGCA
GCACAAGCCAAGCAGGAAGCGATGGTCCGACTCCTGCTGGAGCATGGTGC
TGATCCCGCTGGCTTGGCCCGGGACAGCTGGGCACaacgctttcttccct
tcttgaccgcccctcccgcctctcaaCGCCCGATCCCCGCGGGCCCACAG
CCTCGACGCCGGGCGCGTCGTCCGCCCCCACCTgactacccggatgtaca
cCCGGGGCctcagccttcctcctggcaagcatcctcctgctcccccccaa
aagccATCCCCGTCGCTgttgctctccctccgtcggcGCCTCCGGCCTCA
ACCTTCGCCCatgcctccgtctccccgggcattgtgagggagggaggggg
ggagacgcTCTTGCCCgccgggtgggaggagaggataaCCGCGGAGGGGC
ACGTGTTCTATGTCGACCATGGAGGCCGACGGACAAGCTGGGAGAGACCC
GTGTCGGGCGTGGACATGTGAATGGACTTGTTCATCGAGCTAGGTTTGTT
AGTCGGCTTGGCGTCGTTGCTTCTCGTCGTGTCCTCGATCAATGCCACCT
TGGtcacgctctccctcctccttgggtGCCTGTTGCTACTTGCTGGTGTG
CTTGAGCCCTTCGAGATTCCGTGGTACGTGTGGGCTGCCCTTTGCCTCTA
CCTCGCCGTCCGTCACCAAGGTAGCGGATACACTAAAGGGAGCCTCTGCA
AAGCGGCGGCCGATGGAAACATAGCACTGGTTCGGAAGCTACTGGCGGTA
AATCACGGCCAGTACGCGCTGGAGCTGGACCATAAGGGCTATTCCCCTCT
CATGCACGCGGCCCGTCGAGGTGATTTGCCCATGGTGCGGCTCCTACTTG
CCACCAACTTGTACGACGCGCACAATGTCTCCATCAAATCTCGCAGCGGG
AAGTCTGCGCTCTTCCTGGCAGCACAAGCCAAGCAGGAAGCGATGGTCCG
ACTCCTGCTGGAGCATGGTGCTGATCCCGCTGGCTTGGCCCGGGACAGCT
GGGCACaacgctttcttcccttcttgaccgcccctcccgcctctcaaCGC
CCGATCCCCGCGGGCCCACAGCCTCGACGCCGGGCGCGTCGTCCGCCCCC
ACCTgactacccggatgtacacCCGGGGCctcagccttcctcctggcaag
catcctcctgctcccccccaaaagccATCCCCGTCGCTgttgctctccct
ccgtcggcGCCTCCGGCCTCAACCTTCGCCCatgcctccgtctccccggg
cattgtgagggagggagggggggagacgcTCTTGCCCgccgggtgggagg
agaggataaCCGCGGAGGGGCACGTGTTCTATGTCGACCATGGAGGCCGA
CGGACAAGCTGGGAGAGACCCGTGTCGGGCGTGGACATGTGAATGGACTT
GTTCATCGAGCTAGGTTTGTTAGTCGGCTTGGCGTCGTTGCTTCTCGTCG
TGTCCTCGATCAATGCCACCTTGGtcacgctctccctcctccttgggtGC
CTGTTGCTACTTGCTGGTGTGCTTGAGCCCTTCGAGATTCCGTGGTACGT
GTGGGCTGCCCTTTGCCTCTACCTCGCCGTCCGTCACCAAGGTAGCGGAT
ACACTAAAGGGAGCCTCTGCAAAGCGGCGGCCGATGGAAACATAGCACTG
GTTCGGAAGCTACTGGCGGTAAATCACGGCCAGTACGCGCTGGAGCTGGA
CCATAAGGGCTATTCCCCTCTCATGCACGCGGCCCGTCGAGGTGATTTGC
CCATGGTGCGGCTCCTACTTGCCACCAACTTGTACGACGCGCACAATGTC
TCCATCAAATCTCGCAGCGGGAAGTCTGCGCTCTTCCTGGCAGCACAAGC
CAAGCAGGAAGCGATGGTCCGACTCCTGCTGGAGCATGGTGCTGATCCCG
CTGGCTTGGCCCGGGACAGCTGGGCACaacgctttcttcccttcttgacc
gcccctcccgcctctcaaCGCCCGATCCCCGCGGGCCCACAGCCTCGACG
CCGGGCGCGTCGTCCGCCCCCACCTgactacccggatgtacacCCGGGGC
ctcagccttcctcctggcaagcatcctcctgctcccccccaaaagccATC
CCCGTCGCTgttgctctccctccgtcggcGCCTCCGGCCTCAACCTTCGC
CCatgcctccgtctccccgggcattgtgagggagggagggggggagacgc
TCTTGCCCgccgggtgggaggagaggataaCCGCGGAGGGGCACGTGTTC
TATGTCGACCATGGAGGCCGACGGACAAGCTGGGAGAGACCCGTGTCGGG
CGTGGACATGTGA back to top
|