EWM23490.1, cds7184 (CDS) Nannochloropsis gaditana

Overview
NameEWM23490.1
Unique Namecds7184
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:698040..698099 -
Alignment locationCM002470.1:697746..697883 -
Alignment locationCM002470.1:697491..697630 -
Alignment locationCM002470.1:697186..697354 -
Alignment locationCM002470.1:697078..697104 -

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Properties
Property NameValue
Protein idEWM23490.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100198g8.5732.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:698040..698099 -
CM002470.1supercontigCM002470.1:697746..697883 -
CM002470.1supercontigCM002470.1:697491..697630 -
CM002470.1supercontigCM002470.1:697186..697354 -
CM002470.1supercontigCM002470.1:697078..697104 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23490.1 vs. NCBI_GenBank
Match: gi|585104560|gb|EWM23490.1| (hypothetical protein Naga_100198g8 [Nannochloropsis gaditana])

HSP 1 Score: 369.777 bits (948), Expect = 1.135e-129
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRIIWEFDPRGYALTEGRIYTYRMRNKVARDTIPDSVTWAFFCETKLTGQPNYYSFQESITVPLVMRRK 177
            MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRIIWEFDPRGYALTEGRIYTYRMRNKVARDTIPDSVTWAFFCETKLTGQPNYYSFQESITVPLVMRRK
Sbjct:    1 MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRIIWEFDPRGYALTEGRIYTYRMRNKVARDTIPDSVTWAFFCETKLTGQPNYYSFQESITVPLVMRRK 177
[Close]
BLAST of EWM23490.1 vs. NCBI_GenBank
Match: gi|553185352|ref|XP_005854239.1| (hypothetical protein NGA_0024220, partial [Nannochloropsis gaditana CCMP526] >gi|422294819|gb|EKU22119.1| hypothetical protein NGA_0024220, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 230.335 bits (586), Expect = 2.229e-75
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0 
Query:    1 MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRIIWE 114
            MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRII +
Sbjct:    1 MMSLRLVLFLGACVLLSVTAQNQTKPDIEFVGFKVNREQQIKGRNIMLTATANMKLMGINDLIYCGFKNLNTTGSPPVETALAAAGIRFSQQRTMAKAKWFIKEKRSAGRIICK 114
The following BLAST results are available for this feature:
BLAST of EWM23490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104560|gb|EWM23490.1|1.135e-129100.00hypothetical protein Naga_100198g8 [Nannochloropsi... [more]
gi|553185352|ref|XP_005854239.1|2.229e-7598.25hypothetical protein NGA_0024220, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7201rna7201Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications