rna7304, rna7304 (mRNA) Nannochloropsis gaditana

Overview
Namerna7304
Unique Namerna7304
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length948
Alignment locationCM002471.1:292703..293406 +

Link to JBrowse

Properties
Property NameValue
ProductMembrane associated eicosanoid/glutathione metabolism-like domain protein
Orig transcript idgnl|cribi|Naga_100189g2.10217.mrna
Orig protein idgnl|cribi|Naga_100189g2.10217
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:292703..293406 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100189g2gene7069Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7304rna7304-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23396.1cds7287Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7304 ID=rna7304|Name=rna7304|organism=Nannochloropsis gaditana|type=mRNA|length=948bp
ATGGCCATAGAACTTGCTGAAAGCATCCAAGGCCGTTCCACACAGGCGCC
CAAGAAGGGTGGCGAGCTGGAAGAGCGGGTAACTTGGGCTGCCGGCGTGG
AGAATCAAGAGCGGGTATCCGGCTGTCTCGTTTTTCTTCCTGTTGCCATG
CACTGCCCCCTCATCAAGTGCAACCGCGGTAGAAAATGGCAGGCTCCCAC
GCCCTATTTCTTCTCGCATGTCCTCGTATTTCTCGTGTTCCTACCGTCCC
TTTCTTTGTCCTTCTCAATCAATGGAAGGACATCCGCTTTTCTTCCGGCC
ACCCCTTGTCCTTCCATGCGCTCGTCTTCCCGCTCGATGGATGCCAGTCT
TCACATGGACGACGAGGCGCATTACTCTGGAAATGATGGAAACCAAGGAG
AGACAGGTGCAAAGAAAGCAAATCGACGCCCTTCGCGTCCCCCCCGCCCC
CCCCCGGCGTCCGGAGGGAGGAAAGGGAATCCGGGGGGCCTCGCGGAAGG
AGGATGTGCCGCAGAGAGACATGGCACAAATCGTCGAGAGATCTGGGCAA
GACGGGCCTGTCTGGAAGCGAGCAGTAGACTTGGATGGCGTGGGACTGCC
GGGATCGGCGTCTTCTCGTCCTTCTCGGGGGGGGGCTGGCCCAGGAGGAA
GGGAGGGAGGGAGGGGGGGAAGGGGGGAGGGAGCGTCTTCGCGGCACCAA
AGTGGTGGACGGGGTGCGGGTGCAGCGGCCAAAGGGTACAGGGGAAAGGG
AGGGGGAAACAGAAGACCTGCGCAGCAGAAGAAGTCGTGGTGGACGAGCG
AATTCAACAAGATGGACGGAGAGCTGGAAGTTCCTCTTCCCTGGTGGGCA
GACAGGCCCCCGGAGGGAGGCTGGAAGTACAAGGAGATGAAAGTGGCGGA
ATTGAAGGAGGAGCTGGCGAGGAGGGGGGTGCAGGCGAATGGACATAA
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protein sequence of rna7304

>rna7304-protein ID=rna7304-protein|Name=rna7304|organism=Nannochloropsis gaditana|type=polypeptide|length=166bp
MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDE
DYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASS
AKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAA
VFLGIVVAFIAQFEYK
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mRNA from alignment at CM002471.1:292703..293406+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7304 ID=rna7304|Name=rna7304|organism=Nannochloropsis gaditana|type=mRNA|length=704bp|location=Sequence derived from alignment at CM002471.1:292703..293406+ (Nannochloropsis gaditana)
ATGGGTTACGATGAGTATGGCACAATCTATGGAGGATCCATGCTTCTGTC
TACATTGGTGACTTGTACGGGACTTCTTTATCTAAAACACGTCTGGACTC
TGACCATGCAGGTGTGTACGCTTTCAGAAGTGTGGAGTGTCGTAGACACA
GTAAGGAATTCAATCCATCTTAAATATACAAAGACTACCAAATGCGTTTT
TCAAGAAGAGCAGATCGGAATGTTGGGTGGCTGTTGCATATGACCTGTAT
CCAATCTGTCCAATTTCTCAATGTTATTCATTCTCTTCGTACATCTTTTC
CGCGCTTTTGTCAGGGGGGAGCGGCGATCAAATCGGGCAACAGGATCGAC
GAGGACTATTCCAAGCTCGGCTTGAATCGGCCACTAGAAGTCTCGGACGT
TGATCGTCAGCAGGATGCGCGATGGCGGCGTATCGTGGCGAACGATTTGG
AGAACATTCCTCTGGGTCTTATTGTGTTGTGGTCAGCTGCCTTAGCCAGT
AGTGCCAAAGAGtcagagggaggaattggGGTGATTGTATTGACGATCGT
CTTTACGGTGGCGCGCTTTGCTTATACGGCATGCTATGTTTTTGCCCTGC
AGCCCTGGCGCACCGTGGCCTGGACGCTGGGGGTGCTGAGTGTGGTGGCG
GCCGTGTTTTTGGGCATCGTGGTTGCCTTCATCGCACAATTTGAGTACAA
GTAA
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Coding sequence (CDS) from alignment at CM002471.1:292703..293406+

>rna7304 ID=rna7304|Name=rna7304|organism=Nannochloropsis gaditana|type=CDS|length=1002bp|location=Sequence derived from alignment at CM002471.1:292703..293406+ (Nannochloropsis gaditana)
ATGGGTTACGATGAGTATGGCACAATCTATGGAGGATCCATGCTTCTGTC
TACATTGGTGACTTGTACGGGACTTCTTTATCTAAAACACGTCTGGACTC
TGACCATGCAGGGGGGAGCGGCGATCAAATCGGGCAACAGGATCGACGAG
GACTATTCCAAGCTCGGCTTGAATCGGCCACTAGAAGTCTCGGACGTTGA
TCGTCAGCAGGATGCGCGATGGCGGCGTATCGTGGCGAACGATTTGGAGA
ACATTCCTCTGGGTCTTATTGTGTTGTGGTCAGCTGCCTTAGCCAGTAGT
GCCAAAGAGtcagagggaggaattggGGTGATTGTATTGACGATCGTCTT
TACGGTGGCGCGCTTTGCTTATACGGCATGCTATGTTTTTGCCCTGCAGC
CCTGGCGCACCGTGGCCTGGACGCTGGGGGTGCTGAGTGTGGTGGCGGCC
GTGTTTTTGGGCATCGTGGTTGCCTTCATCGCACAATTTGAGTACAAGTA
AATGGGTTACGATGAGTATGGCACAATCTATGGAGGATCCATGCTTCTGT
CTACATTGGTGACTTGTACGGGACTTCTTTATCTAAAACACGTCTGGACT
CTGACCATGCAGGGGGGAGCGGCGATCAAATCGGGCAACAGGATCGACGA
GGACTATTCCAAGCTCGGCTTGAATCGGCCACTAGAAGTCTCGGACGTTG
ATCGTCAGCAGGATGCGCGATGGCGGCGTATCGTGGCGAACGATTTGGAG
AACATTCCTCTGGGTCTTATTGTGTTGTGGTCAGCTGCCTTAGCCAGTAG
TGCCAAAGAGtcagagggaggaattggGGTGATTGTATTGACGATCGTCT
TTACGGTGGCGCGCTTTGCTTATACGGCATGCTATGTTTTTGCCCTGCAG
CCCTGGCGCACCGTGGCCTGGACGCTGGGGGTGCTGAGTGTGGTGGCGGC
CGTGTTTTTGGGCATCGTGGTTGCCTTCATCGCACAATTTGAGTACAAGT
AA
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Synonyms
Publications