EWM23396.1, cds7287 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|585104408|gb|EWM23396.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 336.65 bits (862), Expect = 6.636e-117 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 Query: 1 MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK 166 MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK Sbjct: 1 MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK 166
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173946404|gb|OQR94942.1| (hypothetical protein ACHHYP_00822 [Achlya hypogyna]) HSP 1 Score: 103.219 bits (256), Expect = 6.513e-25 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0 Query: 19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPL---EVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAF 159 L+ CTG+LY K++ TL +QGG +G R ED + GLN+ + E + + + +D RW+RI+ NDLEN+P G+++ W + LA V IVFTV R +T + FA+ RT AWT+G+LS++ GIV AF Sbjct: 12 LMICTGILYFKYLATLVVQGGKKFTAGTRAPEDMAASSGIPSQNFGLNQNIVESEAAQLAKAEDIRWQRIIGNDLENLPFGILLAWFSVLAGGNTSV-----TCVAFIVFTVVRVVHTLAFAFAIFWPRTSAWTIGILSILTMAINGIVGAF 158
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|954186139|gb|KRW99007.1| (hypothetical protein PPERSA_11608 [Pseudocohnilembus persalinus]) HSP 1 Score: 101.679 bits (252), Expect = 2.268e-24 Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 0 Query: 19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLG--LNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVA 158 + C +L+LK + T QG A + NRI EDY G L + EV+D + + RW+R V NDLENIP+ LIV + S S I V I FTVAR YT + +ALQPWRT+ W + + + VA+ GIV A Sbjct: 16 FMVCIFVLFLKVLLTNFRQGKATTMANNRIPEDYEAFGGKLRQKHEVTDYHKLDETRWKRQVMNDLENIPIALIVFLISF--SVNNNSASVITNDVCIITFTVARIIYTIAFAYALQPWRTLFWFIAIAATVASGINGIVEA 155
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173940196|gb|OQR89693.1| (hypothetical protein ACHHYP_06116 [Achlya hypogyna]) HSP 1 Score: 95.1301 bits (235), Expect = 5.994e-22 Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 11 GGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVD----RQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVV 148 G + + CT LLY+K++ T + SGNR ED + L D D DARW+RIVANDLENIPLGL++ W+A + + V T+VFT ARF +TA Y+ AL R+ + +GV+SV+ Sbjct: 4 GNKSHVEVVAICTVLLYIKYLITTLVGASKKFASGNRAPEDSPATKQDFGLHAEDADVGMAALADARWQRIVANDLENIPLGLLLAWAAVITGGDSKR-----TTVATLVFTAARFLHTAAYILALSKPRSFFYLIGVVSVL 140
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|813163964|ref|XP_012203042.1| (hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65] >gi|813226269|ref|XP_012212211.1| hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >gi|641521444|gb|KDO17081.1| hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >gi|641532307|gb|KDO26344.1| hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 93.9745 bits (232), Expect = 2.692e-21 Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 0 Query: 19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPLEVSDVDRQ---QDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPW-RTVAWTLGVLSVVAAVFLGIVVAF 159 L+ CT +LY+K++ +L +QGG +G R ED + GL+ + SD +Q D RW+RIV NDLEN+P G+I+ W++ LA S + IV TIV V A+ A ++F W RT AWTLG+LS++ GIV +F Sbjct: 11 LMLCTAILYVKYLASLMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSANIVESDAHQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA-GGNTSVTSVAYIVFTIVRVVHTLAF-ANHIF----WPRTSAWTLGILSMLTMAINGIVGSF 157
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173938124|gb|OQR88553.1| (hypothetical protein THRCLA_10247 [Thraustotheca clavata]) HSP 1 Score: 91.2781 bits (225), Expect = 4.104e-20 Identity = 58/162 (35.80%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 16 LSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNR------------------------PLEVSDVDR--QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAV 151 L L+ CTG+L +K + +QGG +G R ED S L LN+ P+ V R ++D RW R+V NDLENIP+GL++ W+A + G IVFTV+R A+T Y +QP R +AWT GVLS + V Sbjct: 7 LKVLIACTGVLAIKFYASTFIQGGKRFAAGTRPPEDQS-LSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSG-----AIIVFTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLV 162
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|669147200|ref|XP_008609162.1| (hypothetical protein SDRG_05234 [Saprolegnia diclina VS20] >gi|530739400|gb|EQC37642.1| hypothetical protein SDRG_05234 [Saprolegnia diclina VS20]) HSP 1 Score: 90.5077 bits (223), Expect = 4.459e-20 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPLEVSDVDRQ---QDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPW-RTVAWTLGVLSVVAAVFLGIVVAF 159 L+ CT +LY+K++ L +QGG +G R ED + GL+ + SD +Q D RW+RIV NDLEN+P G+I+ W++ LA S + I+ TIV V A+ A ++F W RT AWTLG+LS++ GIV +F Sbjct: 11 LMLCTAILYVKYLAALMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSTNVVDSDAYQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA-GGNTSVTSVAYIIFTIVRVVHTLAF-ANHIF----WPRTSAWTLGILSMLTMAINGIVGSF 157
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|585107564|gb|EWM25706.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 90.8929 bits (224), Expect = 6.003e-20 Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 0 Query: 3 YDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKL---------GLNRPLEVSDVDR------QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAF 159 ++E + G + L + L +KH+ T+ +QGGA +G R ED + G + E + D+ Q + RW RIVANDLENIPLGLI+ W + + + + +VL + FTV+R +T Y QP R +A+ GVL+VV G++ AF Sbjct: 9 FNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAH-----VVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAF 175
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173947604|gb|OQR95843.1| (hypothetical protein THRCLA_07520 [Thraustotheca clavata]) HSP 1 Score: 89.7373 bits (221), Expect = 1.164e-19 Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 0 Query: 13 SMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDED--YSKLGLNRPLEVSDVDR--------QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIV--FTVARFAYTACYVFALQPWRTVAWTLGVLSV 147 S+ +T T +LY K ++T T+QGG +G R ED + + L+ V++ ++D RW+RIV NDLENIP+GL+V W A GG + + + FT AR +T Y LQP R AW LG SV Sbjct: 2 SLATKAWITSTAVLYAKFIFTSTIQGGKRFAAGTRPPEDKIFKQYNKTNQLQSFGVEKTGVNAAALEEDIRWQRIVRNDLENIPIGLLVAWGAV-------QSGGFEAVTTSAIATFTAARLFHTYAYANGLQPHRGYAWALGAASV 141
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173957289|gb|OQS03853.1| (hypothetical protein THRCLA_03859 [Thraustotheca clavata]) HSP 1 Score: 88.5817 bits (218), Expect = 2.179e-19 Identity = 54/144 (37.50%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 12 GSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDED-------YSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVV 148 G+ L + C+ LLY+K V + + SGNR E+ GL+ E R +D RW+RIV ND+ENIPLGLI W+AAL + IV T+VFT+ RF +T Y A R A+ LGV+ +V Sbjct: 4 GNSHLQVVAICSLLLYIKFVASTIIGARKKFASGNRAPEETRNGDGYKQDFGLHSDDEEDQNARLEDMRWQRIVENDMENIPLGLIFAWAAALTNGNHTQ-----TIVATVVFTLCRFTHTISYANAWSKPRIAAFLLGVICIV 142 The following BLAST results are available for this feature:
BLAST of EWM23396.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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