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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100077g12.5201.mrna |
| Orig protein id | gnl|cribi|Naga_100077g12.5201 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:230556..233476 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7283 ID=rna7283|Name=rna7283|organism=Nannochloropsis gaditana|type=mRNA|length=2967bp
ATGCGGGTTTGGTTGCGAGAGGAGCGATTCGAGGCTGCTCTACCCCTAAA
TCAGCGTGCAATACGGCCCTTGACCCCTCCTATCATCCATGAGCTCATAC
GAATCCTCCGTCGTAGCGCGACCTTGGAGCCCGCCAATGATCCGAGCCAG
CTGGACGAGGCGAATGACGAAAAGGGAGAAGAGGGACGACCCTGTGCCCA
AAAGGTCGTCTGGGCCTGGGTCTCGCGCGGGACGTGGATATCTGAAAGTC
AAAGGGTGCTGCAGTGGGGCGAGCCCACGGCCTGTCTGTTTTGGGAGATG
CTGACTCTTTTCCTCCCTTCAACCCACCGACGCCCCGCCCCCCGCAAGGG
CGGGGGGGAGGACGGGACGGAAGGCGGGAGCGAGGCAGGGGTCCCACCGA
GCGACCGTGTTACTTTGGTGGAGCTGTCTTTGTTTCTGTGGCTTCATCTC
CCCGATGCGTCCACCAAGGTCTCTACTCACCCCGCGACGTACAACGTGGT
CTGGCCGCTGGACTCCGGGGGGGGGGAGCAGCCGTCCCTCGCACAGCCCC
CGCCCTCGCCTCACCTGCCTTCGCCGGCGACGCTGAGAGCGATGCTTGCT
GCCCGCAGTAATGTGGGTGGTGGAGGGGGAGGGCGGGAGGGAGGGCGGGA
GGGAGGGCAAGGAGGGGCCAGCAGTCCCGCCGGTTCCCCCGGCCACCCGT
CCTCCTCTGGAGCCCAGTCCCCTCCCCCGTCCACCAGCCTGGCCGCCCGC
CTGGCACAGTCCCCCCAGGGCGACGAGGGCAGAGCTTCCGTCACCATCCC
GCTGCCGATCCCTATCTACCAAGCAGGGCGGGAGGTGGGGAGGGAAGGCG
GGAGGGAGGGCGGGAGGGAGGGCGGGAGAGAGGGCGGGATGATGGCCATG
GCCATGTCGACCCCGACCCCGGTCCACACCCCGATCGGAGGAAACAGCCC
CATGTCCCCTCGGTCTTATTTTCAAATTCAAAACGAGATCAAATCGGAGA
CCTACCATGTGACTTTCCTCAAGAAATATCTTCGAGACATGCTAATAGAT
ATGAAGGTGGTGCTGGTCAGGCCGGGCAAGGCCCAGGAGGCGATGGAGGA
GGGCAGGGGGGAGGATGGGAGGGAAGAAGGGGTGGATCGTGGACAAGAAG
GAGGGCGGCAAGGAGGAATGGTGTGGCCGGTCTCACGTGAGAGCACAGAG
AGCTCTTGCGGCATTGGGGGTGCCTGGCCACCGTCACGGGAGAGCAGCGG
GAGCATGGACGGGGCAGGGCTGGACATGCGGGTAAGCGCTGGTGAATTTG
ATGCCCTAGGCTTCTTGCTGAGCGGGGGGGAGGAACTGCTGGGGAGGCAG
GTGCGGAAACTGTCCTCTTTGGCGCCCTTGTGGACGTGGGGGGCGGGGTC
TCGGGGGGTGGACCCTGGGGAAGAAGGGGAGGAGGAGGAGGAGGGCTGTC
CTTTCTTGGTGCTCCAAACGTGGCTGGATGAGGCCCTCTGTGTGAACGAG
GCCCTGTACCCCAGCCCCCCATCCCTTCTCTTTCCTGCCCAGAAAGACGA
GCAGTTCCATCCGCACAGTCCCCTTCCCCCGCTTCTGGTCACTTCCCTCA
ACCACGGCACCGTCCTGCACGACGCCTCCACCCCTCCCTCGCCCTCCCCC
CCTGCCTCCCCCCCGTCCGACCCGCCGCATCCTCCCACCCTATCCCCTGC
CCTCCCTCGGACCCTTCCACTCCGGCGCGTCCACGTCCAAGCCTGCCACG
ACGCCAACGTGTACCTGCTGGGACCGATCGAGAGCGCGCATATCGCCGCG
TGCACGGATAGCACCATCGTCCTTGGGGCGGTGGCGGGCCTGGTCCGGGT
GAGCAACTGCGAACGCCTGACCTTGGTGTGCGCTGCGCGTCGATTGGTGG
TCTGCAACTGTTTGGACTCCACCTTCCCCGTCTACCTCCTCCGTCCCGCC
GTCCTGGTTGGGGATAACCGCGGCTGCCGCCTTGCCCCCTACAATACTTG
CTACCCGTCCCTCCCCCTCGACTTGCGGACGGCGGGCTTCGGGGAGCTGG
GCTCGACACAGCCCCGGAACCAGTGGGATTCACCCATCGATTTGACGGCG
GAGGGCCACAATGGGGCGGGGGGCGGCGAAGGTGGGCTGGGGCTGACCCG
GGAAGGGAGTCATGGGGGCAAAGGGGACAGAGACAACGGCCGAAACGCCG
GCCTTGCCGGACAGGAAGGGTCCCGGGCGGGGGGGGAGACACGGATCCTC
CCACCCGAGCATTTCTACACCCTCTCCATCCCAGTCCCTCCCGCCTCCTC
GCCCGGGCTCCCTGGGCAGGGGCCCATGCCACCAGAAGGGAGTCCACCCA
CGCTCCTGTACAACCCTTTTCCCCTTCCGCCTGAGTACGCCTCTGTCCTT
CGAGAACGTTCGGTAGGCCTGGATCGTCTGCAGCAGACCGTGATCGGCTC
TTTAAGCGACGAGCAACGGCCCGGCGTGGAAGCTGCGCTTGTCAGTAAAT
TCTACGAGTGGCTGGCGGCTTCTGGGAATTTGAGGCAGGTCTTGGACCTT
ATCCAGTTAGAGAGGGAGAAGGGCTTGTCGGCCAGGGACGAAAAAGAGGG
CGAGGGAGGAGTGGAGGACGAGGAGGAGGACATGATGGTGGCGGGGCAGA
TGGAAGGGGTCGAAGAAGCGAGGGAAGGAGGAAGGGCCTCGCCAGTGCCT
CTGTCCCACGGACTGATAGGTCGCTTTGTCGCCGCCCACGAACAGCACGT
GCCCGCCCACCCACACACACACTTTGAGCATCCTCGTCCGGGAAGAAAGG
GATTGAGAGGGGTAATCCTCACTGAAGGGGTTGTGAAAGGGACTTCATCG
CCGGATAAAGAGACCGCCCGGGGGAAATGCGATGAAAGACAAGGGAGAGA
TCCCACGCAGGTCTTGACAGATTATCGCCAGAGTGGAGGACGTCCCAATG
ATAGACTGCATCGGTAA back to topprotein sequence of rna7283 >rna7283-protein ID=rna7283-protein|Name=rna7283|organism=Nannochloropsis gaditana|type=polypeptide|length=750bp
MLERPRHGEMEEMDHSSTNPPTRAGDEEEEDKMGKAGEQGAWERMNNAKV
TATLAAAAAGVIQEAAMAIAEAGVYENEKEKKHVLSPRHAQDSLKASTPP
PGDGESPEGSVSSPCPSRSPRHPGNRSHATGTGKGDPRGSGEGKMKTPRA
QKSVAQTMEEDVDSSFFLQDATDRQLMTLVMLVPDTPPVLADLIGKGGST
VGEIQRLTGTQVSIERLVHRGRERKVALMGSILAVATAQQIITARIRHLE
EHCGVGREYVPPPSTPKGYGEGAGTLSSSPSSSTSSSASSSASSSSSSSP
SFESLGMPASQSLPPFPPGHHHHHPVWKDAQGCLKLKLCVPNCTVRHLIG
RAGTVVSAIERDSGCILKFQSEGEMENGALGRILEMLGGGCYAHARACYH
VCRKLADDRTLPTIWKGGDVFSARQKLVKVGEHGGMGGRERVMGGDGTRL
GLAALSPSRSPAPFFVPPRSHLSGQAPVFVAKASLGEKGGEERSSLKPVP
GDRERAFPSGKHLGSMVTRNSSHSVSVPSFPPVTAAGGDMGEGQTPLSFD
SFSDQPFGTRQYRQFNSPDDLLSASSLLLPSQADPGGWFTGRSTFFWGGG
DTRVEKGGNGGEEEKGDGWGAGDVMMMMARVKEQEREMRENSFAWDAKGS
ESVEEEWSGSEVTENGRGAYQVVHVLVPNKAVSFLIGKAGINVIAIEKKS
GAKVEFTREASPPAAERLVNIKGNAKAVKIAEALLEAKTLEWQTSPTLIR back to topmRNA from alignment at CM002471.1:230556..233476+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7283 ID=rna7283|Name=rna7283|organism=Nannochloropsis gaditana|type=mRNA|length=2921bp|location=Sequence derived from alignment at CM002471.1:230556..233476+ (Nannochloropsis gaditana)
agggagatcGAGCTCACTTCCGGGAAATCACCTGTAGGATCAAATACAAT
GCTCGAGAGGCCTAGGCATggggagatggaagaaaTGGACCACAGCAGCA
CCAACCCTCCGACGCGCgccggggacgaggaagaggaagataagATGGGC
AAGGCAGGCGAACaaggggcgtgggagcgcATGAACAACGCGAAGGTGAC
CGCCACgttggcagcagcagcggctggcGTTATCCAGGAGGCAGCAATGG
CCATCGCAGAGGCAGGCGTGTATGAgaatgagaaggaaaaaaaacatgtC
CTGTCACCGCGCCACGCACAAGACTCTTTGAAGGCAagcacgcccccccc
cggggacgGCGAGAGTCCAGAAGGCTCTGTGAGCTCACCCTGTCCCAGCC
GAAGCCCCAGGCATCCTGGAAACAGGAGCCACGCCACGGGCACAGGCAAA
GGCGACCCTcgggggagtggggaggggaagatgaagacgCCCCGGGCCCA
GAAATCCGTCGCCcagacgatggaggaggacgtggactcgtccttcttcc
tccaggaCGCCACAGACCGACAGCTCATGACCCTGGTCATGCTGGTCCCG
GATACCCCCCCCGTGCTGGCGGACTTGATCGGCAAGGGGGGCAGCACGGT
GGGGGAGATTCAACGCCTGACAGGGACCCAGGTCTCGATCGAACGGCTCG
TGCACCGAGgccgagagaggaaggtggctCTCATGGGGAGCATTCTGGCG
GTGGCGACGGCCCAGCAGATCATCACCGCCCGCATTCGCCACCTGGAGGA
ACATTGCGGCGTGGGCCGAGAGTACGTGCCCCCCCCGAGCACACCCAAGG
Gctacggggagggcgcggggaccctgtcctcctccccttcctcctccacc
tcctcctctgcgtcctccagcgcctcctcttcctcttcctcctcgccttc
cttcgAGTCCCTGGGGATGCCGGCCTCCcagtcccttccccccttccctc
cgggtcaccaccaccaccaccctgTCTGGAAGGACGCCCAAGGTTGTCTG
AAATTGAAGTTGTGCGTACCGAATTGCACGGTCAGGCACTTGATTGGCAG
GGCAGGCACGGTGGTCTCGGCGATCGAACGCGACAGCGGTTGCATTTTGA
AATTtcaaagcgaaggagagaTGGAAAACGGCGCCTTGGGTCGTATACTG
GAGatgttggggggggggtgtTACGCCCATGCCCGAGCGTGCTACCACGT
GTGCAGGAAGCTTGCAGACGATCGGACCCTGCCCACGatttggaagggag
gggacgttTTCAGCGCCCGACAGAAGTTGGTCAAGGTAGGCGAGCACGGC
ggcatgggggggagagagcgggtcatggggggggacgggacgCGCCTGGG
GCTTGCTGCCCTGTCGCCCTCTCGCTCGCCGGCTCCCTTCTTTGTccccc
ctcgttcccacCTCTCGGGACAAGCACCGGTGTTTGTCGCGAAAGCCTCC
ctgggcgagaagggaggggaggagaggagcagcCTGAAGCCCGTTCCTGG
CGATCGAGAGCGTGCCTTTCCCTCTGGCAAACACCTGGGATCGATGGTTA
CCCGCAACAGCAGCCATAGCGTCTCTGTGCCTTCATTCCCCCCTGTAacg
gcggcgggcggagacATGGGGGAAGGTCAAACCCCCTTGTCGTTTGACTC
GTTTAGCGACCAACCGTTCGGCACGCGGCAGTACCGGCAGTTCAACTCTC
CCGACGATCTTTTGtcggcctcctcgctccttcttccctcccaagcgGAT
CCAGGGGGATGGTTCACGGGGAGAAGCacgtttttttggggggggggcga
cacgagggtggagaaaggagggaacggcggagaggaagagaaaggggacg
gatggggggcgggggacgtgatgatgatgatggctaGGGtaaaggagcag
gagcgggagatGCGAGAGAACAGCTTCGCCTGGGATGCCAAAGGAAgcga
gagcgtggaggaggagtggtCAGGATCCGAGGTGAcggagaatgggaggg
gggcgtaCCAAGTCGTGCACGTGCTCGTCCCCAACAAGGCCGTGAGCTTT
TTGATCGGAAAGGCGGGCATTAATGTCATCGCGATTGAGAAGAAAAGCGG
GGCAAAAGTGGAATTTACTCGGGAGGCAAGCCCCCCGGCGGCAGAGCGAC
TAGTAAACATAAAGGGTAATGCCAAAGCGGTGAAAATTGCGGAGGCTCTT
CTAGAGGCGAAGACTTTGGAATGGCAGACGAGTCCGACTCTGATTCGGTA
GGCCAGAGGAGAGTTTTAGGGGGCCAAGTATGTCGCGCaacgaaggaagg
caggagacaATGCATGGAGTTGACAGATTTGTGGCTACGGGGTTGGAATC
AGCGATGACTTTGGGGACAGGGTTTCAATATGGAAACAGCTACGTACGAG
TGCAATTGAAACACAATGGCACCTTTTTTGAGTCTGAAATGGATGGAAAT
GAAAGCCGAAGTTCTAGAATGACATGGCAGATTCTCATTGTTGACGATTA
GGGATATGAAGGTGGACATGTCTCCAAATGATGACTTTTTAAATAATACA
TTTATGAATAAGTAGACTGCATGATGCACAGGCTAGACAGATGTGCGATC
GGGAAAGGGCATCTAGAAAAAGATAGGAAGCGTTATGACAGGAAAACAGC
CTAATTATGCTCAGGTGTCGAACAGAGAAGGATATGAACACTTGATGTAG
GGGACATTGTTTGTCCCACGCATGACTTGAAAAATTGGTGTGATGTTGCC
GTATAGTGCCTTTTAATGAACCACCGCAGcaatgaaggagaagcaaaTGA
TCGATGATAGCCATGGAGCCTCGCAAACTTTTTCGTCGGTAGTAATAAAG
AAATTGCTTTATGGAACGTCA back to topCoding sequence (CDS) from alignment at CM002471.1:230556..233476+ >rna7283 ID=rna7283|Name=rna7283|organism=Nannochloropsis gaditana|type=CDS|length=2253bp|location=Sequence derived from alignment at CM002471.1:230556..233476+ (Nannochloropsis gaditana)
ATGCTCGAGAGGCCTAGGCATggggagatggaagaaaTGGACCACAGCAG
CACCAACCCTCCGACGCGCgccggggacgaggaagaggaagataagATGG
GCAAGGCAGGCGAACaaggggcgtgggagcgcATGAACAACGCGAAGGTG
ACCGCCACgttggcagcagcagcggctggcGTTATCCAGGAGGCAGCAAT
GGCCATCGCAGAGGCAGGCGTGTATGAgaatgagaaggaaaaaaaacatg
tCCTGTCACCGCGCCACGCACAAGACTCTTTGAAGGCAagcacgcccccc
cccggggacgGCGAGAGTCCAGAAGGCTCTGTGAGCTCACCCTGTCCCAG
CCGAAGCCCCAGGCATCCTGGAAACAGGAGCCACGCCACGGGCACAGGCA
AAGGCGACCCTcgggggagtggggaggggaagatgaagacgCCCCGGGCC
CAGAAATCCGTCGCCcagacgatggaggaggacgtggactcgtccttctt
cctccaggaCGCCACAGACCGACAGCTCATGACCCTGGTCATGCTGGTCC
CGGATACCCCCCCCGTGCTGGCGGACTTGATCGGCAAGGGGGGCAGCACG
GTGGGGGAGATTCAACGCCTGACAGGGACCCAGGTCTCGATCGAACGGCT
CGTGCACCGAGgccgagagaggaaggtggctCTCATGGGGAGCATTCTGG
CGGTGGCGACGGCCCAGCAGATCATCACCGCCCGCATTCGCCACCTGGAG
GAACATTGCGGCGTGGGCCGAGAGTACGTGCCCCCCCCGAGCACACCCAA
GGGctacggggagggcgcggggaccctgtcctcctccccttcctcctcca
cctcctcctctgcgtcctccagcgcctcctcttcctcttcctcctcgcct
tccttcgAGTCCCTGGGGATGCCGGCCTCCcagtcccttccccccttccc
tccgggtcaccaccaccaccaccctgTCTGGAAGGACGCCCAAGGTTGTC
TGAAATTGAAGTTGTGCGTACCGAATTGCACGGTCAGGCACTTGATTGGC
AGGGCAGGCACGGTGGTCTCGGCGATCGAACGCGACAGCGGTTGCATTTT
GAAATTtcaaagcgaaggagagaTGGAAAACGGCGCCTTGGGTCGTATAC
TGGAGatgttggggggggggtgtTACGCCCATGCCCGAGCGTGCTACCAC
GTGTGCAGGAAGCTTGCAGACGATCGGACCCTGCCCACGatttggaaggg
aggggacgttTTCAGCGCCCGACAGAAGTTGGTCAAGGTAGGCGAGCACG
GCggcatgggggggagagagcgggtcatggggggggacgggacgCGCCTG
GGGCTTGCTGCCCTGTCGCCCTCTCGCTCGCCGGCTCCCTTCTTTGTccc
ccctcgttcccacCTCTCGGGACAAGCACCGGTGTTTGTCGCGAAAGCCT
CCctgggcgagaagggaggggaggagaggagcagcCTGAAGCCCGTTCCT
GGCGATCGAGAGCGTGCCTTTCCCTCTGGCAAACACCTGGGATCGATGGT
TACCCGCAACAGCAGCCATAGCGTCTCTGTGCCTTCATTCCCCCCTGTAa
cggcggcgggcggagacATGGGGGAAGGTCAAACCCCCTTGTCGTTTGAC
TCGTTTAGCGACCAACCGTTCGGCACGCGGCAGTACCGGCAGTTCAACTC
TCCCGACGATCTTTTGtcggcctcctcgctccttcttccctcccaagcgG
ATCCAGGGGGATGGTTCACGGGGAGAAGCacgtttttttggggggggggc
gacacgagggtggagaaaggagggaacggcggagaggaagagaaagggga
cggatggggggcgggggacgtgatgatgatgatggctaGGGtaaaggagc
aggagcgggagatGCGAGAGAACAGCTTCGCCTGGGATGCCAAAGGAAgc
gagagcgtggaggaggagtggtCAGGATCCGAGGTGAcggagaatgggag
gggggcgtaCCAAGTCGTGCACGTGCTCGTCCCCAACAAGGCCGTGAGCT
TTTTGATCGGAAAGGCGGGCATTAATGTCATCGCGATTGAGAAGAAAAGC
GGGGCAAAAGTGGAATTTACTCGGGAGGCAAGCCCCCCGGCGGCAGAGCG
ACTAGTAAACATAAAGGGTAATGCCAAAGCGGTGAAAATTGCGGAGGCTC
TTCTAGAGGCGAAGACTTTGGAATGGCAGACGAGTCCGACTCTGATTCGG
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