rna7250, rna7250 (mRNA) Nannochloropsis gaditana

Overview
Namerna7250
Unique Namerna7250
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length663
Alignment locationCM002471.1:121084..121642 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101245g2.3818.mrna
Orig protein idgnl|cribi|Naga_101245g2.3818
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:121084..121642 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101245g2gene7015Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7250rna7250-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23439.1cds7233Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7250 ID=rna7250|Name=rna7250|organism=Nannochloropsis gaditana|type=mRNA|length=663bp
CGGAAGAGGCGGTCAGGCGTGTATTTGACTGGACGGATGATGCGGAGGAG
GCGCATCGGATCGCGCAGTCCTTCGACGAGGTTGCCATCGAGGTCTTCGA
GCGGGAGGCCGACGGCGGGTACACTCCTCTCCCTCCCTTCCTCCCTCCCT
TCCTCCCTCCCTTTCTCCCTTTCTCCCTTCCTCCCTTCCTCTCTCATCCT
TTCGTGGAGACCCCTACTTCATACAAGTGTCCTTCCTCTCCATACACTTC
CACCTCCTTCTTCTCGGCACCTCCCTCTCGCGCTCCCACCTGCATGCTCG
CTTCGCCCATCCAGCCCCCCCTCCCTCCCGCCCTCCCTCCCTCCCTCCCT
CCCTCAGAAGCTTGACCGCCCTTCCGGGTAGCATTGAGCTTCTCGCCGAC
TTGGCCGAGAGCGAGATACCCTCCTCCGTGCTATCCAACCTCCCTTTGGA
GGTGATCGAGAAAGTTCTAGAACGAATTGGCATCAAAGACTTGGTGGAAT
GCATTGAGACCTACGACGATCGCCTTAAGACGGAAGCGCAGCTCCTCCTG
AACGCCTGCTTGGAAATGGAGCGCCCCCCCCGGCACGCTTGTTTTTTCGA
TTTCTCCGCCCGAGGCATCGATACCGCCCATGACAACGACATGCGGGTCG
GTCCCTTCCCCCC
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protein sequence of rna7250

>rna7250-protein ID=rna7250-protein|Name=rna7250|organism=Nannochloropsis gaditana|type=polypeptide|length=147bp
PSLPPSLPPSLPPSLPPSRPPSLSCIIAPGYHPSTYPSPKTLFLPFRAFP
SLPSLFFPHAPPLSPTSSPPTFPPSPSSPPQKEFRYEKGKDGKLSPTSAY
LATEQKRVEQRERRLRRGRGPPEEGASKFLSRGGTGGGREGGEEEEG
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mRNA from alignment at CM002471.1:121084..121642+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7250 ID=rna7250|Name=rna7250|organism=Nannochloropsis gaditana|type=mRNA|length=559bp|location=Sequence derived from alignment at CM002471.1:121084..121642+ (Nannochloropsis gaditana)
ccctccctccctccctccctccctccctccctcccgccctccctcccgcc
ctcccgccctccctccttgtcctgtaTCATCGCTCCAGGCTATCATCCCT
CCACATATCCGTCTCCAAAGACTctatttcttccttttcgggcctttccc
tcgctgccgtctctcttcttccctcatgCCCCACCTTTGTCTCcaacgtc
ctcccctcctacttttcctccttccccctcctccccaccccaaaAAGAAT
TCCGTTATGAGAAGGGCAAAGATGGGAAGCTCTCTCCGACTTCCGCCTAC
CTGGCCACGGAGCAAAAGCGAGTGGAacagagggagcggaggttgaggcg
gggcagagggcctccagaggaaggggccagTAAATTTTtgtcgaggggag
ggaccgggggaggaagggagggaggagaggaggaggaaggatagTAAATA
CgtctggaaaggaaagggagggtatAGCTCAAGCGTGCAAGCAACATTGA
GATTATAATGTGAACATACAATAAAGGGAAGTTAGATATCTTCTATTTTG
ATCTTTTCT
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Coding sequence (CDS) from alignment at CM002471.1:121084..121642+

>rna7250 ID=rna7250|Name=rna7250|organism=Nannochloropsis gaditana|type=CDS|length=444bp|location=Sequence derived from alignment at CM002471.1:121084..121642+ (Nannochloropsis gaditana)
ccctccctccctccctccctccctccctccctcccgccctccctcccgcc
ctcccgccctccctccttgtcctgtaTCATCGCTCCAGGCTATCATCCCT
CCACATATCCGTCTCCAAAGACTctatttcttccttttcgggcctttccc
tcgctgccgtctctcttcttccctcatgCCCCACCTTTGTCTCcaacgtc
ctcccctcctacttttcctccttccccctcctccccaccccaaaAAGAAT
TCCGTTATGAGAAGGGCAAAGATGGGAAGCTCTCTCCGACTTCCGCCTAC
CTGGCCACGGAGCAAAAGCGAGTGGAacagagggagcggaggttgaggcg
gggcagagggcctccagaggaaggggccagTAAATTTTtgtcgaggggag
ggaccgggggaggaagggagggaggagaggaggaggaaggatag
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Synonyms
Publications