rna7200, rna7200 (mRNA) Nannochloropsis gaditana

Overview
Namerna7200
Unique Namerna7200
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1715
Alignment locationCM002470.1:694882..696302 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100198g7.5734.mrna
Orig protein idgnl|cribi|Naga_100198g7.5734
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:694882..696302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100198g7gene6963Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7200rna7200-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23492.1cds7183Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7200 ID=rna7200|Name=rna7200|organism=Nannochloropsis gaditana|type=mRNA|length=1715bp
GTCACGGTTACTAGCGCTTGACGTGGCTTGCTTCCAGGCAGGTATTTCAT
CACATGCACCCTCAGCTATCTCTTCATTCCCCGATTTTCCTTCCGTCCAC
AGCTGCACGAACAGACACAAACAAATGGCAGATAGCTCTGGAAGTGGTAC
AGGACAACCTGCGGTCCCACCGTCGCGAAAGCGTCCCTCTGTCCGGTACG
TCAGAGCTCAGCATGAATGAGATGGTAACAACGATGTGTTCTGGTGATAA
CTCCGTCGTACTCTGTACTCATTCGCACAAAACTTTCTACATCTTTTGAC
ATACAATCATTTCTCGCACAATGCTGTATCTCATGTCCTTCCATATCTAG
CAAAGGCAAGGACAAGGGAGAGTCTGGCGGTGCTTCGATCGGAACCGCGA
CATCGGGCAAACGTCGCTTGCTGGACACGACGCGCCAGGGGGTGCGCGTG
TGGCTGGTGAAGGTCCCGGTGGCGGTAGCGGAGGCCATTAAGAGCGCTCA
AGAAGGCGAAAAGGTCGGCACTCTGACTGTGAGCCGAAGCCATGGCGGTG
GAGGGGCAGGAGCAGACGATCTGCGCACGGAAGCCGTACGCCTGGAGGAA
AGCTTATGCGAGCGCCTGGAACTGCCCCGCGACTTTACCCTGGAAGCCCC
CCCCGCAGAGACGAAGATGCCCAAGATGTACGCCCTGCGCGCCGCCGCGG
AGGGAGGAGGGCCTGAAGGGGGGCGCATGATGGTGGAGGGGGTGGTGAGT
CGGCGGACGAGCCTCTTGCCCACAGCTTCCTTGGACTACCGCGTCTTTGC
CAAGAAGAGGCAAATCCAGCACCACCGGAAAGAGCGGCGTGTGGAGCTTT
TGCGGGATGACTGGGGCCCAGGAGGCGAGGGAGGGCGGGGGGCTGGCGGG
GCTGTGCGGAAGATGATCGATCTCAACGCGCCCCTGAGCGGAGCAGGGGT
GGGGAGGGGGACAGGAGGGAGAGACGGGCCCCAGAGGGTGCGGCTCGATC
AGGCGGGCTTGCGGACGGCGCTTTTCAAATGCTTTCAATTGAAATCGGCC
TGGACTGCGCGGGAGTTGGTGGCTCGACTGGGGCAGCCCGAGGGGAGCGT
CAAGAGTGCGCTGAGGGAGATCTCTGACTACCAGACTCAGGGAGACTATT
TCGGGAAATACTTGCTCAAAACAGAATTCAGGGGAAAAGATGGATGAAGT
ATGAAGTCGTTCAAATAGGTGCAGCACGTGAGACCGCTCTCTGGGGAGTG
CCAGTATGCCAAAATGACTATTAATGCGAAGCAGGTCTGTCGGTGCACCG
GTAGGAATAATAAGATGTATTCCTCTTCCTTTTTGATCGATATGCTGCAA
TTCTCTATAGCATGCATTTTCCCTTCTAAAGCTTCAATTTCCATTTACCC
TTCCCTCTGGCGTCTTCTGTTTTTTTTATTTTGGGGCGAATGGTGGCTAC
TCTTTTCCTTCCGCATACTGCAACTTTATATCATATCTGCTGCATTCTAC
AACTTGTCCTTCTTGCTGGTGTACTCGCAGGGTGCGGCAACTCTAACCTG
TCACGTCGCCAATGTCGAGATGAGAGGTTTTATGTAAATAGTTGAACATG
AAGAGGGACAGTACCACAAAAATGAAGTGTATAGGTGTGACCATCTCGTT
TCAAAGAAAACAGACGACAAGCTGCTGTGGTATGTAAGGGAAACTTTTGC
CGTCCTCGCCATTTG
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protein sequence of rna7200

>rna7200-protein ID=rna7200-protein|Name=rna7200|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MLHFFSLFVILALTVPQGLAQTLANNGSMTLLRDLKVNKRRVRCGRNLAV
IGRVRLNSFGDADSLYCALRNMNYDSAQFDLKDRVTRFTHINTRKFVMMF
GDETPSDGTKKYWWSWSRDGRLFSEGLKYSLRVNLILRNATATPVTWRFY
CETKKNNFTSHYFWDKTGADVNKQVRVAAPCEYTSKKDKL
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mRNA from alignment at CM002470.1:694882..696302-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7200 ID=rna7200|Name=rna7200|organism=Nannochloropsis gaditana|type=mRNA|length=1421bp|location=Sequence derived from alignment at CM002470.1:694882..696302- (Nannochloropsis gaditana)
GGCCAAAAAGCCAAAAACCGCTACGTTGGATCTCGTCCTCTTTTCATGAT
CCTCCTTCCCCAAAATGTATACCGTAGAAAGTAAAAAGATCAGATGCTTC
ATTTTTTTAGCTTGTTCGTCATTTTGGCCTTGACTGTGCCCCAGGTAAGT
GTCTAGATGATAAGTCTGACAAGGTTGCCTTTGATAGATCGTCTCACAGA
GCAGCACCACATCCTTCCTGTCATTCACGGGGCTCTGTTGTTTACAAATT
GCACACCAAACTCAGGGATTGGCACAAACGTTGGCCAATAATGGGAGTAT
GACCCTGCTCCGTGACCTCAAGGTGAACAAGAGGCGCGTTCGCTGCGGCC
GAAACCTGGCTGTTATTGGTAGGGTCCGTCTCAACAGTTTCGGAGATGCT
GACTCTCTGTACTGCGCGGTAAGTGGATATATACATATAAAAGTCGATGT
AAATCTGATAATATAATTAATGGCGCTTTATACTTTTTTTCGGCGTAATA
TCGTGTGCACATCCGGCGAAACACCGGGCGAAAACATTCGTCGTTCAGCT
CCGCAACATGAATTACGATTCTGCTCAATTTGATTTGAAGGATCGGGTCA
CGCGCTTCACTCATATCAATACCCGCAAGTTCGTCATGATGTTTGGAGAC
GAAACTCCATCGGATGGGACTAAAAAATACTGGTGGAGTTGGAGCCGAGA
TGGACGCTTGTTTAGCGAGGGCCTTAAATACAGTCTTCGTGTAAATCTCA
TTCTTAGGAATGCGACTGCAACTCCCGTTACGTGGCGGTTTTATTGTGAG
ACTAAGAAAAACAATTTCACAAGCCACTACTTTTGGGACAAGACAGGCGC
CGATGTGAATAAACAGGTGGGTGCCCACTCCATTCATACAAATGGCGAGG
ACGGCAAAAGTTTCCCTTACATACCACAGCAGCTTGTCGTCTGTTTTCTT
TGAAACGAGATGGTCACACCTATACACTTCATTTTTGTGGTACTGTCCCT
CTTCATGTTCAACTATTTACATAAAACCTCTCATCTCGACATTGGCGACG
TGACAGGTTAGAGTTGCCGCACCCTGCGAGTACACCAGCAAGAAGGACAA
GTTGTAGAATGCAGCAGATATGATATAAAGTTGCAGTATGCGGAAGGAAA
AGAGTAGCCACCATTCGCCCCAAAATAAAAAAAACAGAAGACGCCAGAGG
GAAGGGTAAATGGAAATTGAAGCTTTAGAAGGGAAAATGCATGCTATAGA
GAATTGCAGCATATCGATCAAAAAGGAAGAGGAATACATCTTATTATTCC
TACCGGTGCACCGACAGACCTGCTTCGCATTAATAGTCATTTTGGCATAC
TGGCACTCCCCAGAGAGCGGTCTCACGTGCTGCACCTATTTGAACGACTT
CATACTTCATCCATCTTTTCC
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Coding sequence (CDS) from alignment at CM002470.1:694882..696302-

>rna7200 ID=rna7200|Name=rna7200|organism=Nannochloropsis gaditana|type=CDS|length=2292bp|location=Sequence derived from alignment at CM002470.1:694882..696302- (Nannochloropsis gaditana)
GTTAGAGTTGCCGCACCCTGCGAGTACACCAGCAAGAAGGACAAGTTGTA
GCTCCGCAACATGAATTACGATTCTGCTCAATTTGATTTGAAGGATCGGG
TCACGCGCTTCACTCATATCAATACCCGCAAGTTCGTCATGATGTTTGGA
GACGAAACTCCATCGGATGGGACTAAAAAATACTGGTGGAGTTGGAGCCG
AGATGGACGCTTGTTTAGCGAGGGCCTTAAATACAGTCTTCGTGTAAATC
TCATTCTTAGGAATGCGACTGCAACTCCCGTTACGTGGCGGTTTTATTGT
GAGACTAAGAAAAACAATTTCACAAGCCACTACTTTTGGGACAAGACAGG
CGCCGATGTGAATAAACAGGGATTGGCACAAACGTTGGCCAATAATGGGA
GTATGACCCTGCTCCGTGACCTCAAGGTGAACAAGAGGCGCGTTCGCTGC
GGCCGAAACCTGGCTGTTATTGGTAGGGTCCGTCTCAACAGTTTCGGAGA
TGCTGACTCTCTGTACTGCGCGATGCTTCATTTTTTTAGCTTGTTCGTCA
TTTTGGCCTTGACTGTGCCCCAGGTTAGAGTTGCCGCACCCTGCGAGTAC
ACCAGCAAGAAGGACAAGTTGTAGCTCCGCAACATGAATTACGATTCTGC
TCAATTTGATTTGAAGGATCGGGTCACGCGCTTCACTCATATCAATACCC
GCAAGTTCGTCATGATGTTTGGAGACGAAACTCCATCGGATGGGACTAAA
AAATACTGGTGGAGTTGGAGCCGAGATGGACGCTTGTTTAGCGAGGGCCT
TAAATACAGTCTTCGTGTAAATCTCATTCTTAGGAATGCGACTGCAACTC
CCGTTACGTGGCGGTTTTATTGTGAGACTAAGAAAAACAATTTCACAAGC
CACTACTTTTGGGACAAGACAGGCGCCGATGTGAATAAACAGGGATTGGC
ACAAACGTTGGCCAATAATGGGAGTATGACCCTGCTCCGTGACCTCAAGG
TGAACAAGAGGCGCGTTCGCTGCGGCCGAAACCTGGCTGTTATTGGTAGG
GTCCGTCTCAACAGTTTCGGAGATGCTGACTCTCTGTACTGCGCGATGCT
TCATTTTTTTAGCTTGTTCGTCATTTTGGCCTTGACTGTGCCCCAGGTTA
GAGTTGCCGCACCCTGCGAGTACACCAGCAAGAAGGACAAGTTGTAGCTC
CGCAACATGAATTACGATTCTGCTCAATTTGATTTGAAGGATCGGGTCAC
GCGCTTCACTCATATCAATACCCGCAAGTTCGTCATGATGTTTGGAGACG
AAACTCCATCGGATGGGACTAAAAAATACTGGTGGAGTTGGAGCCGAGAT
GGACGCTTGTTTAGCGAGGGCCTTAAATACAGTCTTCGTGTAAATCTCAT
TCTTAGGAATGCGACTGCAACTCCCGTTACGTGGCGGTTTTATTGTGAGA
CTAAGAAAAACAATTTCACAAGCCACTACTTTTGGGACAAGACAGGCGCC
GATGTGAATAAACAGGGATTGGCACAAACGTTGGCCAATAATGGGAGTAT
GACCCTGCTCCGTGACCTCAAGGTGAACAAGAGGCGCGTTCGCTGCGGCC
GAAACCTGGCTGTTATTGGTAGGGTCCGTCTCAACAGTTTCGGAGATGCT
GACTCTCTGTACTGCGCGATGCTTCATTTTTTTAGCTTGTTCGTCATTTT
GGCCTTGACTGTGCCCCAGGTTAGAGTTGCCGCACCCTGCGAGTACACCA
GCAAGAAGGACAAGTTGTAGCTCCGCAACATGAATTACGATTCTGCTCAA
TTTGATTTGAAGGATCGGGTCACGCGCTTCACTCATATCAATACCCGCAA
GTTCGTCATGATGTTTGGAGACGAAACTCCATCGGATGGGACTAAAAAAT
ACTGGTGGAGTTGGAGCCGAGATGGACGCTTGTTTAGCGAGGGCCTTAAA
TACAGTCTTCGTGTAAATCTCATTCTTAGGAATGCGACTGCAACTCCCGT
TACGTGGCGGTTTTATTGTGAGACTAAGAAAAACAATTTCACAAGCCACT
ACTTTTGGGACAAGACAGGCGCCGATGTGAATAAACAGGGATTGGCACAA
ACGTTGGCCAATAATGGGAGTATGACCCTGCTCCGTGACCTCAAGGTGAA
CAAGAGGCGCGTTCGCTGCGGCCGAAACCTGGCTGTTATTGGTAGGGTCC
GTCTCAACAGTTTCGGAGATGCTGACTCTCTGTACTGCGCGATGCTTCAT
TTTTTTAGCTTGTTCGTCATTTTGGCCTTGACTGTGCCCCAG
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Synonyms
Publications