rna7258, rna7258 (mRNA) Nannochloropsis gaditana

Overview
Namerna7258
Unique Namerna7258
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length4851
Alignment locationCM002471.1:158525..159530 -

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Properties
Property NameValue
Productlactoylglutathione lyase
Orig transcript idgnl|cribi|Naga_100238g5.1208.mrna
Orig protein idgnl|cribi|Naga_100238g5.1208
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:158525..159530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100238g5gene7023Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23432.1cds7241Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7258rna7258-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7258 ID=rna7258|Name=rna7258|organism=Nannochloropsis gaditana|type=mRNA|length=4851bp
ATGTCCGAAGCAGGCCGAAGCAGCAACAGTGGGGAAAAAGGTACTTTGTC
GACCGTGCTGAAGCGGCAAATTGTACTGTGGTTGCGCGCTGGCGCAGAAA
GTCACGCCTATTATTCGCACCATGGGAGCGGAGGAGGTGGTCCCCGGGAA
CGGTTGCGGTGTGTGACTCCCACTTTTGCCAGTCACGGACCCGATTCCTT
GTTCCAAGCCCTGTTGACAGATTCTTTGGAGAACCTGTACAGTATCGCCT
TGGGTCAGACTCTCAGTCCCACCGTCACGGCAACTTTGCCTAGAAAAGGT
GTGGACCTTGCGCCCACCCACGCCGACTGCCGCGATGACTACACCGTGGA
TGACGGCATTGTCCGGTGCCAGCGGGGCTTTCCTTCCTTGGCCCCCCAAG
GTGTGATGCTTCGGAAAGGAAAATGGTACTACGAAGTGACCATTGTCAAG
CCCGGGCTGGCTCAGTTGGGGTGGGGAGATGGGGCCTTTGTGGGCCACTC
GTCTCGAGGCGAGGGAGTGGGAGATGACTTGCATTCCTGGGGCGTGGACG
GACATCGGGTGTACCGTTGGCACGGGGGGGGTGAGAAATGGGGCCTTCCG
TGGGTGGAGGGCGACGTGCTGGGCTTCGCCTGCGACTTGGAAGCCAGGAC
GTTATCCCTTTCTGTGAATGGATCCTGGGAGGCTCCGGTCGGGAGGGCTT
TCGAAGACATCGACTTTGTCGAAGGTCTCCGACCCTGCCTTACCCTCAAT
AAATCCTGTTCCTTCGGGGTATCCTTTGGAGGAGAAGGGGAAGCACCACT
CAAACATCGGCCTCCGGGACACAGAGCCGTGGCAGAGGCCGCAAAGGAGG
AAGCGTTGCGCCGCTGCTACTGGGGCTTCAGATTCCAGGTCACTCCGTCC
GAAGGGATTCGAGCCCGCACTTGCGAAGATTTCAAACCTGTCTGGAGATT
TCCCCCCTCCTCCTCCTCTGTCCCCCCTCCACCGGCCCTCGCCTTTCCTT
CCTCTGCCCAAGACCCTCGCCGGGCGCACTGCACGATTTGGCGACCCCGT
CCCGGGCTGGGGTATGCCGTGTTGGGCGACGTGATCACTCGGGGCGATGC
CCTTCCAGAGAGCATTTTGACTGTGGCTACCGACGAGAGTACCTTCCTCT
CTCCTCCGCGCGGCTACCGACTCCTTATGCCTTTGCCGCCGCCCAACCCC
CTTCGTCCGCCCACTAGCCAGTCCTCGGCACAGCAGCCTGGAGCTCTCTG
GCGCCCTATCCCGCCCCCAGGCTTTGTGGCCATGGGAGATGTCTTCTGGG
GTGGGAATTCAGAGCCTCCCTTGTCGTTGGTACGTTGCTTGCGAGAAGAT
GCCGTGGAGCCAGCAGCCCTCTTTGCCCGAATCCAGTCGTGTAAGGTCGG
GGACGGGATACCTGAAACCGGTCAAGCCAAAGACAGAGACGGCCCTGTGA
CGTTTTGGGGCGTGGGCAATCAGTCCCGGACGTTTTTCGCCGTTCCTGGA
CACGCCACGCCGCTTTCTCCCTCCTTTCCTGGTCCCATGGGCTGGGCTTT
GCGAACCTCCCTCCCCGGCATCACCTTGCCTCAAGGTTGGAGCTCAGAAA
AGGACGCGCAAGGACAACCCTCCATGGAATGGGCCCTGTGGGTATTGGAT
TGTTTCCTGGAGACATGTGCCTCCTGGGAATTGACGGCGGGTGGCATTTT
GTCCCGACGCACTTACGAAGCCCTCCTGACCTGCATCTTGGACGCGTCGC
ACTGCAGGGATCAAGCCCGTCTCCCCGCCGTCTCCCTTCTCACCCGCTTG
CTCCGGACGCGCCGAGGGCTGCTCATGTCTTCGGCCTACGATGGTCAAGA
TGTGGAGGACGGCTTGCCTCTCATGTCCCTCACCTCCCTTTCCTCTCTTC
CTCGAAGCGTCCTTGCCTTGGGGGAGGTCGCTCCTGCCTTGCTGCGTCAT
TGTCGGGAACAGATTCACCTGCATGGGCATCCCACAGAGGCTGTGACTGC
TTCTGGGTCGTGCTCCTCCCGCCTTTTCTTGCCTCGAGACCTGCAACAGA
TTCTGGAGCTTGTCACCACCATCAATTGGGCCGCACCCTTGCGTTTGGCG
GTCGAACGTGCCGTCTCCGCTTTTATTCCTTTCTCCCCTGCCTCCCTCAC
CCTTCTGCCCCTCCCTGCTGTCGGCTCTCTGCTTCGATCTCGGGGCATGG
ACGGGATCGCGACGCCTCAGACGATCCTGGAGCGAGTGCTGCTAGAGCTG
CAACGGGCGGCCCGAGGTGAACGAGGGAGTGACAAAGAAGCCTTGGAAGA
TTTGATGGGACTGGCAGAATTCTTGTGGAGGGGCGTGAAAGGGGACGGTC
GTAAAGGGAGGGGAAATGGAGGTGGGGTGGATGACGACGGCGGCCTCGAC
CGGATCCGTCGCCTGGACGGGTCGCCGACCTCGGGAACAGCCTCCCCGTT
GACGCTTCTGGGCGAGGAAGATGAGGCCTTTGTGGCGGCCTCGAGGAGTC
TGGGCAAGGAGAAGGAAGGAATCGTGGTGGCGCCGTTTTGCCAGACAGCG
CTAAAGGCCTGGCTGAGGTCCACGGCCAGCTCGGAGGTGGTGGAGTCACT
GCACCCTGTCAGCATGGCGCGTCTACGCGAAAAATCGGACGTCTGGGAGC
AGAGAGGCGAAGTGGTGTTGGAGGGGGCGGAGGCGGTGGAGGTCGTCTTT
GATGGTCGGAGTGACCTGCCGAGAGGTTTGTTCCTGACGTTAAAGGGCGG
GAATCCGAACGCCGATGCCCCCGAAGCGCTGTGGGACGGGGAGGAGGAAA
AGGAGAGCCTGGTAGTCTGGTCCAGTACCGGGGAGCGGAAACCGGGAGAG
TTCACGACGAGGCTGGTTTTCAAAGGGCCACGGGTCCAATGGTCTCTACT
GCCCGCGCATGAGAAGCGAAGGAAGGAAGGAGAGCAGCAGACGGAGCCCG
ACATGGGCGGGGCGACCGAGACAGAGGAAGGGGTACATGGAACGCCGGGT
CCTGCTTGGGTCTCGGCTGAGACCGCAGGACTTCCTGCCGGGCCGATGGC
GTCCTCCACGCGACTTGCCAGGACCGAAGCCGCGCCGCCCTCTCCCACGT
CGTCGGTGGTACGAAAAGGATCGACAGAACGATCCAGGACTTCTTTGTTG
GACGCAGGCCTGGAGATCAAGGAAGAAACGTGGGGCTTTGGCTTCACGGT
CCTCGCCAAAAGGATCACTCCCAGTCAGTCCCTGGCCAGATTGGTCCGAC
AGGTGCAAGACCACAACTGCGTGGTGGCATTTCCCTCGGAATGGTCCTTG
GATCAAGACGTGGCAGTGGTGGAATGGTTGAACACGGCCAGCGAAGCGCT
GGGTCGGGCGGCCGTGGACGTCTCCCCCTTTGACTTCCGCCACGGAGGGA
GGGAATCGTCGGTGGGACTGCACCTGGAGCATTGTCCCATGCCAGCCATA
TACCTGCGGATTGCCCTGATCCAGGGTTTTAACCAACACATCCAGCGCCT
CCTCCCCTTCGTGGACCTGGCGAACCCGTGTCGACACAGTCTGGGCGCCA
AGCTTCGGGCATTGGCCCCCCTGGTCCTACGGGACGTGAAGATGGCCGTG
GTGGAGGCCGGAAAGGAGCGGACCCTGGGCTCGGGCGGAAACTCCTTGAC
CATCACCCTCGACAACTTCGCTGCCTCCCGGTCGATGGAAGCCGCAGAAC
GCGACGTGACCACCAGTCGCTGCATCTTCGTTCAGGCCTTTAGGGCCCTT
CACCACAAAGACTCCCAGGTGCTGCGCTCCTGTTGGGACGGAGACCGCGT
CTTCCAAGTCACGTTTCGAGGAGAGAACGGCTCGGATGCCGGGGGGGTTT
TCCGCGAAGGCATGTCTCGGGTCCTGGAAGATTTGTACTCTCCTGAAACC
TTGAACCTGCTCATCCCTTGTCCCAACGCCCAGCACGGGCTCCCCACCAA
TACGGACAAATTTCTTCCCAACCCGCAGCTTGCCACCTGTCCCCTCGCTT
TGGAGATGTTTGAATTCGTTGGGAAATTGATGGGCATGTCCTTGCGAGCG
AACTTGTGCCTCCCTTTTCACTTCCCTTCCTTGATCTGGAAACGGCTACT
GGGACACGAAGTGCTCCGGAGCGACATGGAAGCCGTGGATACCTTGACGA
GCCGCCTCCTGGACTCGGTGCGAGGCTGCGAGGACGAGGCGGAGTTCGAA
GGGAAGTTTGGAGGAAGCTTGACCTTCGTGGCGACAGGGTATGACGGGGA
CGAGGTGGAACTCATACCCGGAGGTTCCATGGAAGACGTGACATTCGCGA
CCCGCCAGGCCTATTGCGACTTGCTATCGGAGCGATATCTGCACGATTCG
GACGCCCAGGTGGGAGCCATGGCCCGGGGACTGTATGCGGTGGTCGCTCG
GGACACGCTCTTGCTGTTGACCTGGCAAGAACTTGAAACCTTAGTGTGTG
GCTCTCCTACCTTCGACATGGCCTTCTGGAAGGCGCACACGACCTACGCG
GGGTACAGCAAGGACGACCTGACCATCCAGCTGTTTTGGAAGGTTCTAGA
ATCTTTCAGCCACGAAGAACAAAGTGGCTTCGTCCGCTTCGCCTGGGGTC
GCTCGCGGCTCCCCCCCAAGAACGCGTGGTACAAGAACATGCAGATCTCG
CGCCGAAACGCAGGCGAAGATTCCTTGCCCGCCAGCCACACGTGCTTCTT
CTCGATCGAGCTTCCGCCTTACCAGAGCGAAGCAGCCATGCGCAAGGGGC
TGTTGACAGCCATCACGCAAAGGAGACGGCAAACACAGAAATCGGAAGTC
CAGGAAAGCATGCTGCTCAGGACGAGCAATCGAATCGAACAGGGCATGTA
G
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protein sequence of rna7258

>rna7258-protein ID=rna7258-protein|Name=rna7258|organism=Nannochloropsis gaditana|type=polypeptide|length=179bp
MQRFWPYLFILSHLHVLLPKCLGAGDTNVLLLNHVSRECRNPETMAEFYT
SVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTG
NCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVP
GTDTRQVFAFDPEGNGLEFVYKPPPNQEL
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mRNA from alignment at CM002471.1:158525..159530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7258 ID=rna7258|Name=rna7258|organism=Nannochloropsis gaditana|type=mRNA|length=1006bp|location=Sequence derived from alignment at CM002471.1:158525..159530- (Nannochloropsis gaditana)
ACACGATGCGGACCTCACACATGTGTACGTCCTCCCGTTGCGTCCTGCTT GGTGGGTGTCGGTGGGCAAGGTGGATGAGATGAAACTTGCCTTAGATATA GCCGCCATATCACTGGAGGAGGAGGTTAAAAAGTCCTTGCAGAGCAGTAT GGAAAAAACAAACAGCAGGACTGCATCACAGTAGTTTTCGATCCAATAAT CTCGGAATCGTCATTTTTGTACGTCCATAAACACAGGTTGACAGGGTCGC TGCTTTGTGTGTGGCCATAATCATGCAGCGTTTTTGGCCATATTTATTCA TCCTCTCGCATCTCCATGTCCTTCTACCCAAGTGTCTTGGAGCGGGGGAT ACGAACGTTTTATTGCTCAACCACGTATCCCGCGAATGCCGCAACCCCGA AACAATGGCAGAATTCTACACCAGTGTCATGGGCTTCTCACGCGTGCCGG CGCCCCCTTTCCCCTTTGTGACCATCTGGTTGTACCATCCCAGCGGTGTC ACTATGCATCTCATCGAAGGTACGCCGGACTACGGCCTCGTGGAGGGGTC CGCTCGTGACGCGTCCACAGGAAATTGTAGTCAGCATGTATTTATGCAAG GAAACTTTGACCCAATCCATATCCGACGCGGTCACCATCTGGCCTGGACT GTAAAAGACTTAGAAAGCATCAAGGCGGCGTTGGGCACCCGAGGAATTCC CTTCGGAACGTCCACGGTACCAGGCACGGACACACGGCAAGTCTTTGCCT TCGACCCCGAAGGAAACGGGCTGGAATTTGTGTATAAACCACCACCGAAC CAGGAGCTGTGAAGAAACGGGAGGAAAAGACTTTGAAAGCAGACGATGAA AGACACGAACCCCTCTGCCTGAGCGTTTCGGCATTATTCTCCTTCATTTC ATTTTTTAAATAAGGCTAAACATTAATGCTTGCTCCCTTTGTACAATATT TTCATTCAAATGCCGTCAGGCCCTCAATTTGTCATCGCTCCAAATCTAGG CAAGCA
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Coding sequence (CDS) from alignment at CM002471.1:158525..159530-

>rna7258 ID=rna7258|Name=rna7258|organism=Nannochloropsis gaditana|type=CDS|length=540bp|location=Sequence derived from alignment at CM002471.1:158525..159530- (Nannochloropsis gaditana)
ATGCAGCGTTTTTGGCCATATTTATTCATCCTCTCGCATCTCCATGTCCT
TCTACCCAAGTGTCTTGGAGCGGGGGATACGAACGTTTTATTGCTCAACC
ACGTATCCCGCGAATGCCGCAACCCCGAAACAATGGCAGAATTCTACACC
AGTGTCATGGGCTTCTCACGCGTGCCGGCGCCCCCTTTCCCCTTTGTGAC
CATCTGGTTGTACCATCCCAGCGGTGTCACTATGCATCTCATCGAAGGTA
CGCCGGACTACGGCCTCGTGGAGGGGTCCGCTCGTGACGCGTCCACAGGA
AATTGTAGTCAGCATGTATTTATGCAAGGAAACTTTGACCCAATCCATAT
CCGACGCGGTCACCATCTGGCCTGGACTGTAAAAGACTTAGAAAGCATCA
AGGCGGCGTTGGGCACCCGAGGAATTCCCTTCGGAACGTCCACGGTACCA
GGCACGGACACACGGCAAGTCTTTGCCTTCGACCCCGAAGGAAACGGGCT
GGAATTTGTGTATAAACCACCACCGAACCAGGAGCTGTGA
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Synonyms
Publications