EWM23432.1, cds7241 (CDS) Nannochloropsis gaditana

Overview
NameEWM23432.1
Unique Namecds7241
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:158719..159258 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23432.1
Productlactoylglutathione lyase
Orig transcript idgnl|cribi|Naga_100238g5.1208.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:158719..159258 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029068Glyas_Bleomycin-R_OHBP_Dase
IPR025870Glyoxalase-like_dom
Homology
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|585104458|gb|EWM23432.1| (lactoylglutathione lyase [Nannochloropsis gaditana])

HSP 1 Score: 374.015 bits (959), Expect = 2.381e-131
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MQRFWPYLFILSHLHVLLPKCLGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPPNQEL 179
            MQRFWPYLFILSHLHVLLPKCLGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPPNQEL
Sbjct:    1 MQRFWPYLFILSHLHVLLPKCLGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPPNQEL 179          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|470482441|ref|XP_004343324.1| (glyoxalase family protein [Acanthamoeba castellanii str. Neff] >gi|440799434|gb|ELR20482.1| glyoxalase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 110.153 bits (274), Expect = 9.052e-27
Identity = 61/151 (40.40%), Postives = 80/151 (52.98%), Query Frame = 0
Query:   32 LNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRR-GHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFV---YKPPPNQE 178
             NH+S+E  N + M  FYT VMGF R+  PPFPF   WL+ P   ++H+IE  P   L EG           Q V      +P  ++R GHH+A+  +DL      L   GI F  S VP T  RQ+F FDP+GNG+E      +PPP +E
Sbjct:   53 FNHLSKETENVDEMIRFYTKVMGFRRIKRPPFPFAGAWLFMPPSTSLHIIEKDPSVDLPEGPCAAVKKMGNWQEVAK----NPASLKRVGHHMAFRTEDLGLTMELLKEYGIMFAESVVPQTGQRQLFFFDPDGNGIEICDCDVEPPPFEE 199          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|1137212709|gb|OMO80740.1| (hypothetical protein CCACVL1_12778 [Corchorus capsularis])

HSP 1 Score: 109.768 bits (273), Expect = 1.629e-25
Identity = 59/148 (39.86%), Postives = 76/148 (51.35%), Query Frame = 0
Query:   30 LLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEG--SARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPP 175
            + LNH+SRE  +   +A FY  V GF  + +P F F  IWL  P    MHLIE +PD  L EG  SA  A               DP H+ RGHH+ + V + +S   +L  +GI     T+P    RQVF FDP+GNGLE   +  P
Sbjct:  210 VCLNHISRESSDIRRLANFYNEVFGFEEIESPKFEFKVIWLTLPGATPMHLIERSPDTKLPEGPYSATSAVA-------------DPTHLPRGHHICFNVSNFDSFVQSLKDKGIETFQRTLPNGKVRQVFFFDPDGNGLEVASREDP 344          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|976917741|gb|KVI03117.1| (Glyoxalase-like domain-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 104.375 bits (259), Expect = 1.999e-25
Identity = 55/143 (38.46%), Postives = 76/143 (53.15%), Query Frame = 0
Query:   32 LNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGS-ARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKP 173
            LNHVSRE  + + +A+FY  + GF R+ +P F F  IWL       +HLIE  P   L EG  + +A+              DP ++ RGHHL ++V + +S    L  +GI     T P   T+QVF FDP+GNGLE   +P
Sbjct:    8 LNHVSRESSDIDRLAQFYQEIFGFERIESPKFEFKVIWLRQSPSFYLHLIERDPSTKLPEGPWSSNAAVA------------DPHNLHRGHHLCFSVSNFDSFVKTLKEKGIETHEKTQPNGKTKQVFFFDPDGNGLEVASQP 138          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|1204917881|ref|XP_021291735.1| (uncharacterized protein LOC110422230 [Herrania umbratica])

HSP 1 Score: 104.375 bits (259), Expect = 2.245e-25
Identity = 57/146 (39.04%), Postives = 77/146 (52.74%), Query Frame = 0
Query:   32 LNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEG--SARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPP 175
            +NH+SRE  +   +A+FY  + GF  + +P F F  IWL  P  V MHLIE +P   L EG  SA  A               DP H+ RGHH+ +TV + +S   +L  +GI     ++P    RQVF FDP+GNGLE   +  P
Sbjct:    9 VNHISRESSDIRRLADFYKEIFGFEEIESPNFEFKVIWLNLPGAVPMHLIERSPLTKLPEGPYSATSAVA-------------DPSHLPRGHHICFTVSNFDSFVQSLKDKGIETFQRSLPDGKVRQVFFFDPDGNGLEVASREDP 141          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|743786005|ref|XP_011026622.1| (PREDICTED: lactoylglutathione lyase [Populus euphratica] >gi|743786009|ref|XP_011026630.1| PREDICTED: lactoylglutathione lyase [Populus euphratica])

HSP 1 Score: 103.219 bits (256), Expect = 5.355e-25
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 0
Query:   32 LNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYK 172
            LNH+SRE  +   +A+FY  + GF  + +P F F  IWL       +HLIE +PD  L EG    AS              DP H+ RGHH+ ++V + +S   +L  +GI     +VP    RQVF FDP+GNGLE   +
Sbjct:    9 LNHISRESSDIRRLADFYKEIFGFEEIESPKFEFKVIWLKVSPDFAIHLIERSPDTQLPEGPYSAASPV-----------LDPTHLPRGHHVCFSVSNFDSCVQSLKDKGIKTFQRSVPNRPIRQVFFFDPDGNGLEVASR 138          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|661897356|emb|CDO99068.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 102.834 bits (255), Expect = 7.789e-25
Identity = 58/147 (39.46%), Postives = 77/147 (52.38%), Query Frame = 0
Query:   22 LGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLE 168
            + A     + LNHVSRE  + E +A+FY  V GF RV +P F F  IWL       +HLIE  P   L EG    +ST   +         DP H+ RGHH+ ++V + +S   A+  +GI     T P   T+Q F FDP+GNGLE
Sbjct:    1 MAAAAAKGVSLNHVSRESSDIERLAQFYIEVFGFQRVESPKFEFDVIWLKLEPSFYLHLIERDPTTKLPEGPW--SSTSAVA---------DPKHLPRGHHICFSVSNFDSFVQAVKEKGIQIHHRTQPDGKTKQAFFFDPDGNGLE 136          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|590658155|ref|XP_007034770.1| (PREDICTED: lactoylglutathione lyase isoform X1 [Theobroma cacao] >gi|508713799|gb|EOY05696.1| Lactoylglutathione lyase / glyoxalase I family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 102.064 bits (253), Expect = 1.488e-24
Identity = 56/146 (38.36%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   32 LNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEG--SARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLEFVYKPPP 175
            LNH+SRE  +   +A+FY  +  F  + +P F F  IWL  P    MHLIE +P   L EG  SA  A               DP H+ RGHH+ +TV + +S   +L  +GI     ++P    RQVF FDP+GNGLE   +  P
Sbjct:    9 LNHISRESSDIRRLADFYKEIFAFEEIESPNFEFKVIWLNLPGAFPMHLIERSPLTKLPEGPYSATSAVA-------------DPSHLPRGHHICFTVSNFDSFVQSLKDKGIETFQRSLPNGKVRQVFFFDPDGNGLEVASREDP 141          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|470121398|ref|XP_004296757.1| (PREDICTED: lactoylglutathione lyase [Fragaria vesca subsp. vesca])

HSP 1 Score: 102.064 bits (253), Expect = 1.553e-24
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 0
Query:   22 LGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPF-PFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLE 168
            + A     + LNH+SRE  +   +AEFY  + GF  + +P F  F  IWL  PS  +MHLIE  P Y L EG     S              DP H+ RGHH+ ++V + +S    L  +GI     ++P    RQVF FDP+GNGLE
Sbjct:    1 MAAAVAQGVSLNHISRESSDIRRLAEFYKEIFGFEEIESPNFGEFKVIWLNLPSTFSMHLIERNPTYQLPEGPWSATSPVA-----------DPSHLPRGHHICFSVSNFDSFVQTLKEKGIQTFQRSLPNGKVRQVFFFDPDGNGLE 137          
BLAST of EWM23432.1 vs. NCBI_GenBank
Match: gi|596289022|ref|XP_007226031.1| (lactoylglutathione lyase [Prunus persica])

HSP 1 Score: 99.7525 bits (247), Expect = 1.324e-23
Identity = 53/147 (36.05%), Postives = 71/147 (48.30%), Query Frame = 0
Query:   22 LGAGDTNVLLLNHVSRECRNPETMAEFYTSVMGFSRVPAPPFPFVTIWLYHPSGVTMHLIEGTPDYGLVEGSARDASTGNCSQHVFMQGNFDPIHIRRGHHLAWTVKDLESIKAALGTRGIPFGTSTVPGTDTRQVFAFDPEGNGLE 168
            + A     + LNH+SRE  +   +A FY  + GF  + +P   F  IWL  P     HLIE  PDY L EG     S              DP H+ RGHH+ ++V +  S    L  +GI     ++P    +QVF FDP+GNGLE
Sbjct:    1 MAAAVAEGVSLNHISRESSDIRRLANFYKEIFGFEEIESPNLEFKVIWLKGPGAFAFHLIERNPDYNLPEGPWSATSPVA-----------DPSHLPRGHHVCFSVSNFHSFVQTLKDKGIQTFEKSLPDGKVKQVFFFDPDGNGLE 136          
The following BLAST results are available for this feature:
BLAST of EWM23432.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104458|gb|EWM23432.1|2.381e-131100.00lactoylglutathione lyase [Nannochloropsis gaditana... [more]
gi|470482441|ref|XP_004343324.1|9.052e-2740.40glyoxalase family protein [Acanthamoeba castellani... [more]
gi|1137212709|gb|OMO80740.1|1.629e-2539.86hypothetical protein CCACVL1_12778 [Corchorus caps... [more]
gi|976917741|gb|KVI03117.1|1.999e-2538.46Glyoxalase-like domain-containing protein [Cynara ... [more]
gi|1204917881|ref|XP_021291735.1|2.245e-2539.04uncharacterized protein LOC110422230 [Herrania umb... [more]
gi|743786005|ref|XP_011026622.1|5.355e-2538.30PREDICTED: lactoylglutathione lyase [Populus euphr... [more]
gi|661897356|emb|CDO99068.1|7.789e-2539.46unnamed protein product [Coffea canephora][more]
gi|590658155|ref|XP_007034770.1|1.488e-2438.36PREDICTED: lactoylglutathione lyase isoform X1 [Th... [more]
gi|470121398|ref|XP_004296757.1|1.553e-2438.51PREDICTED: lactoylglutathione lyase [Fragaria vesc... [more]
gi|596289022|ref|XP_007226031.1|1.324e-2336.05lactoylglutathione lyase [Prunus persica][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7258rna7258Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications