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Properties
| Property Name | Value |
|---|
| Product | rieske (2fe-2s) domain protein |
| Orig transcript id | gnl|cribi|Naga_100247g2.2336.mrna |
| Orig protein id | gnl|cribi|Naga_100247g2.2336 |
| Gene | fdc |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:260166..261081 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna720 ID=rna720|Name=rna720|organism=Nannochloropsis gaditana|type=mRNA|length=1161bp
ATGGGCCCACCGACCCCCGAATCCGTTGCCCTTTTGAAAGACCGTTTCCC
CAACCGTTACATGGTCTGGAATCTGTCCAACGAAGCTTCGCACCGGATCG
CACCGGCACTCCAGGGGCAGCTCTGCGACTTCCATTGGTCCGCCCCGGGA
AAATCCCAAAATCCGGCCCTGCACAGCCTCTTCGGCCTTTGTTACGCCAT
CCATGCCTGGCTCTCCCTGGCACCCACCCACGCCGCCTTCGTCTTTTGCG
GGAACGGGAAGACGCGGACGGGCATCGTGGTGGCTTGCCTCCTCCGCTAT
TGCGCGCAGGTGCCAACCGCCTTGGAAGGCTTCAAGCTGTTCTGCCACAA
GCGTTGCAAGGCCCTCTTTGAAGACGTGAAGAGCAAGATCCCGCCCACCA
TGGTCAACTTCTTCTCCCACTTTGACGAGGCCTACGACCTGGGCGAGTTC
CCGAACCGGCATCCTTTGCGCCTGCTCAGCGTGCGCATAGATGGCGTCCC
CGTGGAGGACTTGCCATGCATCGACGTCTGGAACGCGGACAGTGTCAAGG
TGTATTCCTCCCTGACCGCCCCCGCCGCGAGCAAGTCCTGGGAGGAGGAG
ACGGGTCTCTATCGGGAGGTGGAGGCCCGTCTCTTGGGGGACTTCGTCCT
GATCGGCCGTTTCGGCGGCAAGTACGGCCACGACGAGCACGATGCGAGCA
AGATCCTCTTCCGCTACGTGGGGCACACGGCGTTTTTGACGGAAGGCGTG
GTGGAGCTTCGGAAGGATGCCTTTGATATCATGCAACGGTACAAGCAGAA
TTTTGAGGAGGACAGCTTCGCGATGGAATTGGAGTTTGAACGCTTGGGGC
CTGGGCTCTCAGCCGGGCTGGATGACTCCGCGACGACCCTCCGGTTGTGG
GAGGCGCTCCCGGAGAAGGTCACGGGATGGACGCCGACAGGCTGCAAAGC
CTCCTTTCCCGGGCACAACCCTCCTCCTCCGCCAGCGCGGGGGGAGGAGA
GGAGGGAGCAGGAGGGGAGGACCTATCGGCCGAGACGGTGTTGAACAAGA
TGATTCTAGCCAGAGCAGGGGGCGGTACTGGGCGCGGTGCGGTGGGAGGA
AAGGAAGAAGGGGAGCCTTCAGCCAAGGAGGCTTTGAACAGGATGTTGTT
GGCGAGGGCGG back to topprotein sequence of rna720 >rna720-protein ID=rna720-protein|Name=rna720|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MHLASTLLAIIAALTLSEAFLGLKSPGHLPFRRLPSLAATVPVGSVTELP
PGERKVVDTEAGAVIVTNVGGSLYAVLAKCPHLGLPMKTGVIAIEGGEPT
ITCKFHNSKFALTDGKCKAWSESVFGIKGTEGIAGFVGGFGGAKGSPATV
FPTSMSEEGIVSIEM back to topmRNA from alignment at CM002456.1:260166..261081+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna720 ID=rna720|Name=rna720|organism=Nannochloropsis gaditana|type=mRNA|length=916bp|location=Sequence derived from alignment at CM002456.1:260166..261081+ (Nannochloropsis gaditana)
ATGCATCTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTC
TGAGGTACGTGCTATAGCTAATACCAACCCAAAGATTTTACAGAGCTGAT
GGGATGCAAATTCCCAGCATGCAACTTTGACGTCTTTCTTTCCCCACTGC
CACCTCATTCGCGGCTTTCCCGTTGAGAAGGCATTCCTTGGCCTCAAAAG
CCCCGGTCACTTGCCTTTCCGCCGTCTTCCTTCACTCGCTGCCACCGTAC
CCGTGGGTTCCGTCACGGAGCTCCCGCCAGGTATGAGAGTCTTTCCCTGT
GCTCCCAGTCCACTACAGTCCTTGTCAACATGCACCTCGCCTTTCCATAC
TAAACGACCTCTTCCCTGCCATGTGGTGCTGGCAGGCGAGCGAAAGGTTG
TGGATacggaggccggggccgtgATTGTCACCAatgtgggaggaagcctc
TACGCCGTCCTTGCCAAATGCCCGCACCTGGGTCTGCCCATGAAAACAGG
TATGATTGTTGGTTCTCACTCGAAGGAAGTAGGTGCGTGGACTTGTTAAT
GCCTGGTCCATGGACAGagtgatggaagaggaccaTACTTGCCTTCGTAT
ACTATATCGAATTGTCAACTTCACGCTCGCCCTCTGCCTTGCTCTTGTTG
ATACATTTGTTCCCTCCTACCGTCTTGACTCTCTAGGCGTAATTGCTATC
GAAGGTGGGGAGCCCACCATCACCTGCAAATTCCACAATTCCAAATTTGC
GCTGACGGATGGGAAGTGCAAGGCCTGGTCTGAGAGTGTCTTTGGCATAa
aggggacagagggaaTCGCAGGTTTTGTTGGAGGTTTTGGCGGTGCAAAA
GGCTCACCTGCCACCGTCTTTCCGACGTCAATGAGTGAAGAGGGCATTGT
GAGCATCGAAATGTGA back to topCoding sequence (CDS) from alignment at CM002456.1:260166..261081+ >rna720 ID=rna720|Name=rna720|organism=Nannochloropsis gaditana|type=CDS|length=1992bp|location=Sequence derived from alignment at CM002456.1:260166..261081+ (Nannochloropsis gaditana)
ATGCATCTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTC
TGAGGCATTCCTTGGCCTCAAAAGCCCCGGTCACTTGCCTTTCCGCCGTC
TTCCTTCACTCGCTGCCACCGTACCCGTGGGTTCCGTCACGGAGCTCCCG
CCAGGCGAGCGAAAGGTTGTGGATacggaggccggggccgtgATTGTCAC
CAatgtgggaggaagcctcTACGCCGTCCTTGCCAAATGCCCGCACCTGG
GTCTGCCCATGAAAACAGGCGTAATTGCTATCGAAGGTGGGGAGCCCACC
ATCACCTGCAAATTCCACAATTCCAAATTTGCGCTGACGGATGGGAAGTG
CAAGGCCTGGTCTGAGAGTGTCTTTGGCATAaaggggacagagggaaTCG
CAGGTTTTGTTGGAGGTTTTGGCGGTGCAAAAGGCTCACCTGCCACCGTC
TTTCCGACGTCAATGAGTGAAGAGGGCATTGTGAGCATCGAAATGTGAAT
GCATCTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTCTG
AGGCATTCCTTGGCCTCAAAAGCCCCGGTCACTTGCCTTTCCGCCGTCTT
CCTTCACTCGCTGCCACCGTACCCGTGGGTTCCGTCACGGAGCTCCCGCC
AGGCGAGCGAAAGGTTGTGGATacggaggccggggccgtgATTGTCACCA
atgtgggaggaagcctcTACGCCGTCCTTGCCAAATGCCCGCACCTGGGT
CTGCCCATGAAAACAGGCGTAATTGCTATCGAAGGTGGGGAGCCCACCAT
CACCTGCAAATTCCACAATTCCAAATTTGCGCTGACGGATGGGAAGTGCA
AGGCCTGGTCTGAGAGTGTCTTTGGCATAaaggggacagagggaaTCGCA
GGTTTTGTTGGAGGTTTTGGCGGTGCAAAAGGCTCACCTGCCACCGTCTT
TCCGACGTCAATGAGTGAAGAGGGCATTGTGAGCATCGAAATGTGAATGC
ATCTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTCTGAG
GCATTCCTTGGCCTCAAAAGCCCCGGTCACTTGCCTTTCCGCCGTCTTCC
TTCACTCGCTGCCACCGTACCCGTGGGTTCCGTCACGGAGCTCCCGCCAG
GCGAGCGAAAGGTTGTGGATacggaggccggggccgtgATTGTCACCAat
gtgggaggaagcctcTACGCCGTCCTTGCCAAATGCCCGCACCTGGGTCT
GCCCATGAAAACAGGCGTAATTGCTATCGAAGGTGGGGAGCCCACCATCA
CCTGCAAATTCCACAATTCCAAATTTGCGCTGACGGATGGGAAGTGCAAG
GCCTGGTCTGAGAGTGTCTTTGGCATAaaggggacagagggaaTCGCAGG
TTTTGTTGGAGGTTTTGGCGGTGCAAAAGGCTCACCTGCCACCGTCTTTC
CGACGTCAATGAGTGAAGAGGGCATTGTGAGCATCGAAATGTGAATGCAT
CTGGCATCCACATTGCTCGCAATTATTGCGGCACTTACTTTGTCTGAGGC
ATTCCTTGGCCTCAAAAGCCCCGGTCACTTGCCTTTCCGCCGTCTTCCTT
CACTCGCTGCCACCGTACCCGTGGGTTCCGTCACGGAGCTCCCGCCAGGC
GAGCGAAAGGTTGTGGATacggaggccggggccgtgATTGTCACCAatgt
gggaggaagcctcTACGCCGTCCTTGCCAAATGCCCGCACCTGGGTCTGC
CCATGAAAACAGGCGTAATTGCTATCGAAGGTGGGGAGCCCACCATCACC
TGCAAATTCCACAATTCCAAATTTGCGCTGACGGATGGGAAGTGCAAGGC
CTGGTCTGAGAGTGTCTTTGGCATAaaggggacagagggaaTCGCAGGTT
TTGTTGGAGGTTTTGGCGGTGCAAAAGGCTCACCTGCCACCGTCTTTCCG
ACGTCAATGAGTGAAGAGGGCATTGTGAGCATCGAAATGTGA back to top
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