rna7201, rna7201 (mRNA) Nannochloropsis gaditana

Overview
Namerna7201
Unique Namerna7201
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length980
Alignment locationCM002470.1:696623..698256 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100198g8.5732.mrna
Orig protein idgnl|cribi|Naga_100198g8.5732
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:696623..698256 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100198g8gene6964Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7201rna7201-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23490.1cds7184Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7201 ID=rna7201|Name=rna7201|organism=Nannochloropsis gaditana|type=mRNA|length=980bp
GGCCAAAAAGCCAAAAACCGCTACGTTGGATCTCGTCCTCTTTTCATGAT
CCTCCTTCCCCAAAATGTATACCGTAGAAAGTAAAAAGATCAGATGCTTC
ATTTTTTTAGCTTGTTCGTCATTTTGGCCTTGACTGTGCCCCAGGGATTG
GCACAAACGTTGGCCAATAATGGGAGTATGACCCTGCTCCGTGACCTCAA
GGTGAACAAGAGGCGCGTTCGCTGCGGCCGAAACCTGGCTGTTATTGGTA
GGGTCCGTCTCAACAGTTTCGGAGATGCTGACTCTCTGTACTGCGCGCTC
CGCAACATGAATTACGATTCTGCTCAATTTGATTTGAAGGATCGGGTCAC
GCGCTTCACTCATATCAATACCCGCAAGTTCGTCATGATGTTTGGAGACG
AAACTCCATCGGATGGGACTAAAAAATACTGGTGGAGTTGGAGCCGAGAT
GGACGCTTGTTTAGCGAGGGCCTTAAATACAGTCTTCGTGTAAATCTCAT
TCTTAGGAATGCGACTGCAACTCCCGTTACGTGGCGGTTTTATTGTGAGA
CTAAGAAAAACAATTTCACAAGCCACTACTTTTGGGACAAGACAGGCGCC
GATGTGAATAAACAGGTTAGAGTTGCCGCACCCTGCGAGTACACCAGCAA
GAAGGACAAGTTGTAGAATGCAGCAGATATGATATAAAGTTGCAGTATGC
GGAAGGAAAAGAGTAGCCACCATTCGCCCCAAAATAAAAAAAACAGAAGA
CGCCAGAGGGAAGGGTAAATGGAAATTGAAGCTTTAGAAGGGAAAATGCA
TGCTATAGAGAATTGCAGCATATCGATCAAAAAGGAAGAGGAATACATCT
TATTATTCCTACCGGTGCACCGACAGACCTGCTTCGCATTAATAGTCATT
TTGGCATACTGGCACTCCCCAGAGAGCGGTCTCACGTGCTGCACCTATTT
GAACGACTTCATACTTCATCCATCTTTTCC
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protein sequence of rna7201

>rna7201-protein ID=rna7201-protein|Name=rna7201|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTA
TANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKW
FIKEKRSAGRIIWEFDPRGYALTEGRIYTYRMRNKVARDTIPDSVTWAFF
CETKLTGQPNYYSFQESITVPLVMRRK
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mRNA from alignment at CM002470.1:696623..698256-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7201 ID=rna7201|Name=rna7201|organism=Nannochloropsis gaditana|type=mRNA|length=1634bp|location=Sequence derived from alignment at CM002470.1:696623..698256- (Nannochloropsis gaditana)
CATTTTACACCACACAGCTGGTGTCTCTCCTATCCTCTTTTTACTATGCA
CCGTCTTTTGCAGCCAATTTTCACGCTCTAATCCCTCCTATGGAAACAGG
GCATCCATTCTTCCTCCCTTGACTCTTTTTTTGGGGGTCAGCGAGATCGC
ACTTAGAATGATGAGTCTACGACTGGTTTTATTTCTGGGAGCATGCGTCT
TGCTCTCAGTGACAGCGGTAAGTAATACCTCCGACTTTGCCCTTCGCTTT
TCGCATGTATCCTTATCTTCGCGGTTTTAAAATGGTTTCTACTTAGTTGG
AAATAAAGATCAAATGTCTCCATCATGAGATCTCACTACTTTGTATGCTT
GTGCATCACTCACATCTTTCCAGCAAAATCAGACTAAACCAGACATCGAG
TTCGTTGGTTTCAAGGTCAACAGAGAGCAACAAATAAAGGGCAGAAACAT
CATGCTCACTGCCACTGCGAATATGAAATTGATGGGGATCAATGATCTTA
TCTACTGCGGAGTAAGTGACAACTTTGACTGCGAGTGTATAGTGCAACTT
GAGTTTGAATAGCTACCCTTCATAATCTGTATCTGACCAACTTAAGATGT
CAATTTATTCCTTCTACGCTTGACAGTTTAAAAACTTGAATACAACGGGC
TCACCGCCTGTTGAGACGGCCCTTGCCGCGGCAGGGATTCGATTCTCCCA
ACAGCGCACGATGGCAAAAGCGAAATGGTTCATTAAAGAGAAACGGTCCG
CTGGCCGAATTATCTGGTAAGGGAGGGATGACTTCAGCGAACGGTCTTAG
CGATCCCTCTCAGAGCACGAATTCCCCTGCGTGCAAATTTTGCGCAGATT
TTTTGTCCTGAAGCAACTTTAGATACATTTTCTCATTTTATTTATCGTAC
AGGGAGTTTGATCCTCGTGGATATGCTTTGACTGAAGGAAGAATCTACAC
TTATCGCATGAGAAACAAAGTGGCCAGGGACACGATTCCTGATTCTGTCA
CATGGGCATTTTTCTGCGAGACAAAGCTCACAGGACAGCCCAATTATTAC
TCCTTCCAGGAATCTATCACGGTAATCATTTTTACACCTCTTGAAAGCTT
GATTTTTAATAACACGAACTCAAAGATATCTCTCATCTACAATCGAGTAC
AGGTCCCTCTTGTCATGAGGAGAAAGTAAGTCTATTTCAGCATTCTTGCG
GTCAAATATCACGACAGATCAGAAGTAGTTACATTTTACTAATACGTCGA
AGGCAACGGATTCTACTAGATATCAATTTGGCAAGGATAGATAGAGATTT
TTAGGGAATTTAACAGGCATATACAATGTTGGATGGGAATGAGCGATACA
AAGGGGGGGAAAGCAAAAAAGAGCAGTGCTCATTATTCTGACCGACTTGT
TGCTTGTGATTTTTTAAAAATGTGGGGCTAGAGAAGGAGGCTCTCGTTTC
TTTCGTTTAAATCTTGAGTAGACTTTATTTCAATGGATCACTTGACAGCT
CGTGTGGATTCAGTCGAAAGAATAAGTGAATAGTTTAACATGTATTCACA
GGTAAAACTTAATTTTTTGAACGGCAGCTTCTGTACTCTTTTATCCTTTT
GCGTACCAGTAAGGGGAATGCCATTGCCGTAAGT
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Coding sequence (CDS) from alignment at CM002470.1:696623..698256-

>rna7201 ID=rna7201|Name=rna7201|organism=Nannochloropsis gaditana|type=CDS|length=2670bp|location=Sequence derived from alignment at CM002470.1:696623..698256- (Nannochloropsis gaditana)
GTCCCTCTTGTCATGAGGAGAAAGTAAGGAGTTTGATCCTCGTGGATATG
CTTTGACTGAAGGAAGAATCTACACTTATCGCATGAGAAACAAAGTGGCC
AGGGACACGATTCCTGATTCTGTCACATGGGCATTTTTCTGCGAGACAAA
GCTCACAGGACAGCCCAATTATTACTCCTTCCAGGAATCTATCACGTTTA
AAAACTTGAATACAACGGGCTCACCGCCTGTTGAGACGGCCCTTGCCGCG
GCAGGGATTCGATTCTCCCAACAGCGCACGATGGCAAAAGCGAAATGGTT
CATTAAAGAGAAACGGTCCGCTGGCCGAATTATCTGCAAAATCAGACTAA
ACCAGACATCGAGTTCGTTGGTTTCAAGGTCAACAGAGAGCAACAAATAA
AGGGCAGAAACATCATGCTCACTGCCACTGCGAATATGAAATTGATGGGG
ATCAATGATCTTATCTACTGCGGAATGATGAGTCTACGACTGGTTTTATT
TCTGGGAGCATGCGTCTTGCTCTCAGTGACAGCGGTCCCTCTTGTCATGA
GGAGAAAGTAAGGAGTTTGATCCTCGTGGATATGCTTTGACTGAAGGAAG
AATCTACACTTATCGCATGAGAAACAAAGTGGCCAGGGACACGATTCCTG
ATTCTGTCACATGGGCATTTTTCTGCGAGACAAAGCTCACAGGACAGCCC
AATTATTACTCCTTCCAGGAATCTATCACGTTTAAAAACTTGAATACAAC
GGGCTCACCGCCTGTTGAGACGGCCCTTGCCGCGGCAGGGATTCGATTCT
CCCAACAGCGCACGATGGCAAAAGCGAAATGGTTCATTAAAGAGAAACGG
TCCGCTGGCCGAATTATCTGCAAAATCAGACTAAACCAGACATCGAGTTC
GTTGGTTTCAAGGTCAACAGAGAGCAACAAATAAAGGGCAGAAACATCAT
GCTCACTGCCACTGCGAATATGAAATTGATGGGGATCAATGATCTTATCT
ACTGCGGAATGATGAGTCTACGACTGGTTTTATTTCTGGGAGCATGCGTC
TTGCTCTCAGTGACAGCGGTCCCTCTTGTCATGAGGAGAAAGTAAGGAGT
TTGATCCTCGTGGATATGCTTTGACTGAAGGAAGAATCTACACTTATCGC
ATGAGAAACAAAGTGGCCAGGGACACGATTCCTGATTCTGTCACATGGGC
ATTTTTCTGCGAGACAAAGCTCACAGGACAGCCCAATTATTACTCCTTCC
AGGAATCTATCACGTTTAAAAACTTGAATACAACGGGCTCACCGCCTGTT
GAGACGGCCCTTGCCGCGGCAGGGATTCGATTCTCCCAACAGCGCACGAT
GGCAAAAGCGAAATGGTTCATTAAAGAGAAACGGTCCGCTGGCCGAATTA
TCTGCAAAATCAGACTAAACCAGACATCGAGTTCGTTGGTTTCAAGGTCA
ACAGAGAGCAACAAATAAAGGGCAGAAACATCATGCTCACTGCCACTGCG
AATATGAAATTGATGGGGATCAATGATCTTATCTACTGCGGAATGATGAG
TCTACGACTGGTTTTATTTCTGGGAGCATGCGTCTTGCTCTCAGTGACAG
CGGTCCCTCTTGTCATGAGGAGAAAGTAAGGAGTTTGATCCTCGTGGATA
TGCTTTGACTGAAGGAAGAATCTACACTTATCGCATGAGAAACAAAGTGG
CCAGGGACACGATTCCTGATTCTGTCACATGGGCATTTTTCTGCGAGACA
AAGCTCACAGGACAGCCCAATTATTACTCCTTCCAGGAATCTATCACGTT
TAAAAACTTGAATACAACGGGCTCACCGCCTGTTGAGACGGCCCTTGCCG
CGGCAGGGATTCGATTCTCCCAACAGCGCACGATGGCAAAAGCGAAATGG
TTCATTAAAGAGAAACGGTCCGCTGGCCGAATTATCTGCAAAATCAGACT
AAACCAGACATCGAGTTCGTTGGTTTCAAGGTCAACAGAGAGCAACAAAT
AAAGGGCAGAAACATCATGCTCACTGCCACTGCGAATATGAAATTGATGG
GGATCAATGATCTTATCTACTGCGGAATGATGAGTCTACGACTGGTTTTA
TTTCTGGGAGCATGCGTCTTGCTCTCAGTGACAGCGGTCCCTCTTGTCAT
GAGGAGAAAGTAAGGAGTTTGATCCTCGTGGATATGCTTTGACTGAAGGA
AGAATCTACACTTATCGCATGAGAAACAAAGTGGCCAGGGACACGATTCC
TGATTCTGTCACATGGGCATTTTTCTGCGAGACAAAGCTCACAGGACAGC
CCAATTATTACTCCTTCCAGGAATCTATCACGTTTAAAAACTTGAATACA
ACGGGCTCACCGCCTGTTGAGACGGCCCTTGCCGCGGCAGGGATTCGATT
CTCCCAACAGCGCACGATGGCAAAAGCGAAATGGTTCATTAAAGAGAAAC
GGTCCGCTGGCCGAATTATCTGCAAAATCAGACTAAACCAGACATCGAGT
TCGTTGGTTTCAAGGTCAACAGAGAGCAACAAATAAAGGGCAGAAACATC
ATGCTCACTGCCACTGCGAATATGAAATTGATGGGGATCAATGATCTTAT
CTACTGCGGAATGATGAGTCTACGACTGGTTTTATTTCTGGGAGCATGCG
TCTTGCTCTCAGTGACAGCG
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Synonyms
Publications