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Properties
| Property Name | Value |
|---|
| Product | CAP domain protein |
| Orig transcript id | gnl|cribi|Naga_100414g4.7733.mrna |
| Orig protein id | gnl|cribi|Naga_100414g4.7733 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:674203..676170 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7191 ID=rna7191|Name=rna7191|organism=Nannochloropsis gaditana|type=mRNA|length=1151bp
TGATTCCCCGTCTGTTCCCCCTCCCTGCCCTCTTCCTTGCTCTTCGTCGG
CTCATGGACCCTTTTGCATCCTCCCCCTGCTTCCTCCCTCCCTCCCTCCC
TCCCTCTATCACTCCCTCCCTCCCTCCCAACCAAGACCTAAGGAGTGCGG
ACGCCATGGCTCTTCACGCGGCCTTAGAGCGCAACGGCACTTCCTTCGTA
CGCACGGCGTCTCCGAGAGGGCCCGACGCGGGCTACCTCTCCATGGACGG
ACAGCGGCGGGAGAAGTTCCTGGTCATAGACGCGCGCCCTCAGCTCTCTG
CACGAGCCAATCAGGCTGCGAGGGGGATGGGCTTCGAAAACACCCCCCAG
TACAAGCAGGTGTGCCGAGTCCTCTTCATGGGCGTCTCGAACATCCACGT
CATCCGGAAGAGCTGGGACGCCCTGGAGGTGCTGTGTCGCCGTCGGGAGG
GAGAGGGTGGCGGCTTTGGGATGCAGGTCGAGAACACCCGCTGGCTGTTC
CACCTCCACAAAGTCCTGGCCGGCGCCCTCCTCATCGCCCACCTCATGCA
CCACCACGGCGTCTCCCTCCTCGTCCACTGCTCCGACGGGTGGGATAGGA
CCGCTCAGCTCTGTGCGACGGCTCAACTGCTGATGGATCCGTTCTATCGG
ACTCTGACTGGCTTTCAGGCCCTCATCCACAAGGACTGGGTCGCCTTCGG
CCACAACTTCACGCGCCGCAATGGCCTCGACAGGCAGGGCTACGCTTCGA
ACGAGCGGGCCCCGATTTTTGTGCAGTGGCTCGACGTCGTCCATCAGATC
CTGCGACAGTTTCCGAATCGCTTTCAATTCACAGAAGGGCTTCTCCTCTT
CTTGGCTCGCCACGCTCATGCTGGCTGGACAGGCGACTTTCTGTACAACT
GCGAGAGGGAGAGGACCGAGGCACGTGTAACAGAGAGGAGTATCTCTATC
TTCGCCCTCATAGACGCCAACAGGCACCGCTTCCTGAACCCAGCCTACCA
GTCTTCCTCTTCGGCCTCGTCTTCTTCCTCACTCCTCACCCCGGTTACTA
GCAGCAAACGCCTAGTGCTTTGGGAGGCTTACTTCTTCTCCTGGCAGACT
GAGCTGTATGAGCTTGCCTGGCGTCAGGGTACTGGTCACCTCCCTGCTTG
A back to topprotein sequence of rna7191 >rna7191-protein ID=rna7191-protein|Name=rna7191|organism=Nannochloropsis gaditana|type=polypeptide|length=349bp
MLREGSGANSPKGYSLVEDRPRCYFTLGKDYCPAATNNKWTDYYMSYIER
TSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALK
ESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAM
TQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKL
SGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSM
SLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQT
ATRDHGSGKEKGCSSRWTPPTRHATRREMATDHKGGAPMTEDADLALAK back to topmRNA from alignment at CM002470.1:674203..676170+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7191 ID=rna7191|Name=rna7191|organism=Nannochloropsis gaditana|type=mRNA|length=1968bp|location=Sequence derived from alignment at CM002470.1:674203..676170+ (Nannochloropsis gaditana)
ATGCTGAGGGAGGGTTCAGGAGCGAACTCTCCTAAGGGGTATTCTTTGGT
CGAAGACAGGCCTCGTTGCTACTTCACACTGGGAAAAGACTACTGCCCTG
CGGCCACGAACAATAAGTGGACAGATTATTACATGTCCTACATCGAGCGC
ACGTCTCAAGTGCTGACTAATGCTGCTCGCATGGATCCCCAGGATTTCAA
GCGCATCTATAATGGTAATGACGGAGGCACCTACAAGTGCTCGACTCgga
cccttcctccccttcgatACAGTGCTAATGCGCAGCAGGCTGCTTTAAAA
GAAAGTCAAATGCTGGCTGATCCAAACTGTCCTTTTCAGCACGATACTTG
CAACAAGTACTGCAGGCTATACGGTGGCAAATGCAATTGGGATGCTCGCA
TATCCAAGTACGAGTCGAATTGGCGGGGCATGGGCGAGAACATTGCCATG
ACACAACGTAATTTGAAGGAGGAACCGAGCGCCCCAGTACTCCAGTGGCT
CGCCTCGGGTCCACATTGCTCGAACATCTTCAGTGGGGACTTCTCCCATT
TAGGTACTGGTGCCTACGACCGATACTGGACGCAGGATTTCTTGAAATTG
TCCGGCTCGACGAACAACCCTCTCCACGACGGGACGCACTACTTGCACCC
CGCCAAGACCGGTGGCAAACTCCGGTTCATGGCCTCGTTCAaaagctcct
ccgcccccaacaagatggaggtggtggtgaacGGTCAAGCCAAGTCTATG
TCCCTCCACCTAGGGAGCAGCGCTCAAGGCCTCTATGCTTACGAGCAGAG
CCAGCCGGGCTCCAGCGCCGGGTGCATCAGCTACTACTTCGTCGTCACCA
CCTCGAGCGGGTCCACCTATAACATGCCCGAGACAGGCGCCTTCCAGACC
GCCACCGTTGGCAAGTGCACCAACAACTGGATCAAAACCCGCAATGCAGG
GAGCGGCCCTGCCCCGGGCCcggctcctgcccccgccccccgacCGGTCG
CTCCTACAAGCCGCCCCACCCGCAGCCCTACTCGCAGGCCTGTATCCCGT
CCTACTCGCAGCCCCACACGCCGTCCTACTCGCAGCCCCACACGCCGTCC
TACTCGCAGCCCCACGCGCCGTCCTACTCGCAGCCCCACGCGCCGTCCTA
CTCGCAGCCCTacccgccagccccgccctccttccccacgcccgccatcT
CCAGGCGTCTCATCGAACCcgtcgccccgccccccttcctccaacccctc
gagctggccccgccctccgtcacctcgccctccttcctctgtcccctccA
GCATTCCCTCCaaccgccctcgccctccttcttcccgtccCCGACCCCCC
ACATCCTacactcgccctccttcttcccgacCCCGACCCCCCACCTCCTA
cactcgccctccgtcccgcccctctgctccctcctcggcaaGTGGACGTC
CGTCCTCCGGGTGGTCGGGCATTCCGTCTACCTTGGTTGCAGATGACATC
GATCCCTTCGACTTCTGGCCTCCGGTGACCGAGACCAAGTCCGGAGaaag
cggggcgggggatgaGAATTAAGGCGACGGCTCTGGGAATGctcgaggga
agaggggccagagggaggaggatgcgcaTGGGCGAGAAGTCAGCAGGTTC
CATGGGCGGAATGAATGACGACACAGGCACAAAATAAAAAGAATTGCTCA
GAAAATTAGGCAATATGAGAAGACAGGCTGAGGGAGATGCAGAGGAGCCT
TGAAAAAGAGACGacaaaagagaaggagctaGATAAACAATTCGAATTCA
GGAGATAGTACACATGAATGCAAGAGGGACCATGGGagcgggaaagagaa
gggttGCAGCTCCCGATGGACACCGCCGACACGACACGCCACACGACGAG
AGATGGCCACGGATCATAAGGGTGGAGCCCCTATGACTGAGGACGCGGAT
CTTGCGTTGGCGAAGTAG back to topCoding sequence (CDS) from alignment at CM002470.1:674203..676170+ >rna7191 ID=rna7191|Name=rna7191|organism=Nannochloropsis gaditana|type=CDS|length=2100bp|location=Sequence derived from alignment at CM002470.1:674203..676170+ (Nannochloropsis gaditana)
ATGCTGAGGGAGGGTTCAGGAGCGAACTCTCCTAAGGGGTATTCTTTGGT
CGAAGACAGGCCTCGTTGCTACTTCACACTGGGAAAAGACTACTGCCCTG
CGGCCACGAACAATAAGTGGACAGATTATTACATGTCCTACATCGAGCGC
ACGTCTCAAGTGCTGACTAATGCTGCTCGCATGGATCCCCAGGATTTCAA
GCGCATCTATAATGGTAATGACGGAGGCACCTACAAGTGCTCGACTCgga
cccttcctccccttcgatACAGTGCTAATGCGCAGCAGGCTGCTTTAAAA
GAAAGTCAAATGCTGGCTGATCCAAACTGTCCTTTTCAGCACGATACTTG
CAACAAGTACTGCAGGCTATACGGTGGCAAATGCAATTGGGATGCTCGCA
TATCCAAGTACGAGTCGAATTGGCGGGGCATGGGCGAGAACATTGCCATG
ACACAACGTAATTTGAAGGAGGAACCGAGCGCCCCAGTACTCCAGTGGCT
CGCCTCGGGTCCACATTGCTCGAACATCTTCAGTGGGGACTTCTCCCATT
TAGGTACTGGTGCCTACGACCGATACTGGACGCAGGATTTCTTGAAATTG
TCCGGCTCGACGAACAACCCTCTCCACGACGGGACGCACTACTTGCACCC
CGCCAAGACCGGTGGCAAACTCCGGTTCATGGCCTCGTTCAaaagctcct
ccgcccccaacaagatggaggtggtggtgaacGGTCAAGCCAAGTCTATG
TCCCTCCACCTAGGGAGCAGCGCTCAAGGCCTCTATGCTTACGAGCAGAG
CCAGCCGGGCTCCAGCGCCGGGTGCATCAGCTACTACTTCGTCGTCACCA
CCTCGAGCGGGTCCACCTATAACATGCCCGAGACAGGCGCCTTCCAGACC
GCCACCAGGGACCATGGGagcgggaaagagaagggttGCAGCTCCCGATG
GACACCGCCGACACGACACGCCACACGACGAGAGATGGCCACGGATCATA
AGGGTGGAGCCCCTATGACTGAGGACGCGGATCTTGCGTTGGCGAAGTAG
ATGCTGAGGGAGGGTTCAGGAGCGAACTCTCCTAAGGGGTATTCTTTGGT
CGAAGACAGGCCTCGTTGCTACTTCACACTGGGAAAAGACTACTGCCCTG
CGGCCACGAACAATAAGTGGACAGATTATTACATGTCCTACATCGAGCGC
ACGTCTCAAGTGCTGACTAATGCTGCTCGCATGGATCCCCAGGATTTCAA
GCGCATCTATAATGGTAATGACGGAGGCACCTACAAGTGCTCGACTCgga
cccttcctccccttcgatACAGTGCTAATGCGCAGCAGGCTGCTTTAAAA
GAAAGTCAAATGCTGGCTGATCCAAACTGTCCTTTTCAGCACGATACTTG
CAACAAGTACTGCAGGCTATACGGTGGCAAATGCAATTGGGATGCTCGCA
TATCCAAGTACGAGTCGAATTGGCGGGGCATGGGCGAGAACATTGCCATG
ACACAACGTAATTTGAAGGAGGAACCGAGCGCCCCAGTACTCCAGTGGCT
CGCCTCGGGTCCACATTGCTCGAACATCTTCAGTGGGGACTTCTCCCATT
TAGGTACTGGTGCCTACGACCGATACTGGACGCAGGATTTCTTGAAATTG
TCCGGCTCGACGAACAACCCTCTCCACGACGGGACGCACTACTTGCACCC
CGCCAAGACCGGTGGCAAACTCCGGTTCATGGCCTCGTTCAaaagctcct
ccgcccccaacaagatggaggtggtggtgaacGGTCAAGCCAAGTCTATG
TCCCTCCACCTAGGGAGCAGCGCTCAAGGCCTCTATGCTTACGAGCAGAG
CCAGCCGGGCTCCAGCGCCGGGTGCATCAGCTACTACTTCGTCGTCACCA
CCTCGAGCGGGTCCACCTATAACATGCCCGAGACAGGCGCCTTCCAGACC
GCCACCAGGGACCATGGGagcgggaaagagaagggttGCAGCTCCCGATG
GACACCGCCGACACGACACGCCACACGACGAGAGATGGCCACGGATCATA
AGGGTGGAGCCCCTATGACTGAGGACGCGGATCTTGCGTTGGCGAAGTAG back to top
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