rna7226, rna7226 (mRNA) Nannochloropsis gaditana

Overview
Namerna7226
Unique Namerna7226
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1239
Alignment locationCM002471.1:58951..60045 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101315g2.4734.mrna
Orig protein idgnl|cribi|Naga_101315g2.4734
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:58951..60045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101315g2gene6989Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7226rna7226-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23463.1cds7209Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7226 ID=rna7226|Name=rna7226|organism=Nannochloropsis gaditana|type=mRNA|length=1239bp
TTCTCCTTTGGACAGGCGGGGTACTCCTTGATTTTCATTCCAGTGTCCCT
CTCGCAGTGGGCGTGGAACACGTGCTCCCATGTCCTCGCATTCGCGCACC
ACCGCTACACTAGCAAAGGACATGACGACATCCTCCTTCCCGCCGGAGTC
GTCACCGAGGTCTATCAAGCCACGCCCTCCGCCCCGACCTCCCTCCCTCC
CTCCGCCCGTGCCTCCGTCCCTCCCTCCTTCCCTTCCTCGATGGAAGGGG
AGGAAGAAACCAAGATGGAGGGAGACTACGCAACGCTGAAGGTTTGAGGG
GAAATAAAGGAGGAGGGAAGGAAGGGAGGAGGGAGAAAGGGGGATGTATG
TGCCATGGGGTTGGGGCTTCCACATAGCGAAGGGTAGGGAAGAAACGAGA
AGAGGAAAGGAGGTGGGGGGGGGGGCTCTGTGCTTGATTGAACAGCGTGT
TATATGTGATGGACTGAGTCAGGCGCTGTTGAAGGGGTCGGGGGGGGCGG
TGTGCTGATGATGGGGAAAGGGGGGGTTAGTGAATGGCCGAAAGGTACTT
GGAGGGAAGGGCGAGAGAGAGGATGAGGCAGATGAGCGGGGAAAGGAAGG
ACATCCAGGGGGAGAGAATGAAACAAAAATGTATGACGGGGCAAGGGAGA
GCGAGGGTGGAATTGAAAGCGAGTCACCACGGGGATTGGGACAGATGCAG
GAGAGGCGGGAGACCCGGCCCCCCTCACCCCCGTCCTCCCCCCCTTCCTC
CCCCCCGTCCTCCTCCGCCACCTCCGCCTCTCACGTCTTTCTCGGACAAA
GGATCTCGGGGCTGGGAGCGGGATGGGTGCATGGGCATGATACGCCGTCA
GAAAGTGACGTTGATGGGGGTGAGCACCATCCTAGTCGCTGCCGATTATC
GTCATGATAAGGATGATAAGTGTAGGAGGGCATAAAAGGGGAGGCCGTGC
AGTTTAGGTGCGAAGGAAGGAGAGGGGACTAGCCTTCGACGCCGTTTGTA
GTAGGGAAACGGGGAAAGGGGAAAGACATTGCATAAACAACATGTGCAGT
TGCCCTTTGATCAGGGCCGTAAATATCCGGTTTTAAAATATCTTTTGGGT
AGGGCACGATGCCTCGGTGTCTTCTCTCTCGTTACATGCCCGCGTTCCTT
CCGTGCAGCCTGCTGGCTGTAGTGTGGCACATTTTTTCTTCCTTGTAACT
ATGGGAGTCCCGGGAGTCGGAGAGGGAAAGATTTCTTCC
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protein sequence of rna7226

>rna7226-protein ID=rna7226-protein|Name=rna7226|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MDQTVSLGGSAPEERPATEAKGFDWAEKREEASRTVKETAAYLQEHGQKT
VTYLKTHGAAAAGAAAATSQRTREEVVREWIKSTGLGSIVYRSLVPGHWR
MPAISLGVTLALLAAAIAIVVATGGGALLILMLLVLTLFNQMVHAYCDGG
E
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mRNA from alignment at CM002471.1:58951..60045-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7226 ID=rna7226|Name=rna7226|organism=Nannochloropsis gaditana|type=mRNA|length=1095bp|location=Sequence derived from alignment at CM002471.1:58951..60045- (Nannochloropsis gaditana)
TATTTCTTAACAGATCAATTGTTTGATTCAAGACATACATCGAAATATTC
ATGGATCAAACCGTTTCTTTGGGCGGCTCTGCACCGGTAGGTGACTCTTG
AAACTATTCTGTCTTTATCATACTATACATATTTTTCATAACGCACTGTT
CCCATCCATCTTCACGCGTTCGCGCTCGGACTTACTTTTTGATATCCCAC
CCACGATTTCGTGATTTTTAAATGTCTCATGAATCATTCTCTTTACTCCT
TCATGCCGTTTCTTCCGCGCACTGCCCGACGCTCCTCCTCTGCTCCCTCC
TTCCTTTTTCCCTCAAGGAGGAAAGACCTGCAACGGAGGCGAAAGGCTTC
GACTGGGCAGAAAAAAGGGAAGAAGCCTCGAGGACCGTCAAAGAAACGGC
CGCTTATCTCCAGGTAAGGGGGACCAGAGATACGGATCCGGGGTGGGTGC
TGCTGAAAAAGACATGTCGAAGTTAAAGCTTGGCGGAGAAGGCGCCTTCT
TGACCGCAATTCACTGCAGTGTGTCTTGGACGCCACTCGCCTGTTCACGT
ACACACAATTTCTTGGCAGGAACATGGTCAAAAAACTGTCACGTACCTAA
AGACGCACGGGGCTGCTGCGGCCGGCGCCGCGGCAGCCACGAGCCAACGC
ACCCGGGAGGAGGTGGTGCGCGAATGGATCAAAAGCACGGGGCTGGGGTC
GATCGTGTACCGGAGCCTGGTCCCCGGGCATTGGCGGATGCCGGCCATCT
CTCTCGGGGTAGGCTGGGAGGGTGGAGGGGGGCTGTCGGGGTGGGGAATC
GCACTCGCTGTTCTGGTCAGAGGGGAGGGCCGCGCGCGCCACGCGGTGGG
CTCGTGAGATCCCATCCTCTCTATTCCACCTTCAAACTCCCTCGCATCGC
GATGGGCCTGTGAGAGTCATCCTCTTAATTACATTCCCTCGCTATTACCG
GGGTCTGACGCAGGTGACTTTGGCCTTGCTGGCAGCGGCCATCGCCATCG
TTGTCGCTACGGGGGGGGGCGCTCTCCTGATCTTGATGCTCCTCGTTTTG
ACCCTATTCAACCAAATGGTCCACGCGTACTGTGATGGTGGGGAG
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Coding sequence (CDS) from alignment at CM002471.1:58951..60045-

>rna7226 ID=rna7226|Name=rna7226|organism=Nannochloropsis gaditana|type=CDS|length=1812bp|location=Sequence derived from alignment at CM002471.1:58951..60045- (Nannochloropsis gaditana)
GTGACTTTGGCCTTGCTGGCAGCGGCCATCGCCATCGTTGTCGCTACGGG
GGGGGGCGCTCTCCTGATCTTGATGCTCCTCGTTTTGACCCTATTCAACC
AAATGGTCCACGCGTACTGTGATGGTGGGGAGGAACATGGTCAAAAAACT
GTCACGTACCTAAAGACGCACGGGGCTGCTGCGGCCGGCGCCGCGGCAGC
CACGAGCCAACGCACCCGGGAGGAGGTGGTGCGCGAATGGATCAAAAGCA
CGGGGCTGGGGTCGATCGTGTACCGGAGCCTGGTCCCCGGGCATTGGCGG
ATGCCGGCCATCTCTCTCGGGGAGGAAAGACCTGCAACGGAGGCGAAAGG
CTTCGACTGGGCAGAAAAAAGGGAAGAAGCCTCGAGGACCGTCAAAGAAA
CGGCCGCTTATCTCCAGATGGATCAAACCGTTTCTTTGGGCGGCTCTGCA
CCGGTGACTTTGGCCTTGCTGGCAGCGGCCATCGCCATCGTTGTCGCTAC
GGGGGGGGGCGCTCTCCTGATCTTGATGCTCCTCGTTTTGACCCTATTCA
ACCAAATGGTCCACGCGTACTGTGATGGTGGGGAGGAACATGGTCAAAAA
ACTGTCACGTACCTAAAGACGCACGGGGCTGCTGCGGCCGGCGCCGCGGC
AGCCACGAGCCAACGCACCCGGGAGGAGGTGGTGCGCGAATGGATCAAAA
GCACGGGGCTGGGGTCGATCGTGTACCGGAGCCTGGTCCCCGGGCATTGG
CGGATGCCGGCCATCTCTCTCGGGGAGGAAAGACCTGCAACGGAGGCGAA
AGGCTTCGACTGGGCAGAAAAAAGGGAAGAAGCCTCGAGGACCGTCAAAG
AAACGGCCGCTTATCTCCAGATGGATCAAACCGTTTCTTTGGGCGGCTCT
GCACCGGTGACTTTGGCCTTGCTGGCAGCGGCCATCGCCATCGTTGTCGC
TACGGGGGGGGGCGCTCTCCTGATCTTGATGCTCCTCGTTTTGACCCTAT
TCAACCAAATGGTCCACGCGTACTGTGATGGTGGGGAGGAACATGGTCAA
AAAACTGTCACGTACCTAAAGACGCACGGGGCTGCTGCGGCCGGCGCCGC
GGCAGCCACGAGCCAACGCACCCGGGAGGAGGTGGTGCGCGAATGGATCA
AAAGCACGGGGCTGGGGTCGATCGTGTACCGGAGCCTGGTCCCCGGGCAT
TGGCGGATGCCGGCCATCTCTCTCGGGGAGGAAAGACCTGCAACGGAGGC
GAAAGGCTTCGACTGGGCAGAAAAAAGGGAAGAAGCCTCGAGGACCGTCA
AAGAAACGGCCGCTTATCTCCAGATGGATCAAACCGTTTCTTTGGGCGGC
TCTGCACCGGTGACTTTGGCCTTGCTGGCAGCGGCCATCGCCATCGTTGT
CGCTACGGGGGGGGGCGCTCTCCTGATCTTGATGCTCCTCGTTTTGACCC
TATTCAACCAAATGGTCCACGCGTACTGTGATGGTGGGGAGGAACATGGT
CAAAAAACTGTCACGTACCTAAAGACGCACGGGGCTGCTGCGGCCGGCGC
CGCGGCAGCCACGAGCCAACGCACCCGGGAGGAGGTGGTGCGCGAATGGA
TCAAAAGCACGGGGCTGGGGTCGATCGTGTACCGGAGCCTGGTCCCCGGG
CATTGGCGGATGCCGGCCATCTCTCTCGGGGAGGAAAGACCTGCAACGGA
GGCGAAAGGCTTCGACTGGGCAGAAAAAAGGGAAGAAGCCTCGAGGACCG
TCAAAGAAACGGCCGCTTATCTCCAGATGGATCAAACCGTTTCTTTGGGC
GGCTCTGCACCG
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Synonyms
Publications