EWM23396.1, cds7287 (CDS) Nannochloropsis gaditana

Overview
NameEWM23396.1
Unique Namecds7287
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:292703..292813 +
Alignment locationCM002471.1:293017..293406 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23396.1
ProductMembrane associated eicosanoid/glutathione metabolism-like domain protein
Orig transcript idgnl|cribi|Naga_100189g2.10217.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:292703..292813 +
CM002471.1supercontigCM002471.1:293017..293406 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001129Membr-assoc_MAPEG
IPR023352MAPEG-like_dom
Homology
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|585104408|gb|EWM23396.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 336.65 bits (862), Expect = 6.636e-117
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query:    1 MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK 166
            MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK
Sbjct:    1 MGYDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAFIAQFEYK 166          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173946404|gb|OQR94942.1| (hypothetical protein ACHHYP_00822 [Achlya hypogyna])

HSP 1 Score: 103.219 bits (256), Expect = 6.513e-25
Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPL---EVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAF 159
            L+ CTG+LY K++ TL +QGG    +G R  ED +          GLN+ +   E + + + +D RW+RI+ NDLEN+P G+++ W + LA             V  IVFTV R  +T  + FA+   RT AWT+G+LS++     GIV AF
Sbjct:   12 LMICTGILYFKYLATLVVQGGKKFTAGTRAPEDMAASSGIPSQNFGLNQNIVESEAAQLAKAEDIRWQRIIGNDLENLPFGILLAWFSVLAGGNTSV-----TCVAFIVFTVVRVVHTLAFAFAIFWPRTSAWTIGILSILTMAINGIVGAF 158          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|954186139|gb|KRW99007.1| (hypothetical protein PPERSA_11608 [Pseudocohnilembus persalinus])

HSP 1 Score: 101.679 bits (252), Expect = 2.268e-24
Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = 0
Query:   19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLG--LNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVA 158
             + C  +L+LK + T   QG A   + NRI EDY   G  L +  EV+D  +  + RW+R V NDLENIP+ LIV   +   S    S   I   V  I FTVAR  YT  + +ALQPWRT+ W + + + VA+   GIV A
Sbjct:   16 FMVCIFVLFLKVLLTNFRQGKATTMANNRIPEDYEAFGGKLRQKHEVTDYHKLDETRWKRQVMNDLENIPIALIVFLISF--SVNNNSASVITNDVCIITFTVARIIYTIAFAYALQPWRTLFWFIAIAATVASGINGIVEA 155          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173940196|gb|OQR89693.1| (hypothetical protein ACHHYP_06116 [Achlya hypogyna])

HSP 1 Score: 95.1301 bits (235), Expect = 5.994e-22
Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 0
Query:   11 GGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNRPLEVSDVD----RQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVV 148
            G    +  +  CT LLY+K++ T  +       SGNR  ED      +  L   D D       DARW+RIVANDLENIPLGL++ W+A +     +        V T+VFT ARF +TA Y+ AL   R+  + +GV+SV+
Sbjct:    4 GNKSHVEVVAICTVLLYIKYLITTLVGASKKFASGNRAPEDSPATKQDFGLHAEDADVGMAALADARWQRIVANDLENIPLGLLLAWAAVITGGDSKR-----TTVATLVFTAARFLHTAAYILALSKPRSFFYLIGVVSVL 140          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|813163964|ref|XP_012203042.1| (hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65] >gi|813226269|ref|XP_012212211.1| hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >gi|641521444|gb|KDO17081.1| hypothetical protein SPRG_17314 [Saprolegnia parasitica CBS 223.65] >gi|641532307|gb|KDO26344.1| hypothetical protein SPRG_08418 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 93.9745 bits (232), Expect = 2.692e-21
Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 0
Query:   19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPLEVSDVDRQ---QDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPW-RTVAWTLGVLSVVAAVFLGIVVAF 159
            L+ CT +LY+K++ +L +QGG    +G R  ED +          GL+  +  SD  +Q    D RW+RIV NDLEN+P G+I+ W++ LA     S   +  IV TIV  V   A+ A ++F    W RT AWTLG+LS++     GIV +F
Sbjct:   11 LMLCTAILYVKYLASLMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSANIVESDAHQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA-GGNTSVTSVAYIVFTIVRVVHTLAF-ANHIF----WPRTSAWTLGILSMLTMAINGIVGSF 157          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173938124|gb|OQR88553.1| (hypothetical protein THRCLA_10247 [Thraustotheca clavata])

HSP 1 Score: 91.2781 bits (225), Expect = 4.104e-20
Identity = 58/162 (35.80%), Postives = 79/162 (48.77%), Query Frame = 0
Query:   16 LSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKLGLNR------------------------PLEVSDVDR--QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAV 151
            L  L+ CTG+L +K   +  +QGG    +G R  ED S L LN+                        P+ V    R  ++D RW R+V NDLENIP+GL++ W+A  +        G       IVFTV+R A+T  Y   +QP R +AWT GVLS +  V
Sbjct:    7 LKVLIACTGVLAIKFYASTFIQGGKRFAAGTRPPEDQS-LSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSG-----AIIVFTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLV 162          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|669147200|ref|XP_008609162.1| (hypothetical protein SDRG_05234 [Saprolegnia diclina VS20] >gi|530739400|gb|EQC37642.1| hypothetical protein SDRG_05234 [Saprolegnia diclina VS20])

HSP 1 Score: 90.5077 bits (223), Expect = 4.459e-20
Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   19 LVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYS--------KLGLNRPLEVSDVDRQ---QDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPW-RTVAWTLGVLSVVAAVFLGIVVAF 159
            L+ CT +LY+K++  L +QGG    +G R  ED +          GL+  +  SD  +Q    D RW+RIV NDLEN+P G+I+ W++ LA     S   +  I+ TIV  V   A+ A ++F    W RT AWTLG+LS++     GIV +F
Sbjct:   11 LMLCTAILYVKYLAALMVQGGKKFTAGTRAPEDMAASSAIPRQNFGLSTNVVDSDAYQQAKADDIRWQRIVGNDLENLPFGIILAWTSILA-GGNTSVTSVAYIIFTIVRVVHTLAF-ANHIF----WPRTSAWTLGILSMLTMAINGIVGSF 157          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|585107564|gb|EWM25706.1| (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 90.8929 bits (224), Expect = 6.003e-20
Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    3 YDEYGTIYGGSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDEDYSKL---------GLNRPLEVSDVDR------QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVVAAVFLGIVVAF 159
            ++E   + G +  L      +  L +KH+ T+ +QGGA   +G R  ED   +         G  +  E  + D+      Q + RW RIVANDLENIPLGLI+ W +  +  +  +      +VL + FTV+R  +T  Y    QP R +A+  GVL+VV     G++ AF
Sbjct:    9 FNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAH-----VVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAF 175          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173947604|gb|OQR95843.1| (hypothetical protein THRCLA_07520 [Thraustotheca clavata])

HSP 1 Score: 89.7373 bits (221), Expect = 1.164e-19
Identity = 53/147 (36.05%), Postives = 74/147 (50.34%), Query Frame = 0
Query:   13 SMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDED--YSKLGLNRPLEVSDVDR--------QQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIV--FTVARFAYTACYVFALQPWRTVAWTLGVLSV 147
            S+     +T T +LY K ++T T+QGG    +G R  ED  + +      L+   V++        ++D RW+RIV NDLENIP+GL+V W A          GG   +  + +  FT AR  +T  Y   LQP R  AW LG  SV
Sbjct:    2 SLATKAWITSTAVLYAKFIFTSTIQGGKRFAAGTRPPEDKIFKQYNKTNQLQSFGVEKTGVNAAALEEDIRWQRIVRNDLENIPIGLLVAWGAV-------QSGGFEAVTTSAIATFTAARLFHTYAYANGLQPHRGYAWALGAASV 141          
BLAST of EWM23396.1 vs. NCBI_GenBank
Match: gi|1173957289|gb|OQS03853.1| (hypothetical protein THRCLA_03859 [Thraustotheca clavata])

HSP 1 Score: 88.5817 bits (218), Expect = 2.179e-19
Identity = 54/144 (37.50%), Postives = 73/144 (50.69%), Query Frame = 0
Query:   12 GSMLLSTLVTCTGLLYLKHVWTLTMQGGAAIKSGNRIDED-------YSKLGLNRPLEVSDVDRQQDARWRRIVANDLENIPLGLIVLWSAALASSAKESEGGIGVIVLTIVFTVARFAYTACYVFALQPWRTVAWTLGVLSVV 148
            G+  L  +  C+ LLY+K V +  +       SGNR  E+           GL+   E     R +D RW+RIV ND+ENIPLGLI  W+AAL +           IV T+VFT+ RF +T  Y  A    R  A+ LGV+ +V
Sbjct:    4 GNSHLQVVAICSLLLYIKFVASTIIGARKKFASGNRAPEETRNGDGYKQDFGLHSDDEEDQNARLEDMRWQRIVENDMENIPLGLIFAWAAALTNGNHTQ-----TIVATVVFTLCRFTHTISYANAWSKPRIAAFLLGVICIV 142          
The following BLAST results are available for this feature:
BLAST of EWM23396.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104408|gb|EWM23396.1|6.636e-117100.00Membrane associated eicosanoid/glutathione metabol... [more]
gi|1173946404|gb|OQR94942.1|6.513e-2538.16hypothetical protein ACHHYP_00822 [Achlya hypogyna... [more]
gi|954186139|gb|KRW99007.1|2.268e-2441.55hypothetical protein PPERSA_11608 [Pseudocohnilemb... [more]
gi|1173940196|gb|OQR89693.1|5.994e-2238.73hypothetical protein ACHHYP_06116 [Achlya hypogyna... [more]
gi|813163964|ref|XP_012203042.1|2.692e-2139.22hypothetical protein SPRG_08418 [Saprolegnia paras... [more]
gi|1173938124|gb|OQR88553.1|4.104e-2035.80hypothetical protein THRCLA_10247 [Thraustotheca c... [more]
gi|669147200|ref|XP_008609162.1|4.459e-2038.56hypothetical protein SDRG_05234 [Saprolegnia dicli... [more]
gi|585107564|gb|EWM25706.1|6.003e-2033.14Membrane associated eicosanoid/glutathione metabol... [more]
gi|1173947604|gb|OQR95843.1|1.164e-1936.05hypothetical protein THRCLA_07520 [Thraustotheca c... [more]
gi|1173957289|gb|OQS03853.1|2.179e-1937.50hypothetical protein THRCLA_03859 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7304rna7304Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications