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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101389g1.4399.mrna |
| Orig protein id | gnl|cribi|Naga_101389g1.4399 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:108636..110194 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7244 ID=rna7244|Name=rna7244|organism=Nannochloropsis gaditana|type=mRNA|length=1070bp
GGATACAGGTGCATTGGCGGGACGTGGTTGGCTTGCTGTTCAAGTGCTGG
TGCTTTGCCGCCTCCTACTAGGAGCTTCAAGGCTGCATCATGAAAGCTTT
CTTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGCCGTGGCTCCACGTCT
TTGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCTGACATAAAAGCCTTC
TCTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCTACCTACCGTATTGGA
GCCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAATAAGGGTAGGAACAT
GCCTACAATGTGAAAACTACGAACATGGAGCCCATGGAGCCGTGCAATCG
TCGCACGAAGGACAGACTGATCATGTTTGCCAGGGCAAGCCAGCATTGAC
ATGCAATGAAGACCCCGTGGTAACAAAAAAGGGCGAGAAGAGGGGCCTGG
ACAGGGTGCGTTCCTCCAAGGGCCTTCCAGGAAGGGAAGAGGGAGAAGGA
GGGAATGTGGTCGAGCTCTTGAAAGCCAGCAGCGCTGTCCTCTTGGCGGC
GATAGGACCGAATCCATGGGACAGAGGCCTGGGCATCAACCCGACCCCGC
CGAGCGCCTTGGCCATGTGGGGGCCTTACGTCGGGACGCTCCTCTTCCTC
ACATTTGGGATGCGGGGGCTGGAGCCACTGAAGCGCTTCCTCTACGACCG
GCAGAAACGGAGGAAGCAGGCGAAGAAGGCCGCCCAAAAGCCCAAGAAGA
ACCAGTACTACCGCACCCCTTCCCGGCTCTACGACCTGGCCAAGGCCAAG
CTTGAGCAGAGGCAGGAGGGAGGGACGGAAGCAGGTGCGGAGGGAGGGAG
GGCGGGAGGGAGGGAGTTGCAGTAGCACGACCGGATGCCAGGGCAACAAG
GAGCGAGGGGCGAAGAGAGAGAAGCGGTGGTGGTTTGTAAGCTTGTTCTC
ATTCACGTGCATCCCTCCCATCCTCCCTCTCTCCCTTCCACCCTCCCTTC
CTCCCTCCCTTCCTTTTTCCCTCCCCATACCCCACGCAGTCGAAGGGACC
TCGGATACGGCTGCCAGTGG back to topprotein sequence of rna7244 >rna7244-protein ID=rna7244-protein|Name=rna7244|organism=Nannochloropsis gaditana|type=polypeptide|length=259bp
MKAFLRPEYAKRTKLPWLHVFVCCLGVFCLLPDIKAFSPCLHLPGSSFLP
TVLEPQARLGGRGRRIRVGTCLQCENYEHGAHGAVQSSHEGQTDHVCQGK
PALTCNEDPVVTKKGEKRGLDRVRSSKGLPGREEGEGGNVVELLKASSAV
LLAAIGPNPWDRGLGINPTPPSALAMWGPYVGTLLFLTFGMRGLEPLKRF
LYDRQKRRKQAKKAAQKPKKNQYYRTPSRLYDLAKAKLEQRQEGGTEAVE
GTSDTAASG back to topmRNA from alignment at CM002471.1:108636..110194- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7244 ID=rna7244|Name=rna7244|organism=Nannochloropsis gaditana|type=mRNA|length=1559bp|location=Sequence derived from alignment at CM002471.1:108636..110194- (Nannochloropsis gaditana)
GATACAGGTGCATTGGCGGGACGTGGTTGGCTTGCTGTTCAAGTGCTGGT
GCTTTGCCGCCTCCTACTAGGAGCTTCAAGGCTGCATCATGAAAGCTTTC
TTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGCCGTGGCTCCACGTCTT
TGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCTGACATAAAAGCCTTCT
CTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCTACCTACCGTATTGGAG
CCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAATAAGGGTAGGAACATG
CCTACAATGTGAAAACTACGAACATGGAGCCCATGGAGCCGTGCAATCGT
CGCACGAAGGACAGGTAGTCTTTGAGATAGTCTGTTGATCACACAAATTC
TTGTGCAACCTCCCCCCTCTCTCCCTCCCTACCTACCTACCTCCCTTCCT
CTGCGATTCCTCTCATCGCCCCCTGCATTTCCACCAGACTGATCATGTTT
GCCAGGGCAAGCCAGCATTGACATGCAATGAAGACCCCGTGGTAACAAAA
AAGGGCGAGAAGAGGGGCCTGGACAGGGTGCGTTCCTCCAAGGGCCTTCC
AGGAAGGGAAGAGGGAGAAGGAGGGAATGTGGTCGAGCTCTTGAAAGCCA
GCAGCGCTGTCCTCTTGGCGGCGATAGGACCGAATCCATGGGACAGGTCC
GTGGCACCGTTCCCTCCCTCCCTCCCTCAATCCCTCCCTCCCTGTCTCGC
TTCTCTCCCTCTTGTCGACCGACACTCGCCCTCCTTCATCTCCTCTTTCC
CTTTCTCCGTTCCCCCTGCCCCGACTTGTTCCCTCCCTCAACCCACACCT
GGCCTTCCCCTTTCTCCCTCCCTCCCTCCCACCCTCCCTCCCTCCCTCCC
TCCCTCCAGAGGCCTGGGCATCAACCCGACCCCGCCGAGCGCCTTGGCCA
TGTGGGGGCCTTACGTCGGGACGCTCCTCTTCCTCACATTTGGGATGCGG
GGGCTGGAGCCACTGAAGCGCTTCCTCTACGACCGGCAGAAACGGAGGAA
GCAGGCGAAGAAGGGTGAGGGAGAAAGGGAGGGAGGAAGCAAAGGAAGCA
CAGGAAGGAAGGACGGACTCATTTACTCAAGCTTGTTCCTCCTGTCTTTC
CCTCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCTCCCCCTC
GCCCCCTCCGGATCGCAGCCGCCCAAAAGCCCAAGAAGAACCAGTACTAC
CGCACCCCTTCCCGGCTCTACGACCTGGCCAAGGCCAAGCTTGAGCAGAG
GCAGGAGGGAGGGACGGAAGCAGGTGCGGAGGGAGGGAGGGCGGGAGGGA
GGGAGTTGCAGTAGCACGACCGGATGCCAGGGCAACAAGGAGCGAGGGGC
GAAGAGAGAGAAGCGGTGGTGGTTTGTAAGCTTGTTCTCATTCACGTGCA
TCCCTCCCATCCTCCCTCTCTCCCTTCCACCCTCCCTTCCTCCCTCCCTT
CCTTTTTCCCTCCCCATACCCCACGCAGTCGAAGGGACCTCGGATACGGC
TGCCAGTGG back to topCoding sequence (CDS) from alignment at CM002471.1:108636..110194- >rna7244 ID=rna7244|Name=rna7244|organism=Nannochloropsis gaditana|type=CDS|length=3880bp|location=Sequence derived from alignment at CM002471.1:108636..110194- (Nannochloropsis gaditana)
TCGAAGGGACCTCGGATACGGCTGCCAGTGGCCGCCCAAAAGCCCAAGAA
GAACCAGTACTACCGCACCCCTTCCCGGCTCTACGACCTGGCCAAGGCCA
AGCTTGAGCAGAGGCAGGAGGGAGGGACGGAAGCAGAGGCCTGGGCATCA
ACCCGACCCCGCCGAGCGCCTTGGCCATGTGGGGGCCTTACGTCGGGACG
CTCCTCTTCCTCACATTTGGGATGCGGGGGCTGGAGCCACTGAAGCGCTT
CCTCTACGACCGGCAGAAACGGAGGAAGCAGGCGAAGAAGGACTGATCAT
GTTTGCCAGGGCAAGCCAGCATTGACATGCAATGAAGACCCCGTGGTAAC
AAAAAAGGGCGAGAAGAGGGGCCTGGACAGGGTGCGTTCCTCCAAGGGCC
TTCCAGGAAGGGAAGAGGGAGAAGGAGGGAATGTGGTCGAGCTCTTGAAA
GCCAGCAGCGCTGTCCTCTTGGCGGCGATAGGACCGAATCCATGGGACAG
ATGAAAGCTTTCTTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGCCGTG
GCTCCACGTCTTTGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCTGACA
TAAAAGCCTTCTCTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCTACCT
ACCGTATTGGAGCCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAATAAG
GGTAGGAACATGCCTACAATGTGAAAACTACGAACATGGAGCCCATGGAG
CCGTGCAATCGTCGCACGAAGGACAGTCGAAGGGACCTCGGATACGGCTG
CCAGTGGCCGCCCAAAAGCCCAAGAAGAACCAGTACTACCGCACCCCTTC
CCGGCTCTACGACCTGGCCAAGGCCAAGCTTGAGCAGAGGCAGGAGGGAG
GGACGGAAGCAGAGGCCTGGGCATCAACCCGACCCCGCCGAGCGCCTTGG
CCATGTGGGGGCCTTACGTCGGGACGCTCCTCTTCCTCACATTTGGGATG
CGGGGGCTGGAGCCACTGAAGCGCTTCCTCTACGACCGGCAGAAACGGAG
GAAGCAGGCGAAGAAGGACTGATCATGTTTGCCAGGGCAAGCCAGCATTG
ACATGCAATGAAGACCCCGTGGTAACAAAAAAGGGCGAGAAGAGGGGCCT
GGACAGGGTGCGTTCCTCCAAGGGCCTTCCAGGAAGGGAAGAGGGAGAAG
GAGGGAATGTGGTCGAGCTCTTGAAAGCCAGCAGCGCTGTCCTCTTGGCG
GCGATAGGACCGAATCCATGGGACAGATGAAAGCTTTCTTGCGCCCAGAG
TATGCAAAAAGGACAAAGCTGCCGTGGCTCCACGTCTTTGTGTGTTGTCT
AGGCGTTTTTTGCCTCCTCCCTGACATAAAAGCCTTCTCTCCCTGCCTCC
ACCTCCCCGGCTCCTCCTTCCTACCTACCGTATTGGAGCCACAAGCCCGC
CTGGGTGGTCGAGGACGAAGAATAAGGGTAGGAACATGCCTACAATGTGA
AAACTACGAACATGGAGCCCATGGAGCCGTGCAATCGTCGCACGAAGGAC
AGTCGAAGGGACCTCGGATACGGCTGCCAGTGGCCGCCCAAAAGCCCAAG
AAGAACCAGTACTACCGCACCCCTTCCCGGCTCTACGACCTGGCCAAGGC
CAAGCTTGAGCAGAGGCAGGAGGGAGGGACGGAAGCAGAGGCCTGGGCAT
CAACCCGACCCCGCCGAGCGCCTTGGCCATGTGGGGGCCTTACGTCGGGA
CGCTCCTCTTCCTCACATTTGGGATGCGGGGGCTGGAGCCACTGAAGCGC
TTCCTCTACGACCGGCAGAAACGGAGGAAGCAGGCGAAGAAGGACTGATC
ATGTTTGCCAGGGCAAGCCAGCATTGACATGCAATGAAGACCCCGTGGTA
ACAAAAAAGGGCGAGAAGAGGGGCCTGGACAGGGTGCGTTCCTCCAAGGG
CCTTCCAGGAAGGGAAGAGGGAGAAGGAGGGAATGTGGTCGAGCTCTTGA
AAGCCAGCAGCGCTGTCCTCTTGGCGGCGATAGGACCGAATCCATGGGAC
AGATGAAAGCTTTCTTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGCCG
TGGCTCCACGTCTTTGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCTGA
CATAAAAGCCTTCTCTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCTAC
CTACCGTATTGGAGCCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAATA
AGGGTAGGAACATGCCTACAATGTGAAAACTACGAACATGGAGCCCATGG
AGCCGTGCAATCGTCGCACGAAGGACAGTCGAAGGGACCTCGGATACGGC
TGCCAGTGGCCGCCCAAAAGCCCAAGAAGAACCAGTACTACCGCACCCCT
TCCCGGCTCTACGACCTGGCCAAGGCCAAGCTTGAGCAGAGGCAGGAGGG
AGGGACGGAAGCAGAGGCCTGGGCATCAACCCGACCCCGCCGAGCGCCTT
GGCCATGTGGGGGCCTTACGTCGGGACGCTCCTCTTCCTCACATTTGGGA
TGCGGGGGCTGGAGCCACTGAAGCGCTTCCTCTACGACCGGCAGAAACGG
AGGAAGCAGGCGAAGAAGGACTGATCATGTTTGCCAGGGCAAGCCAGCAT
TGACATGCAATGAAGACCCCGTGGTAACAAAAAAGGGCGAGAAGAGGGGC
CTGGACAGGGTGCGTTCCTCCAAGGGCCTTCCAGGAAGGGAAGAGGGAGA
AGGAGGGAATGTGGTCGAGCTCTTGAAAGCCAGCAGCGCTGTCCTCTTGG
CGGCGATAGGACCGAATCCATGGGACAGATGAAAGCTTTCTTGCGCCCAG
AGTATGCAAAAAGGACAAAGCTGCCGTGGCTCCACGTCTTTGTGTGTTGT
CTAGGCGTTTTTTGCCTCCTCCCTGACATAAAAGCCTTCTCTCCCTGCCT
CCACCTCCCCGGCTCCTCCTTCCTACCTACCGTATTGGAGCCACAAGCCC
GCCTGGGTGGTCGAGGACGAAGAATAAGGGTAGGAACATGCCTACAATGT
GAAAACTACGAACATGGAGCCCATGGAGCCGTGCAATCGTCGCACGAAGG
ACAGTCGAAGGGACCTCGGATACGGCTGCCAGTGGCCGCCCAAAAGCCCA
AGAAGAACCAGTACTACCGCACCCCTTCCCGGCTCTACGACCTGGCCAAG
GCCAAGCTTGAGCAGAGGCAGGAGGGAGGGACGGAAGCAGAGGCCTGGGC
ATCAACCCGACCCCGCCGAGCGCCTTGGCCATGTGGGGGCCTTACGTCGG
GACGCTCCTCTTCCTCACATTTGGGATGCGGGGGCTGGAGCCACTGAAGC
GCTTCCTCTACGACCGGCAGAAACGGAGGAAGCAGGCGAAGAAGGACTGA
TCATGTTTGCCAGGGCAAGCCAGCATTGACATGCAATGAAGACCCCGTGG
TAACAAAAAAGGGCGAGAAGAGGGGCCTGGACAGGGTGCGTTCCTCCAAG
GGCCTTCCAGGAAGGGAAGAGGGAGAAGGAGGGAATGTGGTCGAGCTCTT
GAAAGCCAGCAGCGCTGTCCTCTTGGCGGCGATAGGACCGAATCCATGGG
ACAGATGAAAGCTTTCTTGCGCCCAGAGTATGCAAAAAGGACAAAGCTGC
CGTGGCTCCACGTCTTTGTGTGTTGTCTAGGCGTTTTTTGCCTCCTCCCT
GACATAAAAGCCTTCTCTCCCTGCCTCCACCTCCCCGGCTCCTCCTTCCT
ACCTACCGTATTGGAGCCACAAGCCCGCCTGGGTGGTCGAGGACGAAGAA
TAAGGGTAGGAACATGCCTACAATGTGAAAACTACGAACATGGAGCCCAT
GGAGCCGTGCAATCGTCGCACGAAGGACAG back to top
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