rna7271, rna7271 (mRNA) Nannochloropsis gaditana

Overview
Namerna7271
Unique Namerna7271
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1714
Alignment locationCM002471.1:187401..188390 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102217g1.7755.mrna
Orig protein idgnl|cribi|Naga_102217g1.7755
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:187401..188390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102217g1gene7036Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7271rna7271-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23419.1cds7254Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7271 ID=rna7271|Name=rna7271|organism=Nannochloropsis gaditana|type=mRNA|length=1714bp
CCTCCCTCTCCTTCTCCTTTCTTGTCGCTTCATTTCCTCTGTCTGGATTC
GGATTCCCCCGTGGGACTGGATTTGGAATGTTCAAGTCCATTTCTTCCCC
CCCACCTCCCGTGACCCGTCGTTCCCCGATGGCGGGGGAGGCCGGGGCTG
CATGCTTTCTTCCCGTATACAACCGCCCTCGGTCGTAGAAATGACTATTA
AATTCGATGACCTGCGGTCCTTTTTCAGCCTCCCCCCACCCTTCCCAGCT
GCTTTCACTCCTCGTTCTCCCTGTTGTGACCCACCTCCCCTCCCGAGCCA
CTAGTTCACCCCGCGCGCCTCCCATCCATGCACCGACAACAGGGAGCTTC
CATGTGGTTTGTCCCAAAAGGCCGCTACTCTTACCCCCACATTCGCTGGA
ATCAAATCAAGCTCTACTTGAAAGAAGACATGCTAGGTCCAGGAGGTTCT
CCCCCTTCCTACGAAGCCGCCACTGCCTTGGTCGATTCCAAAGGAGGGGG
AAGCGGGCCGGGTGGGGGCGGACGGGGCGGAGGAAGCGAGGGAGGGAGGG
CCCGCGGGAGCAAGGTAGTGAAGAAAGAAAAGATCACGCGCTCTCCCTCT
GCTTTTTTGCTCTTCACCAAGGAGAAACGGCCGGAGATGGAGAAAGGATT
GACCTTTGGGGAACAACAGAAGGTGCTCTCTGCAGCTTGGAAGGCCTTGC
CGGAAGATAGCCAAGAGCGGCTGATTTATCTGGAGAAAGCGGAAAAATTA
CGAGAAACAAGCAGTCCGTCTTCCGGGAAAAAACGCGCCACTTCCGCCTC
CTTGGTCCCCCGCAATGCCTACCAACTCTTTTGCCACGAGGCGCGTCCGT
CGCTGTCGAAGGGCATCAGCGTGGTGGAACAAGCCAAAACCCTGTCCGCG
AAATGGAAGGAGGTGGATGAGGAGGCGAGGAGGGAGCTGGGGAGAAGGTT
AGAGGCGATGAGGGAGGAGGAGAGGGAGAGGCAGGCGAAGGAGGCCGTGG
TCTGAGACGGGAGGGGGGAAGCAAAGCAAAAATCACGCTGTCTCACTCTG
TCGACAAGGAAACATCGAATGCCACTGACCGGATCCAAGAGGGAAAAAAC
GATGCCGGCAACGGGTCACGAGTTCATTTTATTCCCTCCCCTCTGTGATG
GGGGCGTGCAAGTCAATAGTCAGCAAGCACCTACTCTATCACCGAGCTAA
CCTCCTTCCCCTGGCCGACGTCCGTGCCTGTAAGCCCTTTGGGCGGAATC
TCGTCCGAAAATTCCCTCTTCCTCCTTCCAACATCCTCTATCCTCCCCCT
CCCTCCCCCTTCTACCACTTCTTTTCCCTCTATTTGTGTTTATTTCGGTA
TGAGAAGAACGCAAAGCCGCCCAAGACCGCCATTCCCAGCGTGATCAACG
TATACATCTCCGTCTTTTCGTTCCACCACCCCTCCTTCCCTCCTTCCTTC
CCTCCTTCCTTCCCTCCCTTCTTCCCTTTCCTTCTTCCACCCTCGACGGC
GCGTGCTTTCCCCCCCCCGGAAGCTCCCGCCCCAGAGGTCGCTCCTGTTA
AGGACGCAGGCAGGGAGGAAAAGAGAGAGGAAGCAGGCAGGCCGGTACCG
CCGGTAGCAGCCGTGGGGGGGGAAGGCTGTGCTTCTCGGTCCTCTTCAGC
CGTCGCCTCTGACGACAACTGGAAGGCCTGAGAGCATGGCGGCAAGGAAC
AAGGAGGGAAGGAA
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protein sequence of rna7271

>rna7271-protein ID=rna7271-protein|Name=rna7271|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MISRQVPMCIPVTLSPFPVPCRRKSAKRVLLPSLGENATCGVFVGPYGPY
VRDLLPGEPSDALLLRDPGAAKAFYQDVWADDDAGFMKSTSEVRRAPVPA
EFTNDPASITAEAVESLLEMSGQGKGITLGRDARTGSEILLRATKYGRSL
EVTVNETLHRVQVPQSINASSCPPGTHLLPP
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mRNA from alignment at CM002471.1:187401..188390-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7271 ID=rna7271|Name=rna7271|organism=Nannochloropsis gaditana|type=mRNA|length=990bp|location=Sequence derived from alignment at CM002471.1:187401..188390- (Nannochloropsis gaditana)
GAGTCGTGGTGGCGGATGATATCTCGCCAAGTCCCCATGTGCATCCCCGT
TACCCTTTCTCCTTTCCCGGTCCCGTGCCGCAGGAAATCAGCCAAGCGCG
TCCTCCTCCCGTCCTTGGGTGAAAATGCCACCTGCGGGGTCTTCGTCGGC
CCATATGGCCCCTACGTCCGGGACCTCCTGCCCGGCGAGCCCTCTGATGC
TCTGCTCCTGCGAGATCCTGGGGCCGCAAAGGCCTTCTATCAGGACGTGT
GGGCGGACGACGATGCCGGGTTTATGAAGAGTACTAGCGAGGTGGGCGGC
AGGGAGGGAGGGAGGGGAAAAAGGGAGGGGCGTGCATGATCACCAGCGAG
GCGGGAGGGCCAGCGAGGCGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGG
AATGAAGGAGGGCAGACGCGCAGGTTTTCCTCTTGAGCATCCGAAGCTAA
CGCCCGGTCCGGTGGGTATTGACAGATATTTCATTCCCCGTCCTCGTTCT
GCCTTCCTTTGTGTCCTGCTCTTCAGGTGCGACGGGCCCCTGTCCCCGCC
GAGTTCACGAACGATCCCGCCTCCATTACCGCAGAGGCAGTAGAGTCGCT
CTTGGAAATGAGCGGTCAGGGAAAAGGGATCACGTTGGGGCGCGATGCCA
GAACCGGCTCGGAAATTTTACTGAGGGCGACCAAGTACGGACGCTCTTTG
GAAGTGACGGTAGGAGGAGGAGAGAGAAGGGAGGAAGGGAAGAAGGGAGA
GGGGAAGAAAAGAGCAAATAGACTTGCCTTTCGAGACGGAAGGGATCTTG
TGCTATGTTTTGCTGCGCAATGATCTGGAGCGGTCCATCGATTTGGGTGC
ACCGTTTATGCCGGTGGTGATCTCACCGCCCCCCACATTCCTTCCCACCT
CTCTAGGTCAACGAGACGCTGCACAGGGTCCAGGTCCCTCAGAGCATAAA
TGCCTCGTCCTGTCCCCCCGGTACCCATTTGCTCCCTCCC
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Coding sequence (CDS) from alignment at CM002471.1:187401..188390-

>rna7271 ID=rna7271|Name=rna7271|organism=Nannochloropsis gaditana|type=CDS|length=1629bp|location=Sequence derived from alignment at CM002471.1:187401..188390- (Nannochloropsis gaditana)
GTCAACGAGACGCTGCACAGGGTCCAGGTCCCTCAGAGCATAAATGCCTC
GTCCTGTCCCCCCGGTACCCATTTGCTCCCTCCCGTGCGACGGGCCCCTG
TCCCCGCCGAGTTCACGAACGATCCCGCCTCCATTACCGCAGAGGCAGTA
GAGTCGCTCTTGGAAATGAGCGGTCAGGGAAAAGGGATCACGTTGGGGCG
CGATGCCAGAACCGGCTCGGAAATTTTACTGAGGGCGACCAAGTACGGAC
GCTCTTTGGAAGTGACGATGATATCTCGCCAAGTCCCCATGTGCATCCCC
GTTACCCTTTCTCCTTTCCCGGTCCCGTGCCGCAGGAAATCAGCCAAGCG
CGTCCTCCTCCCGTCCTTGGGTGAAAATGCCACCTGCGGGGTCTTCGTCG
GCCCATATGGCCCCTACGTCCGGGACCTCCTGCCCGGCGAGCCCTCTGAT
GCTCTGCTCCTGCGAGATCCTGGGGCCGCAAAGGCCTTCTATCAGGACGT
GTGGGCGGACGACGATGCCGGGTTTATGAAGAGTACTAGCGAGGTCAACG
AGACGCTGCACAGGGTCCAGGTCCCTCAGAGCATAAATGCCTCGTCCTGT
CCCCCCGGTACCCATTTGCTCCCTCCCGTGCGACGGGCCCCTGTCCCCGC
CGAGTTCACGAACGATCCCGCCTCCATTACCGCAGAGGCAGTAGAGTCGC
TCTTGGAAATGAGCGGTCAGGGAAAAGGGATCACGTTGGGGCGCGATGCC
AGAACCGGCTCGGAAATTTTACTGAGGGCGACCAAGTACGGACGCTCTTT
GGAAGTGACGATGATATCTCGCCAAGTCCCCATGTGCATCCCCGTTACCC
TTTCTCCTTTCCCGGTCCCGTGCCGCAGGAAATCAGCCAAGCGCGTCCTC
CTCCCGTCCTTGGGTGAAAATGCCACCTGCGGGGTCTTCGTCGGCCCATA
TGGCCCCTACGTCCGGGACCTCCTGCCCGGCGAGCCCTCTGATGCTCTGC
TCCTGCGAGATCCTGGGGCCGCAAAGGCCTTCTATCAGGACGTGTGGGCG
GACGACGATGCCGGGTTTATGAAGAGTACTAGCGAGGTCAACGAGACGCT
GCACAGGGTCCAGGTCCCTCAGAGCATAAATGCCTCGTCCTGTCCCCCCG
GTACCCATTTGCTCCCTCCCGTGCGACGGGCCCCTGTCCCCGCCGAGTTC
ACGAACGATCCCGCCTCCATTACCGCAGAGGCAGTAGAGTCGCTCTTGGA
AATGAGCGGTCAGGGAAAAGGGATCACGTTGGGGCGCGATGCCAGAACCG
GCTCGGAAATTTTACTGAGGGCGACCAAGTACGGACGCTCTTTGGAAGTG
ACGATGATATCTCGCCAAGTCCCCATGTGCATCCCCGTTACCCTTTCTCC
TTTCCCGGTCCCGTGCCGCAGGAAATCAGCCAAGCGCGTCCTCCTCCCGT
CCTTGGGTGAAAATGCCACCTGCGGGGTCTTCGTCGGCCCATATGGCCCC
TACGTCCGGGACCTCCTGCCCGGCGAGCCCTCTGATGCTCTGCTCCTGCG
AGATCCTGGGGCCGCAAAGGCCTTCTATCAGGACGTGTGGGCGGACGACG
ATGCCGGGTTTATGAAGAGTACTAGCGAG
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Synonyms
Publications