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Properties
| Property Name | Value |
|---|
| Product | 16s rrna methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100247g3.2328.mrna |
| Orig protein id | gnl|cribi|Naga_100247g3.2328 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:261679..263499 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna721 ID=rna721|Name=rna721|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
ATGCATCTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTC
TGAGGCATTCCTTGGCCTCAAAAGCCCCGGTCACTTGCCTTTCCGCCGTC
TTCCTTCACTCGCTGCCACCGTACCCGTGGGTTCCGTCACGGAGCTCCCG
CCAGGCGAGCGAAAGGTTGTGGATACGGAGGCCGGGGCCGTGATTGTCAC
CAATGTGGGAGGAAGCCTCTACGCCGTCCTTGCCAAATGCCCGCACCTGG
GTCTGCCCATGAAAACAGGCGTAATTGCTATCGAAGGTGGGGAGCCCACC
ATCACCTGCAAATTCCACAATTCCAAATTTGCGCTGACGGATGGGAAGTG
CAAGGCCTGGTCTGAGAGTGTCTTTGGCATAAAGGGGACAGAGGGAATCG
CAGGTTTTGTTGGAGGTTTTGGCGGTGCAAAAGGCTCACCTGCCACCGTC
TTTCCGACGTCAATGAGTGAAGAGGGCATTGTGAGCATCGAAATGTGA back to topprotein sequence of rna721 >rna721-protein ID=rna721-protein|Name=rna721|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MVCIRASTVPIKAARHFVLLATTATLSLAACVLNHRPYRSYPAFVSRSAP
PRGLLGSIKHEQNIPDPFTTRCQHFVQFPGHIEGKDSHKDVHIRHKFACR
SHAGSGANQENVNTGGTDLGGLPQAPIVVDAKTKEAWPDLRPAQWKQIEA
LANLLVEINTKINVISRKDIQNVLPNHILPALGLATLLRKAPAGTSVLDI
GTGGGFPGLPLAIACPQLNLLLVDATGKKIRAVAAMSARLNLKNVATLHA
RIEEVQGQRFDYVVGRSVTAIPRFLRWAQPKLKVPRQGGRGREKTGESEE
KGPLEDEFGVPVPGVLYVTGLEPTPSTKMARGGGEGGREGGEGEEDGEEE
EEEELAECVPDHVYPVQALLGPVYEGDKHVFHFSAAALVKGRVFVPEWEG
GRGGRREGNG back to topmRNA from alignment at CM002456.1:261679..263499+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna721 ID=rna721|Name=rna721|organism=Nannochloropsis gaditana|type=mRNA|length=1821bp|location=Sequence derived from alignment at CM002456.1:261679..263499+ (Nannochloropsis gaditana)
ATGGTCTGCATAAGAGCGTCTACCGTTCCAATAAAAGCAGCACGGCATTT
TGTGCTActggccaccaccgccacacTTTCGTTGGCAGCATGCGTTCTTA
ATCATCGTCCATATCGTTCATATCCAGCATTTGTATCGCGCagcgcccct
cctcgcggctTACTAGGCTCTATCAAGCATGAGCAAAACATCCCCGACCC
ATTCACCACCCGATGCCAACATTTCGTGCAATTTCCAGGGCATATCGAGG
GCAAAGATAGTCACAAAGACGTCCACATTAGACATAAGTTTGCTTGCAGG
TCGCATGCCGGGTCAGGCGCGAACCAGGAGAATGTAAATACGGGGGGGAC
AGACTTaggcggcctcccccaggccccAATTGTCGTCGACGCGAAGACCA
AAGAAGCCTGGCCTGACCTGCGACCTGCACAATGGAAGCAGATTGAGGCT
TTGGCCAACCTATTGGTTGAGATCAATACCAAAATCAATGTCATTTCACG
CAAGGATATTCAGGTTCGACCCCATGACCCTATGcctgctttcttttccc
gtttcctttccctttctctcctctaACCTCCTGTTGCAATTAACTGGACT
ATTCTGGCCCCAATGTTTGATGTAGTGTTGGCAATATGGAGCGCAGGTGT
ACGTTTGCTATGccccctttccaccttccctccctccctccctcccgccc
tccttccctcccttcagaATGTCCTCCCAAACCACATCTTGCCCGCCCTG
GGCCTAGCAACCCTCCTTCGCAAAGCTCCCGCAGGGACCAGCGTCCTCGA
CATCGGTACGGGCGGGGGCtttcccggcctcccccttgctATTGCCTGCC
CCCAactcaacctcctcctcgtcgacgCCACCGGGAAAAAAATCCGGGCC
GTTGCCGCCATGTCCGCGCGTTTGAATTTGAAAAACGTGGCGACCCTGCA
CGCCCGGATCGAGGAGGTACAGGGACAACGGTTCGATTACGTGGTGGGGA
GGTCCGTCACCGCCATTCCCCGTTTCTTAAGGTGGGCTCAGCCCAAGCTT
AAGGTGCCAaggcaaggcgggagggggagggaaaagacgggcgaaagcga
ggagaaggggccATTGGAGGATGAATTTGGAGTACCAGTTCCAGGCGTGC
TTTATGTGACGGGTTTGGAGCCGACGCCGTCGACGAAAatggcgagggga
ggaggggagggaggaagggaagggggggagggggaggaagacggggagga
ggaggaggaggaggaactggCAGAATGTGTGCCCGACCACGTGTATCCGG
TGCAAGCATTGCTGGGGCCTGTGTACGAAGGGGACAAGCACGTCTTCCAT
TTCTCCGCGGCAGCCTTGGTCAAGGGCCGGGTTTTCGTCCccgagtggga
gggagggcgggggggaaggcgggaggggaacgggGTGCGGGCAAAGAGGA
TGTATGATGAGAAGGGCGTGTTCAGACcggagcgagagagggagttTAGG
CGGGCCTTGCgcgagctggagggggagagggagggagggagggaggaagg
agaggaggggggaggtccgcgcggtggaggaggaagggaaggagggcggg
gagggaagggaggaagcgtgggGGGTGGcagggaaggtggtggtgagggt
CAATGGTGGAAAGGtgagggaggtcgagggggaggaaggggggcaggaag
ggggggaggaagagggggagggagggggggaggagatcgagggTATGGCG
GTCCGCgagctggcggaggggggaataCGCCCTCCCCTGGTTCGCGAGGC
CACGATACGCGGTTCAAGTag back to topCoding sequence (CDS) from alignment at CM002456.1:261679..263499+ >rna721 ID=rna721|Name=rna721|organism=Nannochloropsis gaditana|type=CDS|length=3699bp|location=Sequence derived from alignment at CM002456.1:261679..263499+ (Nannochloropsis gaditana)
ATGGTCTGCATAAGAGCGTCTACCGTTCCAATAAAAGCAGCACGGCATTT
TGTGCTActggccaccaccgccacacTTTCGTTGGCAGCATGCGTTCTTA
ATCATCGTCCATATCGTTCATATCCAGCATTTGTATCGCGCagcgcccct
cctcgcggctTACTAGGCTCTATCAAGCATGAGCAAAACATCCCCGACCC
ATTCACCACCCGATGCCAACATTTCGTGCAATTTCCAGGGCATATCGAGG
GCAAAGATAGTCACAAAGACGTCCACATTAGACATAAGTTTGCTTGCAGG
TCGCATGCCGGGTCAGGCGCGAACCAGGAGAATGTAAATACGGGGGGGAC
AGACTTaggcggcctcccccaggccccAATTGTCGTCGACGCGAAGACCA
AAGAAGCCTGGCCTGACCTGCGACCTGCACAATGGAAGCAGATTGAGGCT
TTGGCCAACCTATTGGTTGAGATCAATACCAAAATCAATGTCATTTCACG
CAAGGATATTCAGaATGTCCTCCCAAACCACATCTTGCCCGCCCTGGGCC
TAGCAACCCTCCTTCGCAAAGCTCCCGCAGGGACCAGCGTCCTCGACATC
GGTACGGGCGGGGGCtttcccggcctcccccttgctATTGCCTGCCCCCA
actcaacctcctcctcgtcgacgCCACCGGGAAAAAAATCCGGGCCGTTG
CCGCCATGTCCGCGCGTTTGAATTTGAAAAACGTGGCGACCCTGCACGCC
CGGATCGAGGAGGTACAGGGACAACGGTTCGATTACGTGGTGGGGAGGTC
CGTCACCGCCATTCCCCGTTTCTTAAGGTGGGCTCAGCCCAAGCTTAAGG
TGCCAaggcaaggcgggagggggagggaaaagacgggcgaaagcgaggag
aaggggccATTGGAGGATGAATTTGGAGTACCAGTTCCAGGCGTGCTTTA
TGTGACGGGTTTGGAGCCGACGCCGTCGACGAAAatggcgaggggaggag
gggagggaggaagggaagggggggagggggaggaagacggggaggaggag
gaggaggaggaactggCAGAATGTGTGCCCGACCACGTGTATCCGGTGCA
AGCATTGCTGGGGCCTGTGTACGAAGGGGACAAGCACGTCTTCCATTTCT
CCGCGGCAGCCTTGGTCAAGGGCCGGGTTTTCGTCCccgagtgggaggga
gggcgggggggaaggcgggaggggaacgggTagATGGTCTGCATAAGAGC
GTCTACCGTTCCAATAAAAGCAGCACGGCATTTTGTGCTActggccacca
ccgccacacTTTCGTTGGCAGCATGCGTTCTTAATCATCGTCCATATCGT
TCATATCCAGCATTTGTATCGCGCagcgcccctcctcgcggctTACTAGG
CTCTATCAAGCATGAGCAAAACATCCCCGACCCATTCACCACCCGATGCC
AACATTTCGTGCAATTTCCAGGGCATATCGAGGGCAAAGATAGTCACAAA
GACGTCCACATTAGACATAAGTTTGCTTGCAGGTCGCATGCCGGGTCAGG
CGCGAACCAGGAGAATGTAAATACGGGGGGGACAGACTTaggcggcctcc
cccaggccccAATTGTCGTCGACGCGAAGACCAAAGAAGCCTGGCCTGAC
CTGCGACCTGCACAATGGAAGCAGATTGAGGCTTTGGCCAACCTATTGGT
TGAGATCAATACCAAAATCAATGTCATTTCACGCAAGGATATTCAGaATG
TCCTCCCAAACCACATCTTGCCCGCCCTGGGCCTAGCAACCCTCCTTCGC
AAAGCTCCCGCAGGGACCAGCGTCCTCGACATCGGTACGGGCGGGGGCtt
tcccggcctcccccttgctATTGCCTGCCCCCAactcaacctcctcctcg
tcgacgCCACCGGGAAAAAAATCCGGGCCGTTGCCGCCATGTCCGCGCGT
TTGAATTTGAAAAACGTGGCGACCCTGCACGCCCGGATCGAGGAGGTACA
GGGACAACGGTTCGATTACGTGGTGGGGAGGTCCGTCACCGCCATTCCCC
GTTTCTTAAGGTGGGCTCAGCCCAAGCTTAAGGTGCCAaggcaaggcggg
agggggagggaaaagacgggcgaaagcgaggagaaggggccATTGGAGGA
TGAATTTGGAGTACCAGTTCCAGGCGTGCTTTATGTGACGGGTTTGGAGC
CGACGCCGTCGACGAAAatggcgaggggaggaggggagggaggaagggaa
gggggggagggggaggaagacggggaggaggaggaggaggaggaactggC
AGAATGTGTGCCCGACCACGTGTATCCGGTGCAAGCATTGCTGGGGCCTG
TGTACGAAGGGGACAAGCACGTCTTCCATTTCTCCGCGGCAGCCTTGGTC
AAGGGCCGGGTTTTCGTCCccgagtgggagggagggcgggggggaaggcg
ggaggggaacgggTagATGGTCTGCATAAGAGCGTCTACCGTTCCAATAA
AAGCAGCACGGCATTTTGTGCTActggccaccaccgccacacTTTCGTTG
GCAGCATGCGTTCTTAATCATCGTCCATATCGTTCATATCCAGCATTTGT
ATCGCGCagcgcccctcctcgcggctTACTAGGCTCTATCAAGCATGAGC
AAAACATCCCCGACCCATTCACCACCCGATGCCAACATTTCGTGCAATTT
CCAGGGCATATCGAGGGCAAAGATAGTCACAAAGACGTCCACATTAGACA
TAAGTTTGCTTGCAGGTCGCATGCCGGGTCAGGCGCGAACCAGGAGAATG
TAAATACGGGGGGGACAGACTTaggcggcctcccccaggccccAATTGTC
GTCGACGCGAAGACCAAAGAAGCCTGGCCTGACCTGCGACCTGCACAATG
GAAGCAGATTGAGGCTTTGGCCAACCTATTGGTTGAGATCAATACCAAAA
TCAATGTCATTTCACGCAAGGATATTCAGaATGTCCTCCCAAACCACATC
TTGCCCGCCCTGGGCCTAGCAACCCTCCTTCGCAAAGCTCCCGCAGGGAC
CAGCGTCCTCGACATCGGTACGGGCGGGGGCtttcccggcctcccccttg
ctATTGCCTGCCCCCAactcaacctcctcctcgtcgacgCCACCGGGAAA
AAAATCCGGGCCGTTGCCGCCATGTCCGCGCGTTTGAATTTGAAAAACGT
GGCGACCCTGCACGCCCGGATCGAGGAGGTACAGGGACAACGGTTCGATT
ACGTGGTGGGGAGGTCCGTCACCGCCATTCCCCGTTTCTTAAGGTGGGCT
CAGCCCAAGCTTAAGGTGCCAaggcaaggcgggagggggagggaaaagac
gggcgaaagcgaggagaaggggccATTGGAGGATGAATTTGGAGTACCAG
TTCCAGGCGTGCTTTATGTGACGGGTTTGGAGCCGACGCCGTCGACGAAA
atggcgaggggaggaggggagggaggaagggaagggggggagggggagga
agacggggaggaggaggaggaggaggaactggCAGAATGTGTGCCCGACC
ACGTGTATCCGGTGCAAGCATTGCTGGGGCCTGTGTACGAAGGGGACAAG
CACGTCTTCCATTTCTCCGCGGCAGCCTTGGTCAAGGGCCGGGTTTTCGT
CCccgagtgggagggagggcgggggggaaggcgggaggggaacgggTag back to top
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