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Properties
Property Name | Value |
Product | iron-sulfur cluster assembly protein |
Orig transcript id | gnl|cribi|Naga_100189g9.10216.mrna |
Orig protein id | gnl|cribi|Naga_100189g9.10216 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:275521..277870 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7297 ID=rna7297|Name=rna7297|organism=Nannochloropsis gaditana|type=mRNA|length=6244bp GGAGAACGCCGCCTTGCCCTGAAGGACATTTTAGGAAAGCATCTGTGGCA TGTTTTGGGACGGAACCACGCGACAAACTATGTCGTAGTGTAGTCAGCCT GCAATTGGTTGAGTTCTTGATGTGCTTGTCTGGTGGGATTTGTTGCAGGA ACATTTTTTCGGGCTTCCGAGGACTGAACCCATGCTTTGTTGGCCATCAA CATTGCAGTCGACGCTCAGGCCTGGGGGCAAAGCCCTGTTTTATGCCCTA CATGGGCGGTCGTACCGACTTGTCAAATCGATGCTTTGTCGCTTATGCCT CTACAGATGACGTAGGCATTCTGAGGGCAAGGTGGAAGCGTGCGTCTAAT TGAATGGACGCTGTATGAGGGTTGAAAGGGAACAGTCTCGATTCTTTGTT GAGGCGGTTAGTAACTTTCGTCCTCCGAGCTAGTGTTACTTGGCGTCGCA TTAATATATATATGCAACACTCTTATCTTACTACAAAACATTAATTTGGT AGTGTCAGCAATGGTTGGTGTGTTTTAATCTCTTAGGGTTTCCAGGTTTT GTGTTGGCGGCACCGGCATTGAACTCTGATCACATATGGATGAGAAATAA AGCAAAGCTGTTTGTACGTCTCAAACCCATATTGAGGCATGTGGCGCATT TTTGAATGTATAAAACATGTCAAACATCATACTGGCATGCGTCGTGTTGA CAGAGACAGCATTTAAGCTCCACGTTGACATATGTGGCAAGTAAAAGGAT TCACGCCCTGGAATGTGTTCTCACGAAGTCCCCTTTCCGTCCCTGATCAA ACACGTACCCCTCCAGGCAACTTGTTGAGAGTTCAGCCCTGGTAGCAACA GCAGCAGCATGGGTGGGGATGTACCAGTAGGAATAGAATCCAGTCATCAT TCAAGCGTGACGTCCCTGGAGCGAGAGTCAGACCGCGACTCTGAACAGCA GCTCTCTCCGATGGGTAGGACGGGTCAGGAGCGCAATGACTGCGATTCAC CGGAGTACCACCTTCATAAGGCGCAAAGGGACAGCATGAGCAGCGGTGAG AACAAGGGTAGTCCACCTTTTTCCTTGCTGTACAAGGGAGAAGGGGGAGA GAAGGGTGGCGGAGGAAGCCGTTCCCCAAACGAGACGTCTCCAGAGACCA GCACCTCCGCCACCTCCTCCCTCTTCGGCTCCAACTCGGCGTCAGGATCG GGCTCCGATTCGGACGGAGAAGGGAGCGGTAACAGTAACGCGGGCTTTAA GGCTGGCGAGGCTCCTGTGGGGAGCTCGGGCTCAGGAAGCCACCCTCACG GCCACGCCTCCGGCCCCCGCCCCTCGTTCTCCACACCGTCGCCGTCCCCC GCCGACTTCCTCCTGGGCCACGCGACGCCGCCGGGCAGCCGGGGCAAGGG AGGGGGCGGGAGCGGGAGTCCCTTGTTGGACGGTCCTTTCGGCGCGGACC TTTTCGGTGGTTTCCATGCTACCTCCGAGAGGGAGGGACACCGACCGCAG CCGACGGAGGGGAAGGAAGTGATAGCCCCGCAGCGACGCTCCAATTCTCT GTCCCCGCCCTTGCCTGCCCTCTCCGTGCACGAGGCCCAGAGTGTGTTTG GTTCCACGGGCGGTCTCCGTCCGGGCGCCCCGCTGACCCCGGGAGGGCTG AGCCGCCGGGCCCGAGACAAAGGCTTCCATTCCACGCCCGGCGACGGCGG GTTGGGGGCAGGGAGGGAGGGGGATGGAACGGGTATGTTCGATTTCGAGA AGATGGAGTACGAGCTGGCGGGTCTGGCCCGGAGAGGGGAAAGGCGGCCG GAGCCAGGGAGTTCGGAGCAGGACGGGCGAGGGGAGACACCCCGGCAGAC ATCAGAAGCAATGAGCAACGGTGGTCGAGGGCGGACCTTTGCCTCATTTG CACCGGCGGAGAGCCCCACGGAGGGCCTTCGCCACGCGAACAACTATGCC TCGTCATCTGCCTCCTCACCGTCCCCCTCCCCCTCCCCCTCCTCTCTCGC CTCCTCCCGCTCCTCGCCCTCGCCCAACTCCTCTTCCAGCACGATCCAGC CCATGGCCTTCTCTGGGAGCGGCGACGTCAGGGCTGAGGCTTCGCCGCTC GGCATGGCTGCGGGCTCTCCCTACCTGCTCCAGCAGCCGGGCTTCCCCTT TGGGAGCGTGACGGCCCCTGGCGATGGCTTGCAGGGGTACATACAGTCAG CGGCCAGCCCAGCTTCGGGCGCCAGAGCGTCTTCTTCCCCTAGGCCCGGA CGGACAGAGGAAGGGGCGGGGATGGTCTTTGCCTACGGCCCCCATTCTCC GCTCGCCCCGGACAACCGAGTGTTCGGGCCCCCGGGGGGAGCGACCTTGC CGACGCAGGTCCACATCCCGGTGGGGGCAGAGGGGCCGGTGGCCATGTTT CCTGCAGCCTTTGAGCAGCAACAGCAACAGCTTCAGCAACATCAGACGAC GGCCGTGGGGAATGGTTTGCCGACGCATCTCATGACCACGGCGGGTCTGA TGCCGTTGAGCCAGATCATCGCGTTGCATCAGCAACACCAATTTCAACAG CAGCAACAGCAGCGAGACAAGGGAGGGGCTGCTCTGCCCGCGAATCTCCC TTTCTCCCACATGACCCGAGGTATGGGGAAGACGGCGGGAGGGAGCGGCA ATTTCAACGGCGCCGCCCACGGCAACCACGCCGGCGCGACCTTGGACAAT ATGGGCCACGGCGGAAGTGATTTCCCTGTATTGGTGGCGGGCAACACCAG TGTACACCCTGAGGGATCCTCGCATCCAGCGATGCTCTTGCATCCGACAC GCCAACGCCAAGTGGGAGAGTCGCAAAACCCGCAACGGGCCTCGTTTGGC AGGACAGGCGCCAACCTGAATGCCCACGACACGTCGGGCTCTCCCTCGAC AGCCTCGCCCACTAGGAATCTGGACCCGTACGACGTGTTGTACTACGGGG GTACGGGTCCTGAGGTCAGGCAAGGCCTGGGAGGATTGTACGGCTCTGGG GGGGGGACGCGCCGAGGCGGAGGCCGGGACCGCAACGACCGACGGGGCTT TGGAGGGAGCTTGAATGGAACAGGGAATAATGGCGGGGCAACATTAGGGG GAGGCTCCTCTGCTGCAAATTTGAGCGGATTGTTAGCGAACTTGGGGTCT TTGGGCGGAGGAATGGCTGGTCTGGGCCTGGAATCACTTTTGTTGAACGG CGTGTCCTCTCCCGCGTTGAAAAAACGCGTGGAACGTGACCCGGATATAT TGGCAGCATTGGCCTCGGCCACGCCCTCCCTGGAAGAGATTTTGAAGTCG TCGACGGTGCAGAGCCTTAGTCAGGATCAAGTCGGCTGTCGCTTTTTGCA GCTCAAGTTGGACGAGGCAGGCGCGGAGGCCGCCACCATCATCTTCCAGC AAGCCAAGCCCTGCATGGCGGAAATGATGACGGACCCCTTTGGAAACTAT TTGTTCCAGAAGATTCTGGACAAGACAAGCGAGCAAGAGCGCGCGACCAT CCTCTCCCTGGTGCAGGACGAATTGGTGAGCGGGGCCTTGAACTTGCACG GCACGCGGTCTGTGCAGCGGATTTTGGAAGTGTGCAGGACCAAGGACCAG GTAGCGACCATCACCGCCGCCCTTCGCCACGACGTGGTGCGGCTGTGCGT GGATGCCAACGGGAATCATGTCATCCAGCGTGCGCTACAGCACTTAGGCT CGGAGGACCGGGCTTTCATTTTTGAGGCGGTCTCCCAGGCCTGTCTGGAG GTGTCCACGCACCGGCACGGTTGCTGCGTGATGCAACGCTGCCTGGACGC GGCAACACCCCTTCAACGCCGAGCTTTGGTCGTGGAAATCGGCCGAAATT GTCTGCAATTGATGCAAGATCCCTACGGGAATTACGTGGTGCAGTACGTC CTGGACAGGTGTGCGGCGGATGAAATCCGTCCGGTGACCTCCTGTCCCTT GGGGCGCATCACCTCCTTGTCCGTGCAAAAATATAGCAGCAACGTGGTGG AGAAATGCTTGGAGAAGGCCTCTGAAGACATCCAGAGCGCGTATATTGAC GAAATGTGCGCTCCAGGAAACATCAAACACCTGATGCAGGACCAGTACGC GAATTACGTGGTCCAGCGTGCTCTGTCGGTAGCCACCCACTCCCGAGGAT TGCACCTGGTGGAGGCAGTGCGCCCGCATTTACATGCCATGCGCAATACG GCGGGGGGGCGGAGGATTTTGTCTAAAATCACCAAGAGGTTCCCAAACGT GGATCTTGGAGCGGACATGATGGCAGGGGGCGGAGCGGGAGGCACGGTGG GCAATAGTGGGGGTCCAGGGGGCTACGTCTCGGGGATGAATAATGGGCAC GGCTCTATGCACCATCCTGGACACATGCATGCATTGCACGGCAGTGGCCA CCCGCCCCCTGTGCAGCACCACCCCCACCACCAGCACTCGCACCCGCATT TGGGGTTCCACCAGCACCGTTCGAACCAACCGCAGGCGCACTTTGGCGGG CATCACAGTGGATTCCGCTAGGAGACGTCTGAAAGCAGGACAGACGCGCG AGTGAAGAAGGCTTTCCGGGCGAGAAGATCGTGCGAGGGGGAAAATGGAT GAAAACTTACGCTGCGTAAGTTTTGATGACGCTGCTGAGAGAAAAGATCT GTATATCCATGGATGCAGGAGATGTTCACGTTGTAGGCGCGTCGAGACCT TCGCACGGAGGGTACAATATAAGGGGCTGTAGAATATGTATCAGTCCTAT ATTATTTTTAAGAATATAGTTTTAAGCATACACGGATTTACGTCCTATAG CCGGGGGTCTTGAAGACGCGTGGGCAAGGAAGATATTCTGAAGGGAAATT GCGGTTAGGAAAGGGGCCAACAAGCAGCAAATCGAGCGGGCAGTTATGAG ATGAATAGGAGCAGTGGTGAAGAATATTGCAGTGCAAGTCGGGAGAGAGA TTTACTTCGTCTCCATGACCGACTTCCTTCCTGCTATTTCCTCTCCAATT GTGATTGCGTGGTGCAGTCACAAACTTGCTTTCAGCTCATAGGGAGTACT CGAATATATGAATATAATGCGTCTGATATTGGAAATGGTATATGGAAACA AAACGAGCGCTGTCGGACACAGACTTCACAAAATGTGCATCTTGCGGGAT AGCAGGCGCATGGCCAGTCATATGATTCATGCTTCTGTGATCCTGTGGCT CGAAGCTTCTCTGAGAAGTGAAGGATCAAAGACTGGAGGCAGGAGGGGCA TGTCATGGCCTCTATGTTCAGTTGTGGTATGTATGTCGCGTGCGGGTCGC AGCGTCTACGTCGGATTCATGAGTTTGTAGGGACATACATCAATTTTATT TCCGGTTGACCTCGCATATTAGGCAGCAAGGAAGTGGTGTATGGAAAGAT GAGCGCGGTATAAATTTTCGTATTTATTGTACTAGAGTATTTTTAAGTAA TAGGCAATTGCCAGTCTCATCTTGTTTGTCTTCGCCTGAAGCCTCTGCGC CGAAAGGACACGAGGGAGGCGTAGTAGGAGTCAAACCAATCTTTGAAATT GCTTGAGTCTATGCACATAGCTGGCGACGTATTTTGGAGCATACGAAGGT TTTCATAGCGAGGCAGTGAGAACGAAAGAAAGAAAAGAGAGCATGCAGTA CAAAAGAACAGAGGACGACGAATGCGGGTATCCAGCGGACGGCGGGGACA AGTACGTGGAAAGAAGAGTGTGCGTGGTGGTGGGATCAGAAAGACTTCTA CGCAGTAGAATATTGGCAATGATACATGTCTGTAGACGTAAGGGCCGCCA TGCTTGGAAGCAGGGAAGGGGAGAGTGCAACAGAAGAACAGGAGGGAACT ATAAGATGAAGAGGGGCACTCTCATTCCCGCCTCTTTACTGGGCACCGTT AAAATATACATCAACCAAAGAGAGCTGTTTAACTACAAATTGAAAAAGGA TTATTTAATGCTAATGACGACGACTAGACGAGCAGAAGACAAGACAGCAA TGACGCGAAGACATGACCGGGAAGCAATTTCGTGAAGCTAGAGATATTCA TTGGTAAGGATAAAGAACAGCTTACGTGCCACGGTTTACGAAACGTGCCA CGGTTTACGAAGTATGCCCTTCACTTGAATCGACTTTTCTATACCCGTTG CTCTTTAAAGCTAGTACGGGCTGACGGACGACTTCTTATCTTGAAAAGGG CATTCAAAGTGCACAGACTTGAGAATCAATATACTCAGCCCCTC back to topprotein sequence of rna7297 >rna7297-protein ID=rna7297-protein|Name=rna7297|organism=Nannochloropsis gaditana|type=polypeptide|length=518bp MRRGPLRRMMTPTSTFLSLLLGSTLVSEQQLLTRAFLVPAALQNPSTLVL YHSPPSSSAAETVTRPAPLQVGAAESPGNVASGVAADDNVPEGHKGLHEF LYGDDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVY DASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAV QASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADT KTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDW SGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPS SSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRL QGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLT ERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKM GVVYALKGMQGVTNVHVV back to topmRNA from alignment at CM002471.1:275521..277870+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7297 ID=rna7297|Name=rna7297|organism=Nannochloropsis gaditana|type=mRNA|length=2350bp|location=Sequence derived from alignment at CM002471.1:275521..277870+ (Nannochloropsis gaditana) gcgggcaggACCTTTATCCAAGTTTTTTCCCCCCACGCCGTTGGCCGAGC
CACAAAACGTGTAGATACCGAATGAAGGCCCAACCGTCGCAAATCAAAGC
CTTTTAGAGATGCATTTGCACTCGCCTTCTTAGAACTAATTTGTACTATG
TATGTAACATTGCCCCCTCCATTTCATGACTTTTGACCCTACAGCAGCTC
CGCGACTTCGCTTTGatgaggagagggccgctGCGAAGGATGATGACGCC
CACCTCGACCTTCCTATCCCTCCTGCTTGGGTCCACCCTTGTATCAGAGC
AACAACTCTTGACTCGAGCTTTTTTGGTACCAGCAGCACTTCAAAACCCA
TCAACCCTAGTCCTGTATCATagtcctccatcttcttcggcCGCAGAAAC
AGTCACACGCCCGGCACCCTTGCAAGTAGGCGCTGCCGAGAGCCCGGGCA
ACGTCGCGTCCGGAGTGGCCGCAGACGACAATGTTCCAGAAGGTCACAAG
GGGCTGCACGAGTTTCTGTACGGCGATGACGACGCCCACGGTACGAGGGC
ACCGCCTGCGGGAAGCACGTCGACTTCCTTCACCCGAGCCCAaggccctt
tccctgccgcATCTTTCCTGAAAGACTTGCAGGATACCCGCTTGGCGGCA
GTGTACGGAGTGTACGACGCTTCGGGGACCTTGCGGTACGTGGGAGTAAC
CCGCAACGTGGTGATGGCCTTGGAAGGGCATTTGCAGGCGCACGgtccgg
aggtggtggcctccgTGGCGTTGGAGAGCTTTCGATACCCCaagcgggag
gaaatggcggccGTGCAAGCGTcctggctggaggaggtggcggcaaCGGG
GCAAAATCCAGAGGGGAACCGaagcgtgggggagggcggctccGGGGGCT
GGGCAAAGTCGATAcgagaggtggtggagtcGGGGGCCGGGCTGGGCGGG
GCGCACGCGGACACGAAGACCAAGCTGAGGACAGCTATGGCGGACCCGAC
CTTGCGGGACGAActggaggacctggacgaggaggaggagtatggggagg
aggcagaagcaGCGCGTTCGGCGCGGCGGGCGCAACTGAAGGCGGCTGTG
GAGGAGAGTGACTGGAGTGGCATGATCGAGGGGCAGACCCGGTCCACGAT
CCCGGAGGGCACGCGGGACGCGgctgccaaggagggaggtggggagatCA
CCAGTCCCtttcgggagggaggggcgggatccccctcctcccctccgccg
gcgtcgcccccgtcatcctccctccccgcggaGGACACGCTGGAGCTGAC
GCCGGAAAATGTGGACCGCGTCCTTGAGGAAGTCCGGCCTTACTTGATCG
CAGACGGGGGCAACATCGAGGTGGTGCGTATCGACCTGGCGGACCGGGac
attttcctccgcctgcaaggGGCCTGTggctcctgcccgtcctccacgac
caccaTGAAGATGGGGGTGGAGCGGGTCTTGCGGGAGAAATTCACCCAGC
TGGGAAGTGTGGAGGCGGTCTCGGACGCGCCCCTTTCTGTGGACGAGACG
GGCACCCCCTTGACCGAGAGAGCCGCCTTGGAACGGAAattggaggaaaa
attgaGCGAAATTTTGCCGGCCATCCGGGGCTTgggggcctccgcctcga
ttGGGGgcgtgagcgaggagggggtggtaAAGCTCGTATACCAGGGCCCA
GAGAAAGTGAAAATGGGCGTGGTTTACGCTTTGAAAGGCATGCAGGGGGT
CACGAATGTGCATGTAGTCTAGGGCGACGGGCGGAgccaaggcgggcggg
ggacgaccggcgcgagggagggcggaaaagcAAGCACGCGCGCAAGGAAA
TGCCCTGCTTGGATGAAAGGACAGCCAGTAGGGCGTTACATAACACAGCC
AGCCATTCCGTGGGATACCACGGTCGTAGTCGGGGGAACAGAAGCCGGTT
GCCTCTGACACAGCCCGGCCTAACATGAACCCTGCGTCCGGTCCGCGGGC
ACACCTTTATCCATGAAAAAATTGATATAATCACGCAAACAATTACTTTC
ACGAAACTTAGAAGTTTCGAGGTGGTGGCTATACACACAGTACTTTCACA
TGCTAAGCTGACtcaaccctccccccgcgtgGTCGACACGACCCGACCCC
CAATCCTtgcctctcccgcctctcaGGGCGCGAGAGACCGCGCTCCGGCG
GAGAATCTAGGATCACCGTTTTCAGCTTGAGGTGCAGGGCCGAGGCCGGC
ACCAGCATGGAGGTGGCTCGGGAAGCAGCGAGAGAAGTCGGAGATGGGAG
AGCCCGGCATGTCATCAGCGGGCGTGTGTGGACCGGGCGGGGGCCGCCTC
back to topCoding sequence (CDS) from alignment at CM002471.1:275521..277870+ >rna7297 ID=rna7297|Name=rna7297|organism=Nannochloropsis gaditana|type=CDS|length=1557bp|location=Sequence derived from alignment at CM002471.1:275521..277870+ (Nannochloropsis gaditana) atgaggagagggccgctGCGAAGGATGATGACGCCCACCTCGACCTTCCT ATCCCTCCTGCTTGGGTCCACCCTTGTATCAGAGCAACAACTCTTGACTC GAGCTTTTTTGGTACCAGCAGCACTTCAAAACCCATCAACCCTAGTCCTG TATCATagtcctccatcttcttcggcCGCAGAAACAGTCACACGCCCGGC ACCCTTGCAAGTAGGCGCTGCCGAGAGCCCGGGCAACGTCGCGTCCGGAG TGGCCGCAGACGACAATGTTCCAGAAGGTCACAAGGGGCTGCACGAGTTT CTGTACGGCGATGACGACGCCCACGGTACGAGGGCACCGCCTGCGGGAAG CACGTCGACTTCCTTCACCCGAGCCCAaggccctttccctgccgcATCTT TCCTGAAAGACTTGCAGGATACCCGCTTGGCGGCAGTGTACGGAGTGTAC GACGCTTCGGGGACCTTGCGGTACGTGGGAGTAACCCGCAACGTGGTGAT GGCCTTGGAAGGGCATTTGCAGGCGCACGgtccggaggtggtggcctccg TGGCGTTGGAGAGCTTTCGATACCCCaagcgggaggaaatggcggccGTG CAAGCGTcctggctggaggaggtggcggcaaCGGGGCAAAATCCAGAGGG GAACCGaagcgtgggggagggcggctccGGGGGCTGGGCAAAGTCGATAc gagaggtggtggagtcGGGGGCCGGGCTGGGCGGGGCGCACGCGGACACG AAGACCAAGCTGAGGACAGCTATGGCGGACCCGACCTTGCGGGACGAAct ggaggacctggacgaggaggaggagtatggggaggaggcagaagcaGCGC GTTCGGCGCGGCGGGCGCAACTGAAGGCGGCTGTGGAGGAGAGTGACTGG AGTGGCATGATCGAGGGGCAGACCCGGTCCACGATCCCGGAGGGCACGCG GGACGCGgctgccaaggagggaggtggggagatCACCAGTCCCtttcggg agggaggggcgggatccccctcctcccctccgccggcgtcgcccccgtca tcctccctccccgcggaGGACACGCTGGAGCTGACGCCGGAAAATGTGGA CCGCGTCCTTGAGGAAGTCCGGCCTTACTTGATCGCAGACGGGGGCAACA TCGAGGTGGTGCGTATCGACCTGGCGGACCGGGacattttcctccgcctg caaggGGCCTGTggctcctgcccgtcctccacgaccaccaTGAAGATGGG GGTGGAGCGGGTCTTGCGGGAGAAATTCACCCAGCTGGGAAGTGTGGAGG CGGTCTCGGACGCGCCCCTTTCTGTGGACGAGACGGGCACCCCCTTGACC GAGAGAGCCGCCTTGGAACGGAAattggaggaaaaattgaGCGAAATTTT GCCGGCCATCCGGGGCTTgggggcctccgcctcgattGGGGgcgtgagcg aggagggggtggtaAAGCTCGTATACCAGGGCCCAGAGAAAGTGAAAATG GGCGTGGTTTACGCTTTGAAAGGCATGCAGGGGGTCACGAATGTGCATGT AGTCTAG back to top
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