EWM23419.1, cds7254 (CDS) Nannochloropsis gaditana

Overview
NameEWM23419.1
Unique Namecds7254
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:188100..188375 -
Alignment locationCM002471.1:187682..187864 -
Alignment locationCM002471.1:187401..187484 -

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Properties
Property NameValue
Start range187401
Start range.
Protein idEWM23419.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102217g1.7755.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:188100..188375 -
CM002471.1supercontigCM002471.1:187682..187864 -
CM002471.1supercontigCM002471.1:187401..187484 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23419.1 vs. NCBI_GenBank
Match: gi|585104436|gb|EWM23419.1| (hypothetical protein Naga_102217g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 369.392 bits (947), Expect = 1.816e-129
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MISRQVPMCIPVTLSPFPVPCRRKSAKRVLLPSLGENATCGVFVGPYGPYVRDLLPGEPSDALLLRDPGAAKAFYQDVWADDDAGFMKSTSEVRRAPVPAEFTNDPASITAEAVESLLEMSGQGKGITLGRDARTGSEILLRATKYGRSLEVTVNETLHRVQVPQSINASSCPPGTHLLPP 181
            MISRQVPMCIPVTLSPFPVPCRRKSAKRVLLPSLGENATCGVFVGPYGPYVRDLLPGEPSDALLLRDPGAAKAFYQDVWADDDAGFMKSTSEVRRAPVPAEFTNDPASITAEAVESLLEMSGQGKGITLGRDARTGSEILLRATKYGRSLEVTVNETLHRVQVPQSINASSCPPGTHLLPP
Sbjct:    1 MISRQVPMCIPVTLSPFPVPCRRKSAKRVLLPSLGENATCGVFVGPYGPYVRDLLPGEPSDALLLRDPGAAKAFYQDVWADDDAGFMKSTSEVRRAPVPAEFTNDPASITAEAVESLLEMSGQGKGITLGRDARTGSEILLRATKYGRSLEVTVNETLHRVQVPQSINASSCPPGTHLLPP 181
The following BLAST results are available for this feature:
BLAST of EWM23419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104436|gb|EWM23419.1|1.816e-129100.00hypothetical protein Naga_102217g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7271rna7271Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications