rna7291, rna7291 (mRNA) Nannochloropsis gaditana

Overview
Namerna7291
Unique Namerna7291
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1616
Alignment locationCM002471.1:254563..255946 -

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Properties
Property NameValue
ProductTranslationally controlled tumor protein
Orig transcript idgnl|cribi|Naga_100430g3.1390.mrna
Orig protein idgnl|cribi|Naga_100430g3.1390
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:254563..255946 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100430g3gene7056Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7291rna7291-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23400.1cds7274Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7291 ID=rna7291|Name=rna7291|organism=Nannochloropsis gaditana|type=mRNA|length=1616bp
ATGCGGGAGGAAGAGGTGTTGAGCAAGTACCAGAGGTATTTGAGGAAGAA
GGAGAGGGCTTTGGCCGCGGTGGCTGCGACGGGATCGAAGTCGCGGGGGG
AGGGAGGGAGGGGGAAGGAGGCAGGGAGGGAAGGCGGATTGGAGGTGGAG
GAGGATGGACACGGGCTCGCCAAGGGGGAAAGGACAGAGGCAGGAGGCGC
AGGGGGGACAAGTGCGACCTCGTTGTCAAAGGCGTCCGGCCCGTCCTCCT
TCCCGCCCTCGTCCTCCCTCTTCACTTTTCCCCCTCCGGTCCCTGGGCGC
GGGGCGGGATCGCAGGGGGAGGAGGGCCCCCCTGGGGAGGGAGGCGGGAA
CGGGATAGGGGCAGGACAGACCCGGCAGCCGAACCGAAGGGCGGAGAAAA
CGGGCGGGACGGCTGCGGGTACCGGTGGTGGCCAGGAGGGGAGCACGGCG
CGCCATGCGGGCCTAAGCAGAGAGAGGGAGGACGTGGGGACGAAGCCGGG
GAGGGAGGGAGGCCTGGGGGAGCCACGCGACCCTCCCATGGATCTTGACA
AGGAAAAACGTGCCCTGGATACGAGGGGCGCGGAGATGGAGGGGGCCACG
GGTCAAGACCTGCGCAGGAGCAGCATGGCCCTGCCGATGGGCCATCGGGG
CCCGCGGGACGGACGCCACTCGCTCTCGGAGCCTCCGGGTATCTTGAAAG
TGCCCCCCCCCATGCTCATGCCTCTCTCCCCCATGGACCGGGGTAAGGAG
GGAGGGGACGCGGGCCTAGCTCCAGAGGAAGCGTTCGCCCGATTCGGGGA
CCTGGACTCGGTCTTGTCCCCGACGGCGCAGGGAGAGTTGATTTCCGCCC
TAGGCATGGACTCTTCCTCGTGGTGATAAAACGAGGGAAAGGGGGGGAAG
CGCGGGGTGATGGAGGAAAGGAGGGCGGGAAGGAGGGTTTGAGGGAGGTA
AGATGACTGGTGGGGAGGGGGGTTGGATCGGATCAGAGACTTGGGAGTGT
TCTCGTGGTGAAAAGATTGAGAGACCGTGCTGTGTAGAGGACGCATGCCT
TGCGCGGTCCGGATTCGGGGGAATAGTCCGGAGGCGACGGCCCACGCCTG
TCAACCGATGGTCTGATGGATCTTGGGTGTATCATACAGGGGATGGGAAT
GGGAGGGAGGATGCAAGTAGGAAAGACGTGGGCGAGAGGGTCAGGGTTGT
GTGTAGGGGGTGCTTGGTGGCGTGTCCTGCCAGACAGGGGCGGCTAGGGC
GGTTCGTAGAGCCTTGTTCGTGGGGGAGAGAGGGGAGGTAGGGGCTGGGA
GGCTTCCTCGTGTCACAACGGTGGAGAGGGAGGGTGGCGCGTGTCGGGAG
TCGTCCTCCGAGAGCACAGAGGCCCGCACCGCCGACAAAGGAAGCTGCCG
CTGGGAGTTGAATTCCCGCAAGAGAGGGAGGGGTTGCTGCCGCGTGACAG
CCGGATGATGGGCCGGTGCTTGTGCCCTCAAGGGGAAGTTACGTGGTCGG
GCCCAGGAGAGGGTTTGCGATACGTTTCGCCGCCTCCCTTACCCCACGCC
CGTGAAAGCAGGGGCCGAAGGAGGAAACAGTTTTAAAAAAATCGAAATCA
ACAAATCATGCCACGA
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protein sequence of rna7291

>rna7291-protein ID=rna7291-protein|Name=rna7291|organism=Nannochloropsis gaditana|type=polypeptide|length=180bp
MIVYKDVISGDEVVSDALKIEPVKENGEDVPGLFEVDSAMVAVGGGDIDI
GCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKD
YVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNP
DAGLIFSYYKDGAHCPTFVYIKSGYKVVKF
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mRNA from alignment at CM002471.1:254563..255946-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7291 ID=rna7291|Name=rna7291|organism=Nannochloropsis gaditana|type=mRNA|length=1384bp|location=Sequence derived from alignment at CM002471.1:254563..255946- (Nannochloropsis gaditana)
TGACACGTGAACAAGTGGCTTGAAAAGAGGAAGGAAATGCCTGGGTTTCC
CTTCGAGAGCGGGAACTCGCTTGTGCGTCATCCTAGCTACCCATGGTCCC
TTTGTGGGGGAGGCTGTTTCGTCCTACCGAATGTGTGGCGCTCCATGCAT
CTTCTGCCTCCCAAACCACCAACATGAGCACGCGAAGGAAGGAGAAAAAA
GTGGCCGCAACGTTCTCTTCTCATATTTATTGTCTCATCACAAACATAGG
TACATAATACAACAATCATGATCGTCTACAAGGATGTCATTAGCGGTGAC
GAAGTGGTGAGTTATCTCTCGGACCCGTGTGACATTCCTTGGTCACCTTC
ACGAAATGCATCCTTGTGTATCGCGCCGGCACGAAAGATGGACATTGCTT
GACAGGAACGTGTGTGCCGCGGATTCCAGGAAGCAAGGACCGCCACCTCC
CGTTTCTCGCACCGTTGAGCTTGCTTCCTGCATGATCCTTGACCTCAATA
CCCCCCCACGCAGTCTTTTTCTATTCAAAACGCACTTTCTGATGGTTGTC
CTTTTTTCCCACGGTTCAGGTCTCGGACGCGCTAAAAATTGAGCCCGTGA
AGGAGAACGGGGAGGACGTCCCGGGTCTATTTGAAGTGGATTCGGCCATG
GTTGCCGTTGGCGGTGGAGACATCGACATCGGGTGTGGTAATGCTTTTGG
GGGGGCAGGGGAAGACGAGGGAGCAGACGACAATGTCCAAAAAGAGAACA
ACGTGTCGGGTTCCAGCGGCTTCAATTACACGGCGATGCCCTTCTCGAGT
AAGGGTGAATTCAAAAGCTGGGTCAAAGACTACGTCCGCAACGTCCGTCA
GGCTCTGAAAGCGAACGGCGTAGCCGTGGAAGAGATCAAAAAATTCATGG
AAGAAGCCCCGGGGTTCGTCAAGTGGCTGGTGGACAAGTACGACGACCTC
GAGTTCTTTATGTCCAAGAGCATGAACCCGGATGCGGGCTTGATCTTCTC
TTACTACAAGGACGGGGCGCACTGCCCCACTTTTGTGTACATCAAGAGTG
GCTACAAGGTTGTCAAGTTCTAAAGATCAGCAGGGAGGGGATTTGGCGGC
AGGGATAGTGGTGGGTGCGGTTGGGACGGGTGCAGCGAGAAGAGAGGAGG
GGGTCGTGGGGCAGGCTGGAAGCGATGAGAGACGGAAGAGTGAAAACTGA
GGGACGGAGGCAAAAGCACCGCACGGAAAGACTAGAGGGCGAGAACCTTA
TAGACGTTCAATCGTGGCATGATTTGTTGATTTCGATTTTTTTAAAACTG
TTTCCTCCTTCGGCCCCTGCTTTCACGGGCGTGGGGTAAGGGAGGCGGCG
AAACGTATCGCAAACCCTCTCCTGGGCCCGACCA
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Coding sequence (CDS) from alignment at CM002471.1:254563..255946-

>rna7291 ID=rna7291|Name=rna7291|organism=Nannochloropsis gaditana|type=CDS|length=1086bp|location=Sequence derived from alignment at CM002471.1:254563..255946- (Nannochloropsis gaditana)
GTCTCGGACGCGCTAAAAATTGAGCCCGTGAAGGAGAACGGGGAGGACGT
CCCGGGTCTATTTGAAGTGGATTCGGCCATGGTTGCCGTTGGCGGTGGAG
ACATCGACATCGGGTGTGGTAATGCTTTTGGGGGGGCAGGGGAAGACGAG
GGAGCAGACGACAATGTCCAAAAAGAGAACAACGTGTCGGGTTCCAGCGG
CTTCAATTACACGGCGATGCCCTTCTCGAGTAAGGGTGAATTCAAAAGCT
GGGTCAAAGACTACGTCCGCAACGTCCGTCAGGCTCTGAAAGCGAACGGC
GTAGCCGTGGAAGAGATCAAAAAATTCATGGAAGAAGCCCCGGGGTTCGT
CAAGTGGCTGGTGGACAAGTACGACGACCTCGAGTTCTTTATGTCCAAGA
GCATGAACCCGGATGCGGGCTTGATCTTCTCTTACTACAAGGACGGGGCG
CACTGCCCCACTTTTGTGTACATCAAGAGTGGCTACAAGGTTGTCAAGTT
CTAAATGATCGTCTACAAGGATGTCATTAGCGGTGACGAAGTGGTCTCGG
ACGCGCTAAAAATTGAGCCCGTGAAGGAGAACGGGGAGGACGTCCCGGGT
CTATTTGAAGTGGATTCGGCCATGGTTGCCGTTGGCGGTGGAGACATCGA
CATCGGGTGTGGTAATGCTTTTGGGGGGGCAGGGGAAGACGAGGGAGCAG
ACGACAATGTCCAAAAAGAGAACAACGTGTCGGGTTCCAGCGGCTTCAAT
TACACGGCGATGCCCTTCTCGAGTAAGGGTGAATTCAAAAGCTGGGTCAA
AGACTACGTCCGCAACGTCCGTCAGGCTCTGAAAGCGAACGGCGTAGCCG
TGGAAGAGATCAAAAAATTCATGGAAGAAGCCCCGGGGTTCGTCAAGTGG
CTGGTGGACAAGTACGACGACCTCGAGTTCTTTATGTCCAAGAGCATGAA
CCCGGATGCGGGCTTGATCTTCTCTTACTACAAGGACGGGGCGCACTGCC
CCACTTTTGTGTACATCAAGAGTGGCTACAAGGTTGTCAAGTTCTAAATG
ATCGTCTACAAGGATGTCATTAGCGGTGACGAAGTG
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Synonyms
Publications