EWM23400.1, cds7274 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|553180370|ref|XP_005853391.1| (translationally controlled tumor protein [Nannochloropsis gaditana CCMP526] >gi|422295669|gb|EKU22968.1| translationally controlled tumor protein [Nannochloropsis gaditana CCMP526] >gi|585104413|gb|EWM23400.1| Translationally controlled tumor protein [Nannochloropsis gaditana]) HSP 1 Score: 361.688 bits (927), Expect = 2.458e-126 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKENGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
MIVYKDVISGDEVVSDALKIEPVKENGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF
Sbjct: 1 MIVYKDVISGDEVVSDALKIEPVKENGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|298705970|emb|CBJ29091.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 179.104 bits (453), Expect = 2.910e-54 Identity = 94/181 (51.93%), Postives = 122/181 (67.40%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKEN-GEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
MIVYKD+ISGDE+++DA PV N GE V G+FEV+S+ G ++DIGCGNAFGG E+E DD+V+K NNV F YT +PF SK E K ++K+YVR+VR LK G EIK+FM +APG VK+L+ K+ D++ F +SM + G+ F YYKDGAH PTF YI + KF
Sbjct: 1 MIVYKDLISGDEMMTDAFPQNPVVGNDGETVEGMFEVESSTAVKGSDNVDIGCGNAFGG--EEEVVDDSVEKVNNVIDP--FKYTEVPFGSKTELKDYLKEYVRSVRAKLKEKGTPQPEIKEFMAQAPGMVKFLLSKFADMQTFAGESMTAEGGMAFGYYKDGAHNPTFAYISKAMEAEKF 177
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|325194359|emb|CCA28263.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 165.622 bits (418), Expect = 5.678e-49 Identity = 88/182 (48.35%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKE-NGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++D+ + DEVVSDA +I+ VK+ NG+++PG+ V S VA G +DIGCG+AFG D+ DD+V+ NN+S S GF YT + F+SK E K+++K Y R + + LK + V E++ F +EA VK+LV KYDDL+++M +S + +AGL FSYY DGA P F+YIK G K VKF
Sbjct: 1 MLVWQDIFTDDEVVSDANQIQLVKDVNGDEIPGMIMVQSRNVAKGSDSVDIGCGDAFGSG--DQEVDDSVETVNNISDDSIGFGYTEISFASKTELKNYLKSYFRKIMKHLKTSEVTDEKLDSFKKEAQEIVKFLVAKYDDLQYYMFRSCDTEAGLSFSYYPDGATTPVFMYIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|675204571|ref|XP_008911170.1| (hypothetical protein PPTG_15650 [Phytophthora parasitica INRA-310] >gi|566015171|gb|ETI38082.1| hypothetical protein F443_16095 [Phytophthora parasitica P1569] >gi|567952630|gb|ETK78302.1| hypothetical protein L915_15640 [Phytophthora parasitica] >gi|567981289|gb|ETL31732.1| hypothetical protein L916_15536 [Phytophthora parasitica] >gi|568010777|gb|ETL84960.1| hypothetical protein L917_15358 [Phytophthora parasitica] >gi|568040681|gb|ETM38129.1| hypothetical protein L914_15491 [Phytophthora parasitica] >gi|568088540|gb|ETN03397.1| hypothetical protein PPTG_15650 [Phytophthora parasitica INRA-310] >gi|570318905|gb|ETO66853.1| hypothetical protein F444_16080 [Phytophthora parasitica P1976] >gi|570942710|gb|ETP07967.1| hypothetical protein F441_15924 [Phytophthora parasitica CJ01A1] >gi|570973351|gb|ETP36012.1| hypothetical protein F442_15946 [Phytophthora parasitica P10297] >gi|970658159|gb|KUF95960.1| uncharacterized protein AM587_10010820 [Phytophthora nicotianae] >gi|970658763|gb|KUF96487.1| D-threonine aldolase [Phytophthora nicotianae]) HSP 1 Score: 158.303 bits (399), Expect = 4.100e-46 Identity = 84/182 (46.15%), Postives = 122/182 (67.03%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKE-NGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++DV + DEV+SD+ K+ P K+ G +VPG+F+V+S VA G ++DIGCG+AFGG E+E DD+V+ NNV S GF Y F +KGE K+++K Y R + LK+ G + E + +F +A VK+LV + +L+F+M KS + +AGL ++YY +GA PTF YIK G K VKF
Sbjct: 1 MLVWQDVFTEDEVMSDSNKVLPCKDMEGNEVPGMFQVESKTVAKGSDNVDIGCGDAFGG--EEEQIDDSVETVNNVIDDSIGFGYIETGFDTKGELKTYLKSYFRKTMKHLKSTGASDETLTQFKSDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPEGALAPTFCYIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|635364998|emb|CCI46588.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 158.303 bits (399), Expect = 4.673e-46 Identity = 87/182 (47.80%), Postives = 121/182 (66.48%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKEN-GEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++D+ + DEVVSDA K EPVK++ GE++PGLF V S VAVG +DIGCG+AFG D+ DD+V+ NN+S +S GF YT + F+SK E KS++K Y R + + + F +A VK+L+ KY+DL+++M +S + +AGL FSYY DGA P F+YIK G K VKF
Sbjct: 1 MLVWQDIFTNDEVVSDANKPEPVKDSEGEEIPGLFMVQSRNVAVGSDAVDIGCGDAFGSG--DQEVDDSVETVNNISDASIGFAYTEITFASKTELKSYLKSYFRKLLNHPTLKEGDEDTVTVFKSDAQKIVKFLLAKYNDLQYYMFRSCDTEAGLSFSYYPDGATTPVFMYIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|375332097|gb|AFA52588.1| (hypothetical protein [Vaucheria litorea]) HSP 1 Score: 159.073 bits (401), Expect = 6.918e-46 Identity = 90/180 (50.00%), Postives = 127/180 (70.56%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKEN-GEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSSGFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVK 179
MIVY D+ISGDE+++DA KI+PV + GE V GLFEV+S ++ GG ++DIGCGN+FGG G DE DD+V+K NN+ S FN + PF S+ EFK ++K+YV+ VR ALK +G +IK FM AP VK+L++ Y + +F+ S +P + F+YYK+GA P+FV+I++G KV K
Sbjct: 1 MIVYADLISGDEMMTDAFKIKPVMNSKGEKVEGLFEVESEIIVKGGDNVDIGCGNSFGGGGADEIVDDSVEKVNNIISS--FNLSECPFGSRNEFKEYLKEYVKKVRTALKDSGTPQPQIKAFMAIAPDMVKFLLENYKEYQFYTGSSYDPSGAMAFAYYKEGALTPSFVFIEAGLKVTK 178
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|673044979|ref|XP_008876450.1| (hypothetical protein H310_11522 [Aphanomyces invadans] >gi|574467838|gb|ETV94859.1| hypothetical protein H310_11522 [Aphanomyces invadans]) HSP 1 Score: 152.525 bits (384), Expect = 8.061e-44 Identity = 80/182 (43.96%), Postives = 119/182 (65.38%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKEN-GEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++D+ + DEVVSD+ + K+ G +PG+ EV S V GG ++D+GCG+AFGG +D DD+V+ NN+ S GF YT F+SK + K+++K Y R + + LKA + E + +F +A VK LV YDDL+++M +SM+ +AG+ +SYYKDGA P F++IK G K VKF
Sbjct: 1 MLVWQDIFTEDEVVSDSHNVYEAKDKEGNLIPGMIEVASKTVTKGGLNVDVGCGDAFGGGDQD--VDDSVETVNNIIDESVGFGYTETGFNSKADLKTYLKSYFRKIIKHLKATNASDETLDQFKSDAQEIVKALVGMYDDLQYYMFRSMDSEAGMAYSYYKDGATTPVFMFIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|301093462|ref|XP_002997577.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110540|gb|EEY68592.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 151.754 bits (382), Expect = 1.708e-43 Identity = 81/182 (44.51%), Postives = 121/182 (66.48%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKE-NGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++DV + DEV+SD+ K+ P K+ G +V G+F+V+S VA G ++DIGCG+AFGG E+E DD+V+ NNV S GF Y F +K E K+++K + R + + LK+ G + E + +F +A VK+LV + +L+F+M KS + +AGL ++YY +GA PTF YIK G K VKF
Sbjct: 1 MLVWQDVFTEDEVMSDSNKVVPCKDMEGNEVSGMFQVESKTVAKGSDNVDIGCGDAFGG--EEEQIDDSVETVNNVIDDSIGFGYIETGFDTKAELKTYLKSHFRKIMKHLKSTGASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSCDSEAGLAYAYYPEGAVAPTFCYIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|1214690476|gb|OWZ05692.1| (hypothetical protein PHMEG_00022172 [Phytophthora megakarya]) HSP 1 Score: 151.369 bits (381), Expect = 2.880e-43 Identity = 79/182 (43.41%), Postives = 121/182 (66.48%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKE-NGEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V++D+ + DEV+SD+ K+ P K+ G +V G+F+V+S VA G ++DIGCG+AFGG E+E DD+V+ NNV S GF Y F +K E K+++K + R V + LK++ + E + +F +A VK+LV + +L+F+M KS + +AG+ ++YY +GA PTF YIK G K VKF
Sbjct: 1 MLVWQDIFTEDEVMSDSFKVVPCKDLEGNEVSGMFQVESKTVAKGADNVDIGCGDAFGG--EEEAVDDSVETVNNVIDESVGFGYNETGFDTKAELKTYLKSFFRKVMKNLKSSDASDETLAQFKSDAQEIVKFLVSMFKELQFYMFKSFDSEAGMAYAYYPEGAIAPTFCYIKWGLKEVKF 180
BLAST of EWM23400.1 vs. NCBI_GenBank
Match: gi|698808112|ref|XP_009837085.1| (hypothetical protein H257_11761 [Aphanomyces astaci] >gi|574108150|gb|ETV73659.1| hypothetical protein H257_11761 [Aphanomyces astaci]) HSP 1 Score: 150.984 bits (380), Expect = 3.864e-43 Identity = 81/182 (44.51%), Postives = 117/182 (64.29%), Query Frame = 0
Query: 1 MIVYKDVISGDEVVSDALKIEPVKEN-GEDVPGLFEVDSAMVAVGGGDIDIGCGNAFGGAGEDEGADDNVQKENNVSGSS-GFNYTAMPFSSKGEFKSWVKDYVRNVRQALKANGVAVEEIKKFMEEAPGFVKWLVDKYDDLEFFMSKSMNPDAGLIFSYYKDGAHCPTFVYIKSGYKVVKF 180
M+V+ D+ + DEVVSD+ K+ K+ G +PG+ EV S V+ GG ++D+GCG+AFGG D DD+V+ NN+ S GF YT F+SK + K+++K Y R + + LKA + E + F +A VK LV YDDL+++M +SM+ +AG+ FSYYK+G P F+YIK G K VKF
Sbjct: 1 MLVWMDIFTDDEVVSDSHKVYEAKDKEGNLIPGMLEVASKTVSKGGVNVDVGCGDAFGGG--DNEVDDSVETVNNIIDESVGFGYTETGFNSKADLKTYLKSYFRKIIKHLKATNASDETLDSFKSDAQEIVKALVGLYDDLQYYMFRSMDSEAGMAFSYYKEGEATPVFLYIKWGLKEVKF 180 The following BLAST results are available for this feature:
BLAST of EWM23400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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