EWM23439.1, cds7233 (CDS) Nannochloropsis gaditana

Overview
NameEWM23439.1
Unique Namecds7233
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:121084..121527 +

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Properties
Property NameValue
Start range121084
Start range.
Protein idEWM23439.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101245g2.3818.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:121084..121527 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23439.1 vs. NCBI_GenBank
Match: gi|585104469|gb|EWM23439.1| (hypothetical protein Naga_101245g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 271.937 bits (694), Expect = 5.252e-92
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0 
Query:    1 PSLPPSLPPSLPPSLPPSRPPSLSCIIAPGYHPSTYPSPKTLFLPFRAFPSLPSLFFPHAPPLSPTSSPPTFPPSPSSPPQKEFRYEKGKDGKLSPTSAYLATEQKRVEQRERRLRRGRGPPEEGASKFLSRGGTGGGREGGEEEEG 147
            PSLPPSLPPSLPPSLPPSRPPSLSCIIAPGYHPSTYPSPKTLFLPFRAFPSLPSLFFPHAPPLSPTSSPPTFPPSPSSPPQKEFRYEKGKDGKLSPTSAYLATEQKRVEQRERRLRRGRGPPEEGASKFLSRGGTGGGREGGEEEEG
Sbjct:    1 PSLPPSLPPSLPPSLPPSRPPSLSCIIAPGYHPSTYPSPKTLFLPFRAFPSLPSLFFPHAPPLSPTSSPPTFPPSPSSPPQKEFRYEKGKDGKLSPTSAYLATEQKRVEQRERRLRRGRGPPEEGASKFLSRGGTGGGREGGEEEEG 147
The following BLAST results are available for this feature:
BLAST of EWM23439.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104469|gb|EWM23439.1|5.252e-92100.00hypothetical protein Naga_101245g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7250rna7250Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications