EWM23395.1, cds7280 (CDS) Nannochloropsis gaditana

Overview
NameEWM23395.1
Unique Namecds7280
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:275736..277292 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23395.1
Productiron-sulfur cluster assembly protein
Orig transcript idgnl|cribi|Naga_100189g9.10216.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:275736..277292 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005506iron ion binding
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0016226iron-sulfur cluster assembly
Vocabulary: INTERPRO
TermDefinition
IPR001075NIF_FeS_clus_asmbl_NifU_C
Homology
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|585104407|gb|EWM23395.1| (iron-sulfur cluster assembly protein [Nannochloropsis gaditana])

HSP 1 Score: 1038.1 bits (2683), Expect = 0.000e+0
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0
Query:    1 MRRGPLRRMMTPTSTFLSLLLGSTLVSEQQLLTRAFLVPAALQNPSTLVLYHSPPSSSAAETVTRPAPLQVGAAESPGNVASGVAADDNVPEGHKGLHEFLYGDDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALKGMQGVTNVHVV 518
            MRRGPLRRMMTPTSTFLSLLLGSTLVSEQQLLTRAFLVPAALQNPSTLVLYHSPPSSSAAETVTRPAPLQVGAAESPGNVASGVAADDNVPEGHKGLHEFLYGDDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALKGMQGVTNVHVV
Sbjct:    1 MRRGPLRRMMTPTSTFLSLLLGSTLVSEQQLLTRAFLVPAALQNPSTLVLYHSPPSSSAAETVTRPAPLQVGAAESPGNVASGVAADDNVPEGHKGLHEFLYGDDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALKGMQGVTNVHVV 518          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|545710673|ref|XP_005707644.1| (iron-sulfur cluster scaffold protein [Galdieria sulphuraria] >gi|452824119|gb|EME31124.1| iron-sulfur cluster scaffold protein [Galdieria sulphuraria])

HSP 1 Score: 254.988 bits (650), Expect = 1.134e-75
Identity = 167/438 (38.13%), Postives = 236/438 (53.88%), Query Frame = 0
Query:   81 ASGVAADDN-VPEGHKGLHEFLYGD-DDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAG-----LGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALKGMQG 511
            +S    DDN +PEGH+ LHE LY   ++ H T   P+       +      P   FL  ++D ++ AVY VYDA+  +R++G++R+V  AL+ H +A     VA + L+++ +P+R EM   Q  W+ E+  T   P GN +  E  S  WAKSI+E  +  A          + + K KLR AMADP+L DE              E+     R     A+ E DWS +IE Q+   + +             +TSPF      + ++       S+S  AE    LT ENV+ VL+EVRPYL +DGGN++V+ +D  +R++ L LQGACG+CPSSTTTMK+G+ER+LR++F  +G + A S+   SV  T  PL ER       E  L EI PAI GLG S S+  V E   V L+YQGP+K+K G+  ALK   G
Sbjct:   51 SSNYIIDDNSIPEGHRSLHETLYSRGEEEHKT---PSKQQVKFRSDGSNWLPVDLFLNGMEDEKVGAVYAVYDANRDIRFIGISRDVCFALKAHREALSDRDVAWLRLKTWDFPRRVEMEQCQKDWIAELGFT---PPGNITTNE-ESKLWAKSIKEATQLVASDVEPERKSTYEEKKFKLRKAMADPSLIDE--------------ESREIFERDPTIHAISEGDWSKVIEQQSNKVLQDA------------VTSPFESVEVVANNN--RVDERSNSNTAESGSFLTVENVNLVLDEVRPYLESDGGNVKVLSVD-TNRNVVLLLQGACGTCPSSTTTMKLGIERILRQRFPNIGEIVAQSEVA-SV--TTIPLEERC------ESLLEEIRPAIIGLGGSISVSRV-ENNQVFLLYQGPDKIKYGIELALKEKLG 442          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|873235075|emb|CEM00986.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 252.677 bits (644), Expect = 6.559e-74
Identity = 177/476 (37.18%), Postives = 250/476 (52.52%), Query Frame = 0
Query:   64 TRPAPLQVGAAESPGNVASGVAADDNVPEGHKGLHEFLYGD---DDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLG--GAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKE--------------GGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPE--KVKMGVVYALKGMQGVTNVHVV 518
            ++P+P+    AE P    S +  D NVP+GH+GLH FLY D   DDAH   A PAGS           +    +L   ++ R+  VY V D   +++YVGV+RNV +ALE H +   P  VA V ++S+ YP+REEM A++  W+ E   +G+ P GN    E  S G+A++I++    G        + D K KLR AMAD TL DE  ++ EEE    EA          L  A+++ DWS +I+GQT +T+     +A  +E              G   + SPF  G  G  +     + P+ SLP      LT +NVDRVL++VRPYL ADGGN+ VV +D   + I L LQGACG+CPSS  T+KMG+ER+L+E +  L  V  VSD P S      PL     L   +E  L E+   + G+GAS  +   +++G   L Y GP+  ++  G+   LK       + VV
Sbjct:   70 SQPSPVDELIAEQPS--LSPIQTDANVPDGHRGLHSFLYDDGKEDDAHA--AKPAGSRGRVRFDGVNMYGVDRWLGMHREERVCGVYSVLDEDRSVQYVGVSRNVAVALESHRRQTPPGTVAFVRIKSWDYPRREEMDALRDEWIRE---SGRVPPGN----EDASLGFAETIKDASTDGMKDDERQQYHDNKLKLRRAMADNTLIDETPNIIEEEIMNREA----------LLHALKDDDWSAVIDGQTNATLNPQLINAQLQEALKIGRDDTSTDTQGEANVVSPFAPGRQGDDAVAARTAEPAESLP------LTVDNVDRVLDDVRPYLQADGGNVMVVAVDPTHKTISLALQGACGNCPSSQMTLKMGIERLLKETWPDLNDVVPVSD-PSSPHAAPAPLPFGVEL---IERHLEEVRWGLNGMGASCDVIE-AKDGRAVLRYAGPDPGRITFGIELMLKDAVPNNQLQVV 513          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|298706477|emb|CBJ29464.1| (iron-sulfur cluster assembly protein, similar to nifU [Ectocarpus siliculosus])

HSP 1 Score: 237.269 bits (604), Expect = 2.007e-68
Identity = 165/437 (37.76%), Postives = 232/437 (53.09%), Query Frame = 0
Query:   87 DDNVPEGHKGLHEFLYGDDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGA-GLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTI-PEGTRDAAAKEGGGEITSPFREGG----AGSPSSPPPASPPSSSLPAE-----------DTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYAL 506
            D +VP+ H+GLH+FLY +++ HG     A   S         +  + +LKD  +++ AAVY V      + +VGV RNV ++L  HL A G  +V  + + SF++PKR++M A++A W+EE    G  P GN    E     WA   ++   + +     A+ + K K+R A+ADP L +E E +  E+            RR +L++AVE+ DWS +I+GQT+ T  P+   DA        I SPF   G     G      P  PP  + P             + LE T ENVD+VL+EVRPYLIADGGN+ V+ +D+  R + L LQGACGSCPSSTTTMKMG+ERVL E F  +G VE V +A      +G  + E  A    +E  L  + PA+  + A   +  V  +G VKL Y G  KV  G+  AL
Sbjct:   77 DRDVPQAHRGLHDFLYSNEEDHGA---TASDGSVELFDGTQLYEVSKWLKDNAESKHAAVYAVVGKDEKVNFVGVGRNVALSLAAHLAAEGESMVHMLKVRSFKFPKRDKMEALKAQWIEE---CGSTPVGNIKGSE-----WATGSKDAQNAMSPAQKEAYEENKLKMRKAIADPGLVEETEQMSSED----------IERRKRLESAVEDDDWSSVIDGQTKLTEEPKVEVDAPT----ATIISPFSSDGMPVGVGPDGMAAPPLPPGIAAPVPDAPPTPPASECNDLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMGIERVLNENFLNMGGVEQVDEA------SGNAMAE--ATTAVVEAILEPLRPAMVAMRAKVEVLSVL-DGHVKLTYSGHRKVAYGIQMAL 479          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|148907013|gb|ABR16650.1| (unknown [Picea sitchensis])

HSP 1 Score: 223.787 bits (569), Expect = 1.222e-63
Identity = 170/492 (34.55%), Postives = 244/492 (49.59%), Query Frame = 0
Query:   41 ALQNPSTLVLYHSPPSSSAAETVTRPAPLQVGAAESPG-NVASGVAADDNVPEGHKGLHEFLYGDD--DAHGTR-----APPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPK---REEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGE----ITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEG-VVKLVYQGPEKVKMGVVYALKG-MQGVTNV 515
            ALQ  ST +  H+  S + + ++ + A L+   A++P  +  S V  D++VPEGH GLH FLYG+   + HG++     A P     +S        P   ++    +   A VY +Y+    ++YVG  RNVVM+L+ H+   GP    SV ++ F  P    R  +   +  WL+E       P GN +  +    G   SI+ + E        + + K KLR AM +  L DE+E  DEE           S RR  L  A E  DWSG+I+ QT+ T+ E   +        +    I SPF + G  +           S L +  T +LTPENVD VL +VRPYL+ADGGN+EV  ++  D  I LRLQGACG+CPSSTTTMKMG+ERVL+EKF        V      VD+     T  +     +   L  + PAI   G S  +  +S EG +  + Y GP+++ +G+  A+K     +TNV
Sbjct:   21 ALQ--STAIKIHTRLSYACSSSLPKSANLKATHAQTPSLDSLSTVVTDESVPEGHAGLHGFLYGEKGSEVHGSQTQQITAKPGEDDGSSI------IPFEDYVNTRGNLNFAGVYAIYNNEDQIQYVGYARNVVMSLKSHMDKVGPSRCCSVRVKIFTDPSLLSRGRLEQEKNKWLDEYGL----PPGNSTDQDLWDCGRVLSIKAMSEEERK---DYEEKKLKLRKAMGE-NLYDEVEGEDEES----------SIRRLNLLRATEGDDWSGVIDRQTKETLEEKCEETQNNNNNEQTNAGIASPFSDNGKST-----------SGLYSAVTHDLTPENVDLVLNDVRPYLVADGGNVEVASVE--DGVISLRLQGACGTCPSSTTTMKMGIERVLKEKFGD------VLKEIRQVDQQNIHATVVS-----VNSHLDMLRPAIHNYGGSVEV--ISIEGEICHVKYNGPDQIGVGIQAAIKDKFPEITNV 460          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|1026761407|gb|OAE22888.1| (hypothetical protein AXG93_3544s1000 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 192.586 bits (488), Expect = 1.080e-51
Identity = 163/448 (36.38%), Postives = 219/448 (48.88%), Query Frame = 0
Query:   82 SGVAADDNVPEGHKGLHEFLYGDD--DAH--------GTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPK---REEMAAVQASWLEEVAATGQNPEGN---RSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSAR--RAQLKAAVEESDWSGMIEGQTRSTI--PEGTRDAAAKEG-GGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSE-EGVVKLVYQGPEKVKMGVVYALK 507
            SGV  DD VPEGHKGLH FLYG+   D H        G +    G+T   F           ++   +  + + VYGV++++G L +VG +RNVV++L+ H    G E  ASV ++ F       R ++   +  WL   A   + P GN     + EG S   A  ++ + E        + + K K+R AM              E  Y +       A+  R +L  A E  DWS +I+GQT+ TI  P    D    E    +I SPF     GS             L + D+ ELT ENVD VL EVRPYLIADGGN+EVV   L D  + LRLQGACG+CPSSTTTMKMG+ERVL EKF +  S++ V    + VD+      E  A    +   L  + PAI   G S  +  VS   G V + Y+GP  + MG+  A+K
Sbjct:   78 SGVVTDDAVPEGHKGLHGFLYGEGGADIHTSGIKEFAGRQGEDDGTTILGFEE---------YVAAREAVKFSGVYGVHNSNGGLEFVGYSRNVVLSLKTHRARVGAEKCASVRVKLFSVASIVSRAKLEEERKMWLMFAA---EIPPGNSHENHLWEGSSA--AAPLQHMTEEERK---EYEEKKLKMRKAMG-------------ENLYDDVDGEDDDAKTIRMKLLQATEGDDWSSVIDGQTKQTIKPPPIAFDEVVDEAPAAQIVSPFSTSSKGS-------------LYSADSYELTVENVDIVLNEVRPYLIADGGNVEVV--SLTDGVVSLRLQGACGTCPSSTTTMKMGIERVLNEKFGE--SLKGV----VQVDQ-----QEIGATLGGVNSHLDMLRPAIINYGGSVEVVSVSPCRGEVVVKYKGPAPIGMGIQAAIK 469          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|1189392064|gb|OSX78983.1| (hypothetical protein BU14_0093s0026 [Porphyra umbilicalis])

HSP 1 Score: 184.111 bits (466), Expect = 7.354e-50
Identity = 140/364 (38.46%), Postives = 182/364 (50.00%), Query Frame = 0
Query:  158 YVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTL----RDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALK----GMQGVT 513
            +VG++RNV  A+  H+   G    AS+ ++++ YP R EM A +  WL + A     P GN     G +     S    V +  G     A+ K KLR AMAD TL                          ARR+ L +AV E DWSG I+ QT +T+       A         +      A   ++ P    P+ + P   TLELTP+NVDRVL++VRPYL++DGGNI VV +D     + LRL+GACGSC SSTTTMKMGVERVLRE F  LG V AVS+AP       TP    A     +E  L  +  A+ GLG S S    +  G V L+Y GP K+  G+   L+    G  GVT
Sbjct:    2 FVGISRNVQAAVRAHVATRGRTEAASLVVKTWDYPSRSEMDACRDEWLADAAP--DVPPGN-----GAAAQQWASSARDVSAVLGRDAGEAEKKLKLRKAMADMTLVDEAEAADRAAAAAAAAAGGTGGEADARRSNLVSAVTEDDWSGEIDAQTAATLSPPRAAPAPAAPPVAAPAVVSPFAAAPSAAGPATGAPAPAAPGAPTLELTPDNVDRVLDDVRPYLLSDGGNISVVSVDARSAAVVLRLEGACGSCASSTTTMKMGVERVLREAFPGLGDVSAVSEAP------ATPFGVAA-----VEAALDNVRGALNGLGGSVSC-LTAANGEVVLLYSGPPKLAYGIELMLRDSVPGTMGVT 346          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|545366069|ref|XP_005647957.1| (NifU-domain-containing protein [Coccomyxa subellipsoidea C-169] >gi|384249933|gb|EIE23413.1| NifU-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 184.496 bits (467), Expect = 2.794e-49
Identity = 162/454 (35.68%), Postives = 213/454 (46.92%), Query Frame = 0
Query:   84 VAADDNVPEGHKGLHEFLYG-------DDDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPE--------VVASVALESFRYPKREEMAAVQASWLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHA----DTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGAGSPSSPPPASPP----------SSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKF-TQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALK 507
            +A D NVPEGHKGLH FLYG       DD+    +        TS        P   +L   Q  +   VY +YD+   L+YVG  RN+ MA++GH    G E        VVA+ AL S     R  +     +WL E    G  P GN         G  + + E     +GL  A      +   K+R AM +  L D++         GE  ++ +  RR  L  AVE  DWS +I+GQT  TI                     + G G+ +   PAS P            S PAE T +LTPE+V+  L+EVRPYLIADGGN+EV  I  +D  ++LRLQGACG+CPSS  TMKMG+ER L+  F  +L  V       L VD T T     A+    ++  L  + PAI   GAS  +  VS  GV K+ + GP  + MGV  A+K
Sbjct:   24 IATDSNVPEGHKGLHGFLYGESGAEVHDDEGRDYQTREGEDDGTSL------VPVERYLAVRQGEKPLGVYALYDSRRNLQYVGYARNMTMAIKGHAGRVGEERCAYVRALVVANRALMS-----RGHLEEQANNWLAE---AGTLPPGN---------GVERDLWEGTTPVSGLPAADVAVLEERALKMRKAMGE-NLADDVA--------GESVDSKQ--RRLNLIRAVEGDDWSSVIDGQTAQTI--------------------EDSGNGAEAPTHPASTPFARASVHRSIGDSAPAE-TPDLTPESVNAALDEVRPYLIADGGNVEVASI--SDGVVYLRLQGACGTCPSSAGTMKMGIERALQGAFGDKLKGV-------LQVDATST-----ASDLASVDAHLDMLRPAIASYGASVQVLSVS-GGVCKVQFGGPPPIGMGVQAAIK 407          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|971511916|dbj|GAQ86272.1| (NFU2/3, Fe-S cluster assembly protein [Klebsormidium nitens])

HSP 1 Score: 177.948 bits (450), Expect = 3.597e-46
Identity = 153/450 (34.00%), Postives = 216/450 (48.00%), Query Frame = 0
Query:   84 VAADDNVPEGHKGLHEFLYGD------DDAHGTRAPPAGSTSTSFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYP---KREEMAAVQASWL-EEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGE------------ITSPFREGGA---GSPSSPPPASPPSSSLPAEDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKFTQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSE-EGVVKLVYQGPEKVKMGVVYALK 507
            V +D  VPEGHKGLH FLYGD      DD    +        ++    Q       +L   +  R   VY VYD  G L+Y+G +RN+V+ L+ H    GPE  A V ++ +       R  +   + +WL ++    G  PE  R + EG   G A ++    E GA     + + K K+R AM +  L D +E        GE+A+A    RR +L AAVE  DWSG+I+GQT+ T+       AA                  I SPF    A   G+P++  PA+             ++ E+VDRVL+ VRPYLIADGGN+EVV ++  D  + LRLQGACG+CPSST TM+MG+E  L+  F       A     + VD+     T  A     +   L  + PAI   G S  +  V   +G   + ++GP  + MG+  A+K
Sbjct:   86 VVSDAAVPEGHKGLHGFLYGDAGADVHDDGAAFQVRGEEDDGSALVGLQ------QWLAGREAERPPGVYAVYDQGGDLQYIGYSRNLVLTLKQHRARVGPERSAGVRVKVYANAALVSRARLEEERQAWLAQQPVPPGNGPE--RDLWEGT--GPATAVMTEAERGA-----YEEKKLKMRKAMGE-NLYDAVE--------GEDADA--RTRRLRLLAAVEGDDWSGVIDGQTQETLAPPQAQRAAAAAAAIEAAKAAVAAKPQIVSPFARPNAPALGAPAAEKPAT------------VMSVESVDRVLDGVRPYLIADGGNVEVVGVE--DGIVALRLQGACGTCPSSTATMQMGIEAALKAHFG------AALQQVVQVDKQDIGATLEA-----VNSHLDILRPAITNYGGSVEVLAVDTLKGSADVRFKGPAPIGMGIQAAIK 484          
BLAST of EWM23395.1 vs. NCBI_GenBank
Match: gi|760445509|ref|XP_011399823.1| (NifU-like protein 1, chloroplastic [Auxenochlorella protothecoides] >gi|675354435|gb|KFM26875.1| NifU-like protein 1, chloroplastic [Auxenochlorella protothecoides])

HSP 1 Score: 172.94 bits (437), Expect = 6.223e-45
Identity = 148/437 (33.87%), Postives = 206/437 (47.14%), Query Frame = 0
Query:   87 DDNVPEGHKGLHEFLYGDDDAHGTRAPPAGSTST-SFTRAQGPFPAASFLKDLQDTRLAAVYGVYDASGTLRYVGVTRNVVMALEGHLQAHGPEVVASVALESFRYPKREEMAAVQAS---WLEEVAATGQNPEGNRSVGEGGSGGWAKSIREVVESGAGLGGAHADTKTKLRTAMADPTLRDELEDLDEEEEYGEEAEAARSARRAQLKAAVEESDWSGMIEGQTRSTIPEGTRDAAAKEGGGEITSPFREGGA--GSPSSPPPASPPSSSLPA---------EDTLELTPENVDRVLEEVRPYLIADGGNIEVVRIDLADRDIFLRLQGACGSCPSSTTTMKMGVERVLREKF-TQLGSVEAVSDAPLSVDETGTPLTERAALERKLEEKLSEILPAIRGLGASASIGGVSEEGVVKLVYQGPEKVKMGVVYALK 507
            D  VPEGHK LH  LYG+  A    +  AG              P  ++L    D  L  VY +YDAS TL+YVG +RN+ +A++GH    G  + A V  +  +    +  AA+ A    W+EE          NR+  EG     +    E  E       AH + K K R AM         E +DEE    ++A      RR +L  AVE  DWS +I+ QT       + D A         S   EGG+  G+   PPP + P +             +  + L  E VD  L EVRP+LIADGGN+EVV +  +   + L  QGACG+CPSS+ TM MG+ER LR  F TQ+  +  V     +  +TG       A E ++++ L+ +  AI+  G S  +  VS EGV KL+Y GP  + +GV  A++
Sbjct:    3 DATVPEGHKSLHGALYGEGGAEVHSSRKAGYQLIPGEDDGDVLIPVDAYLGHRNDASLLGVYALYDASETLQYVGFSRNMCLAIKGHRSRVGKRLAAHVRAKVVQRTSLQSKAALSAEAQRWIEEADVLPPGNGENRNEWEGTGLDVSLMSEEARE-------AHLEHKLKFRLAMG--------ESIDEEPATDDDA-----VRRLKLLKAVEGDDWSAVIDRQTEEVAASHSADLA---DAATPQSQSSEGGSAHGAAQPPPPIASPFTQAAVHRQVGNQEPQPQIPLNAETVDHALNEVRPFLIADGGNVEVVSV--SGGVVSLEFQGACGTCPSSSATMSMGIERCLRATFGTQILQIVQV-----NAQDTG-------ATEVRVDDHLNMLRGAIQSYGGSVVVKSVS-EGVCKLLYNGPPAIAVGVRAAVR 401          
The following BLAST results are available for this feature:
BLAST of EWM23395.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104407|gb|EWM23395.1|0.000e+0100.00iron-sulfur cluster assembly protein [Nannochlorop... [more]
gi|545710673|ref|XP_005707644.1|1.134e-7538.13iron-sulfur cluster scaffold protein [Galdieria su... [more]
gi|873235075|emb|CEM00986.1|6.559e-7437.18unnamed protein product [Vitrella brassicaformis C... [more]
gi|298706477|emb|CBJ29464.1|2.007e-6837.76iron-sulfur cluster assembly protein, similar to n... [more]
gi|148907013|gb|ABR16650.1|1.222e-6334.55unknown [Picea sitchensis][more]
gi|1026761407|gb|OAE22888.1|1.080e-5136.38hypothetical protein AXG93_3544s1000 [Marchantia p... [more]
gi|1189392064|gb|OSX78983.1|7.354e-5038.46hypothetical protein BU14_0093s0026 [Porphyra umbi... [more]
gi|545366069|ref|XP_005647957.1|2.794e-4935.68NifU-domain-containing protein [Coccomyxa subellip... [more]
gi|971511916|dbj|GAQ86272.1|3.597e-4634.00NFU2/3, Fe-S cluster assembly protein [Klebsormidi... [more]
gi|760445509|ref|XP_011399823.1|6.223e-4533.87NifU-like protein 1, chloroplastic [Auxenochlorell... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7297rna7297Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications