rna7216, rna7216 (mRNA) Nannochloropsis gaditana

Overview
Namerna7216
Unique Namerna7216
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1043
Alignment locationCM002471.1:28642..29511 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101028g3.92.mrna
Orig protein idgnl|cribi|Naga_101028g3.92
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:28642..29511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101028g3gene6978Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23474.1cds7199Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7216rna7216-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7216 ID=rna7216|Name=rna7216|organism=Nannochloropsis gaditana|type=mRNA|length=1043bp
GTAGATCGATGAGTTTCAACCCCTGTCCTGCCAGCGCCCCTCCCTCCTGG
TACCCCGGCGAAGGCCTCCTAGTCACTGCAGATAATGTGGAGTTCTCGCT
GTCCCTCGGCCGGCTTCCCCCTCGACAGAGCAAGGCCACGTGTAAGGCCA
AGGGGCGCCTCCACCTCACCAACATCCGCCTGCTTTTCATCGCCACCAAA
CCAACGGCCAGCCCGGTTCCCGGCGGCCCGGAATTTGCCTCTTTCGACGT
CCCCCTGCGCGGCATCGTGGACGTGAAATTTAACCAACCCATTTTTGGCG
CGAACAATCTGCAAGGCAAAGTGACGCCGGTTTCTTGCCTGGAAGCGTCG
GCCCCTGTGGAATGGAAAGCCGCTTTTATCGCGGGGGGGACCACAGTCCT
CATCCCCACCTTGCTCCGTCTTATGGACCAATTGCACAGGGAGGCGCAAG
GGCAGGCAATACCAGCCCAGCAATTGCGAACGCCCCAACAACAGCCACAT
CACGGACAACCGCCGCAACCGCAACCACATGCACCGCAGCAGCAGCAGCC
CTGGTATGGGGGGGAGGGGACCTTGCCCGTCGCGCAGGCGGTAGCTCCCG
GCGTAGAGGGAGGAGGGTACATGGACCCAAGCGACCCCTCGCGGGTGCTG
GTGGACGCGCCAGTGGCCACAGCGACGTATACGAATCCGATGCCGCACGC
CTCTGCCCCTCCCCCGTCCTCTGGCTCCTCCTTCAACCCGCCAGCCTACA
GCGGGTTCTCCTCAGGGCGGTGAAGGAAGCGGGAAAAATGAGGGGTGCGA
AGAAGGAAGGGGCTTGGGAAGGGCGGGAAAGAGGGATGGACGGAGGAGGA
TGTAGTAAACCTGTGCAGATGCTTGTGGGAAGGAGCAGAAGAGGGCCGAA
ATCTAAATAAAACGAGGACCGTGAACAAGAGCGGGTGAACTCCATCGTGG
GTGTCAAAGAGTTTGCTCACGGCGCCTCTTACTCTCTCCTTCTCGCCCTT
TCTGACACTGCCTCGTTTTTGAAGTCCATCCTCTCCGTCGGTT
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protein sequence of rna7216

>rna7216-protein ID=rna7216-protein|Name=rna7216|organism=Nannochloropsis gaditana|type=polypeptide|length=170bp
GXGADLGGRDRLVLLKPEGGGARGGDEKKKESKGREKSRVDKSQHPFISA
SFADVRSRRARHSRGDPLTAYPAVILALVLVFHFSIPFPTVIDLKEMGFD
GQEPSILKEARETVQREEPELWDSIFREDPIARKYMEAPETVLKDVIDLT
SEFETNLKGKTTLNFGTASV
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mRNA from alignment at CM002471.1:28642..29511-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7216 ID=rna7216|Name=rna7216|organism=Nannochloropsis gaditana|type=mRNA|length=870bp|location=Sequence derived from alignment at CM002471.1:28642..29511- (Nannochloropsis gaditana)
GGGGNGGGGGCGGACCTTGGAGGAAGGGACAGACTGGTCCTACTAAAACC
CGAGGGAGGAGGGGCTAGAGGTGGGGACGAGAAGAAGAAGGAAAGCAAAG
GCCGGGAAAAATCTCGCGTGGACAAATCTCAGCATCCATTCATCTCTGCC
TCTTTCGCCGACGTCCGATCACGTCGGGCGAGGCATTCGAGAGGCGATCC
CCTTACCGCATATCCCGCCGTGATTCTCGCCCTCGTTCTCGTTTTCCATT
TTTCCATTCCCTTCCCCACAGTAATCGATTTGAAGGAAATGGGCTTCGAC
GGTCAGGAGCCCTCCATCCTCAAAGAGGCGCGGGAAACCGTGCAAAGAGA
AGAACCGGAGCTTTGGGACTCGATTTTCCGTGAGGACCCTATTGCCCGAA
AATACATGGAAGCCCCCGAGACGGTCCTCAAGGACGTGATCGATTTGACC
TCAGAATTTGAGACAAATTTAAAGGGAAAGACCACGCTGAATTTTGGGAC
GGCGAGTGTGTGAGGGGAGTGGAGGGAAGATTTCTGGTGCCCTGTTGAAG
AGAGGCGCGGTGTGGAAGGCGCTTGGGACATTGTTGGCTTTCCAAAGAGG
GAAGAATAGGACGCTTGTCGTATATTCTGTACGATGAAAGCCTCGGATCT
TGTTCTAGTGGATTGTATCTATACAGGTGTACATACAAGATTTAGCGTAC
TCGTACGAGACGACTGCTTGTCTTTGAACATCAGAAGGAGAATAAAGCCG
AGGAAAAGCTGGCTTTGCAGGCCATCTTAATTGGACTCACAAAAGCAGGA
CAACGAAAACAACTCTTTGAAATAAAATAGGCAATGGAAATTGTGAAAAT
CGCTTTAAGAACCTCCCCTT
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Coding sequence (CDS) from alignment at CM002471.1:28642..29511-

>rna7216 ID=rna7216|Name=rna7216|organism=Nannochloropsis gaditana|type=CDS|length=513bp|location=Sequence derived from alignment at CM002471.1:28642..29511- (Nannochloropsis gaditana)
GGGGNGGGGGCGGACCTTGGAGGAAGGGACAGACTGGTCCTACTAAAACC
CGAGGGAGGAGGGGCTAGAGGTGGGGACGAGAAGAAGAAGGAAAGCAAAG
GCCGGGAAAAATCTCGCGTGGACAAATCTCAGCATCCATTCATCTCTGCC
TCTTTCGCCGACGTCCGATCACGTCGGGCGAGGCATTCGAGAGGCGATCC
CCTTACCGCATATCCCGCCGTGATTCTCGCCCTCGTTCTCGTTTTCCATT
TTTCCATTCCCTTCCCCACAGTAATCGATTTGAAGGAAATGGGCTTCGAC
GGTCAGGAGCCCTCCATCCTCAAAGAGGCGCGGGAAACCGTGCAAAGAGA
AGAACCGGAGCTTTGGGACTCGATTTTCCGTGAGGACCCTATTGCCCGAA
AATACATGGAAGCCCCCGAGACGGTCCTCAAGGACGTGATCGATTTGACC
TCAGAATTTGAGACAAATTTAAAGGGAAAGACCACGCTGAATTTTGGGAC
GGCGAGTGTGTGA
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Synonyms
Publications