EWM23498.1, cds7174 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|585104569|gb|EWM23498.1| (CAP domain protein [Nannochloropsis gaditana]) HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0 Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0
Query: 1 MLREGSGANSPKGYSLVEDRPRCYFTLGKDYCPAATNNKWTDYYMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRWTPPTRHATRREMATDHKGGAPMTEDADLALAK 349
MLREGSGANSPKGYSLVEDRPRCYFTLGKDYCPAATNNKWTDYYMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRWTPPTRHATRREMATDHKGGAPMTEDADLALAK
Sbjct: 1 MLREGSGANSPKGYSLVEDRPRCYFTLGKDYCPAATNNKWTDYYMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRWTPPTRHATRREMATDHKGGAPMTEDADLALAK 349
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|528892116|gb|EPZ32534.1| (hypothetical protein O9G_002311 [Rozella allomycis CSF55]) HSP 1 Score: 98.5969 bits (244), Expect = 5.283e-20 Identity = 83/273 (30.40%), Postives = 126/273 (46.15%), Query Frame = 0
Query: 42 DYYMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSAN---AQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQ---WLASGP-HCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGST-NNPLHDGTHYLHPAKTG---GKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAG---CISYYFVVTTSSGSTYNMPETGAFQT 300
D +Y+ERT LTNA R+DP+ + + N ++ GT C P N Q + M P C +QHDTC C +G C+W +RI + + ENI P +PV W+ S HC N+ + + LG + QDF S + N+ L G+H + P T L F+ ++ + + P+K+ + + QA+ +SL GSS +G+Y Y + G+ G C +Y+F V + G Y PE G F T
Sbjct: 25 DIQTTYLERTIHTLTNAVRIDPKSY--LNNFSNAGTGNCLYNGSPARHLFWNMALTQSGRFHCTSMQRSPGC-WQHDTCPSECYKFG-SCSWSSRIWSFYKKPAWIAENI-------YAGPISPVEIMDGWIRSKMGHCENLLAASATELGVANSNNCVIQDFGGASNTDYNSALVIGSH-VSPKLTSLNTNNLLFLVTYVNDAPPSKIWIQIGQQARGLSLLYGSSNRGVY-YFKLNDGNLLGNQSCQNYFFRVIDTKGRNYRFPEKGRFLT 284
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|1088323852|gb|OHB74681.1| (hypothetical protein A2Z25_09415 [Planctomycetes bacterium RBG_16_55_9]) HSP 1 Score: 100.523 bits (249), Expect = 1.076e-19 Identity = 82/286 (28.67%), Postives = 129/286 (45.10%), Query Frame = 0
Query: 41 TDYYMSYIERTSQVLTNAARMDPQDFKRIYNGN---DGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWL--------------ASGPHCSNIFSGDFSHLGTG-------AYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSS--APNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQT 300
D Y + ER + V TNA RM PQ ++ Y + D + + + P+ Y QAA ++ +A+ +C FQHD C+ W+ RI + R + ENIA + K A V WL A+G H +++ + + +GTG A+ +W +DF ++ P+ G H GK F+ +++ S AP ++V+V+G MSL LG+ A G Y + S+ G+ C YYF+ T+SG + P G F T
Sbjct: 260 VDGYPNLFERRTLVYTNAMRMAPQQYRDKYMADFQPDASSILQTYSPVEPVYYQPLLNQAARFHAEDMAENDC-FQHDDCDG--------SAWNDRIRGFYPEARMIAENIAYGYPSAK----AVVDAWLCDETGGRCAADGTQAAG-HRTSMVNDGYRQIGTGWAEDEGGAWRSFWVEDFASNEPASRPPIVAGCHDFL---VSGKTSFLVNYRDVSDRAPAAVQVIVSGTTYDMSLDLGTQAAGTYRVDVSRAGN---CREYYFLALTASGQLWRYPGPGVFLT 525
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|290976850|ref|XP_002671152.1| (predicted protein [Naegleria gruberi] >gi|284084718|gb|EFC38408.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 90.5077 bits (223), Expect = 4.049e-16 Identity = 80/299 (26.76%), Postives = 121/299 (40.47%), Query Frame = 0
Query: 44 YMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDR--------YWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSS------APNKMEVVVNGQAKSMSLHLGSS------AQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRWTPPTR 322
Y Y+E+T VLTN ARM P FK + T LPPL N ++ S+ +A C FQH++C+ G + R++ + + M ENIA Q P + + W+ S H +NI ++ LG G Y + YWTQ+F S +NP+ TH T + F+A++ + AP + + +N MS+ S G + Y ++ S C YY S+G Y P G T G+ C+S + R
Sbjct: 98 YSRYVEKTVHVLTNWARMSPSGFKTRFLNLFQAEKSLETTGLPPLFEHFNLVESGRFHSKDMATVPC-FQHNSCD-------GTLTF-TRVATFYTKPAAMAENIAAGQ----TSPLSVTMAWINSDGHRANILGSSYTLLGVGHYPKVAATGFSDYWTQNFASGSHGISNPIVAATHITFATDT---VTFLANYYHKADLGKGVAPLNVSIFINDVEYPMSIPTSSMYTDSSLNAGTFEYNTTRLSSGTACRKYYIKAVDSNGYKYYYPSVGYLLT------QGENSACTSNYLRAVR 374
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|290982482|ref|XP_002673959.1| (predicted protein [Naegleria gruberi] >gi|284087546|gb|EFC41215.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 87.4261 bits (215), Expect = 1.742e-15 Identity = 81/277 (29.24%), Postives = 120/277 (43.32%), Query Frame = 0
Query: 44 YMSYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGA--------YDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASF------KSSSAPNKMEVVVNGQAKSMSLHLGS-----SAQGLYAYE-QSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQT 300
Y Y E+T VLTN ARM P FK + + L PL N ++A S ++ NC F H +CN G+ + + Y N GM ENIA Q P + W+ S H +NI G FS LG G Y YWTQ+F+ S +NP+ +H + T G+L F+A++ +S +++ ++ + +M+L + + SA G+ +E + S+A C YY S G Y P G T
Sbjct: 91 YSLYFEKTVHVLTNWARMSPVGFKSRFGSLFKSGVSLAASGLVPLFEHFNLVESARYHSYDMSFNNC-FSHASCN-------GEDTFVRIATFYNRNNIGMAENIAAGQ----TTPLDVTMTWINSDLHRANIL-GSFSLLGVGYFPKLNNADYSDYWTQNFVSGSHGISNPIVSVSHLI---LTSGQLTFLANYYHKYDITNSKQLKSIQLFIDDKGYTMTLPVTNQFDDKSANGMGTFEFTTSVNSTATCRKYYVKAIDSFGYAYYYPAFGYLLT 351
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|470505421|ref|XP_004348569.1| (mucin, putative, partial [Acanthamoeba castellanii str. Neff] >gi|440801086|gb|ELR22111.1| mucin, putative, partial [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 86.6557 bits (213), Expect = 2.300e-15 Identity = 93/310 (30.00%), Postives = 125/310 (40.32%), Query Frame = 0
Query: 46 SYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRTLP---PLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEP----SAPVLQW----------------LASGPHCSNI----FSGDFSHLG--------TGAYDRYWTQDFLKLSGST-NNPLHDGTHYLHPAKTGGKLRFMASF-KSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTATRDHGSGKEKGCSSRWT 318
SY ERT L NAAR+ P F Y G LP PL + +AA SQ LA+ Q ++C+ W R+ S +GE + Q +P S V W +SG C+ + S +S G TG Y YWT D+ + T NP+ G+H + G +RF A++ + AP +V V G ++L G+ QG Y Y S GS GC SYYF T++SG Y +PETG F T E CS+ WT
Sbjct: 37 SYQERTVGALINAARVGPSGFAAAYMATAGYPASGIADGLPAQLPLYFDPKLSEAASGHSQDLANNCHAVQFNSCDG--------TAWYTRVRNIYSCTGLVGEGL---QYAYSGDPLTAVSDGVCGWNQDASGNYVCCPASGKTSSGSTCNGLRNMYLSSSYSRFGVGYGADAQTGYY--YWTTDYGACNTETYANPIASGSHLIQS----GNVRFFAAYYDAVGAPQSAKVFVGGSPLDLALDAGTGNQGNY-YAVSAAGS--GCRSYYFQFTSASGGVYRLPETGYFNTF-------GEGSCSTDWT 319
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|330799485|ref|XP_003287775.1| (hypothetical protein DICPUDRAFT_32986 [Dictyostelium purpureum] >gi|325082230|gb|EGC35719.1| hypothetical protein DICPUDRAFT_32986 [Dictyostelium purpureum]) HSP 1 Score: 86.6557 bits (213), Expect = 2.440e-15 Identity = 84/289 (29.07%), Postives = 125/289 (43.25%), Query Frame = 0
Query: 46 SYIERTSQVLTNAARMDPQDFKRIYNGNDGGTYKCSTRT-----LPPLRYSANAQQAALKESQMLADPNCP----FQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIA---------MTQRNL---KEEPSAPVLQWLASGPHCSNIFSGD--FSHLGTGAYDR-----YWTQDFL--KLSGSTNNPLHDGTHYLHPAKTGGKLRFMASF---KSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTA 301
+Y+ER S + N RM P+++KR + G T + + PL Y + + A S +A FQH+ CN + NWD+ I K GENIA T L K P Q +A H I S D F +G G Y+ YWTQDFL + + +P++ G H +PA T G+ F+ +F K + KM +V + ++ L G+S G+Y+++ + + C YYF TT+ + PETG QT
Sbjct: 30 NYLERESHNMLNVVRMFPREYKRDFMVGFQGIDDILTESRYPSGVNPLFYYNSLNRLAKAHSFDMATKETSTSKCFQHNDCNG-TTVNDRFKNWDSCIEK-----GAYGENIAWAKPPQTGIATNNQLICEKFNAPCPSDQVVAEIGHRDIIMSFDYPFYSVGVGNYESEFNSLYWTQDFLGTQCVSAPQSPIYSGYHTYYPA-TSGETLFLVTFYSPKGALVAKKMNIVFSNTKINIPLRYGNSTFGIYSHKAT---TFTDCQQYYFETTTTDNKVFRYPETGYLQTT 308
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|1160555927|ref|XP_020435860.1| (hypothetical protein PPL_02810 [Polysphondylium pallidum PN500] >gi|281209575|gb|EFA83743.1| hypothetical protein PPL_02810 [Polysphondylium pallidum PN500]) HSP 1 Score: 81.2629 bits (199), Expect = 9.707e-14 Identity = 67/244 (27.46%), Postives = 113/244 (46.31%), Query Frame = 0
Query: 85 LPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHC----------SNIFSGDFSHLG-------TGAYDRYWTQDFLKLSGSTN---NPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKS------MSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSSGSTYNMPETGAFQTAT 302
+ P+ Y + + S +A C FQHD+CN + N D + R ENIA + + + + + +G C + S ++ +G T + YWTQDF +L+G +P+ G+H KLR++A++ S++AP +++ +N + S +SLHLGS+++G+Y YE P + C SY+F TT+ G+TY P +G +T T
Sbjct: 67 VDPVYYDDKMNKLSKLHSDDMAMNGC-FQHDSCNGTGIMQRVFANLDPKC------LRAFAENIAAGYSSGLDIINYWICEKTLTGKECYPDGTKDGHRVALMSSKYNTVGTSRVVNDTSRFKTYWTQDF-ELNGCNKVPPSPIPSGSHTF----VNNKLRYLAAWSSTAAPTSVKIHLNQRLLSDEKQYQLSLHLGSASKGIYMYE---PDTYNECQSYFFTFTTADGTTYRYPTSGFLKTVT 295
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|66811472|ref|XP_639916.1| (WSC domain-containing protein [Dictyostelium discoideum AX4] >gi|60466867|gb|EAL64911.1| WSC domain-containing protein [Dictyostelium discoideum AX4]) HSP 1 Score: 82.0333 bits (201), Expect = 2.139e-13 Identity = 66/244 (27.05%), Postives = 110/244 (45.08%), Query Frame = 0
Query: 46 SYIERTSQVLTNAARMDPQDFKRIYN--GNDGGTYKCSTRTLPPLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIA-------------MTQRNLKEEPSAPVLQWLASGP--HCSNIFSGDFSHLGTG-------AYDRYWTQDF--LKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYA 263
++ ER++ VL N+ R+ P++++ Y GN ++PPL + + +AL ++ ++ NC F H++C+ + D RI++Y GENIA + + S P ASG H +NI + +F +G G Y YWTQDF TN P+H G+H KL FM + P VV++G+ ++L +GS ++G+Y+
Sbjct: 31 NWFERSNHVLVNSVRIAPKEYQNRYTQFGNQDVLSPSIYPSVPPLFFEFSLGASALAHARDMSINNC-FSHESCDG--------TDSDTRINEYYHCDEIHGENIAAGYDSPLITNNQWVCDDGTNDPYSNPTCAQDASGSDGHRANIMNPNFKAIGVGFSFTSDSTYHSYWTQDFGAQPCFNITNQPIHSGSHLF---LNQNKLTFMVDWYDQVEPTVAYVVISGKPNKLNLEMGSKSKGIYS 262
BLAST of EWM23498.1 vs. NCBI_GenBank
Match: gi|297181016|gb|ADI17217.1| (uncharacterized protein with scp/pr1 domains [uncultured delta proteobacterium HF0070_10I02]) HSP 1 Score: 78.5666 bits (192), Expect = 1.275e-12 Identity = 73/273 (26.74%), Postives = 120/273 (43.96%), Query Frame = 0
Query: 41 TDYYMSYIERTSQVLTNAARMDPQDF-------KRIYNGNDGGTYKCSTRTLP--PLRYSANAQQAALKESQMLADPNCPFQHDTCNKYCRLYGGKCNWDARISKYESNWRGMGENIAMTQRNLKEEPSAPVLQWLASGPHCSNIFSGDFSHLGTGAYDRYWTQDFLKLSGSTNNPLHDGTHYLHPAKTGGKLRFMASFKSSSAPNKMEVVVNGQAKSMSLHLGSSAQGLYAYEQSQPGSSAGCISYYFVVTTSS-GSTYNMPETGAFQTATR 303
D Y S+ ER + TN R+DP F R + +D ++P PL Y + + SQ + D N F H + + ++ R++++ +GENIA N + S W+ S H +NI +GD++ +G G Y+TQ+F + + +T+ P+ H P G + A F+ P+ + +V+G+ +SL G + QG+Y+ E + G C YYF T TY PE G++ T
Sbjct: 19 VDGYPSWAERDVHLWTNVVRVDPSAFFGPGAPDSRPCDLDD----FVGDESVPKAPLFYEYHLNDSGRFHSQDMYD-NDWFNHSSSDG--------TSFGERVARFYQESGYIGENIANGYANGE---SVVFDGWMCSAGHRANIMNGDYNEMGVGVVSLYYTQNFAEGTLATDGPIAMANHL--PEIPTGPVEIFADFQGFE-PDSFDAIVDGKPIPLSLTYGVAHQGVYSTEMTATG-ELDCHEYYFRWTKGDRRGTY--PEDGSYMFGTE 269 The following BLAST results are available for this feature:
BLAST of EWM23498.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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