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Properties
| Property Name | Value |
|---|
| Product | Pleckstrin like protein |
| Orig transcript id | gnl|cribi|Naga_100868g1.3650.mrna |
| Orig protein id | gnl|cribi|Naga_100868g1.3650 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:665018..666161 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7189 ID=rna7189|Name=rna7189|organism=Nannochloropsis gaditana|type=mRNA|length=946bp
AGATGCGGGTTCTGAGGAGAGTGTTCGAAGTATCTTGTGTGTGTGACGGC
GGATATAAGATATGAAGTGGTGCGACGGAAGATGGTTCTCAACTGCAAGC
GACCCGATCGGACCCCGTCAATTTTGGCACCTTTCCAAAGGACATTATGA
GTTACACCAGGCGAATTCCTATGTAATGATATAGAATTTATAATTTGTGT
GACAGCGGGAGAAGGGATCCATGCTGCGGCTTCCTCGTGCAGGAGAAGAA
ATCACAGGAAAAAGAACAATTGAAGGGGGCATGGCTAAATTCGCATGAAT
AGAACAAGACGAGAATGTGCTATGTCTGAAAGAATATCCGTTGGCTGTCA
CGAGTTGACGTGGGCGGGGATATGTGGGGGGAGGGAGCATATACAGCCGG
TCAATAACAGGGAAGTCATGCCGGACCCTTGGCTTTTGAGAAATCAGGGG
CCAAGATCCGAGCGAGCGTACCTCCTGGAAGTGTCTGGTACAACATCTCC
GCAGGGTGTCGGTCAAGGAAGTGTGGCGAACACCGCTTGGGCAGTTGGAG
GTGGCGGAGAGACATGGATGCAAAAGTCCCGGGGGGAGACGCCTGCTTGG
CTCTAGGAAAGTAAAGTGTTGCCCCTCCGAACTTTTATTAAACACGTCTC
TTTGCCGAAATTACATCCCCACGCGGTGTGTTGTCGGTTCCCTGGCCGGC
ATGTCGCATCACAGGGCAAAGAAGAGGGCAATGGAGCCGTCCCAAGCCAT
GAGACGGGTATTTTCACTCCATGAAGAGGCATAGGAAAAAAACGAGGCCG
GAGAGGATAGAGAGGATTCCTTGAAAGAAGCCCGAATGTCTTTCCTTGTT
GGTTTTTTCTTCTTTAAAATACGCGATTTGCTTTGACATGTCCTGATGTA
TGGATTTCCCCGGAAGATTTAATTCAGCCCTAGTCATACCTCCCCC back to topprotein sequence of rna7189 >rna7189-protein ID=rna7189-protein|Name=rna7189|organism=Nannochloropsis gaditana|type=polypeptide|length=210bp
MEGEVASVSATSSELHEGPITSSTTSGVLPAPPNTVKKAIVPPSSRPQAG
LLHLLGQEGSAAESLGCNGEESERTCNERDQSDGCLMSNTWEATCAASLP
RLGASASEGGRDGGMEGGRGGKPGSRTLPFVLLKGVLWEQRQLVFKFWRQ
RYCELAPTELRIFKDKTMLHLQSSIPIAASSQLEEAELPHREAFTLRTGT
WRGKGGREEG back to topmRNA from alignment at CM002470.1:665018..666161+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7189 ID=rna7189|Name=rna7189|organism=Nannochloropsis gaditana|type=mRNA|length=1144bp|location=Sequence derived from alignment at CM002470.1:665018..666161+ (Nannochloropsis gaditana)
AGCTTTGATCATTCAGAGCTGTGGGTAAAATGTCATGTTGACTCTTGTCT
CTTTTTTACTGTACAGGCAAGGATTTCCTAGCCCCTCTCGAGCATTCTTG
TTCGAGCTAGACGCTGCAGGACAAGCAGGCAAAGCTTAGAGACACCATCC
GACGCTTGATGATGAACGGCTAGTCTGGCATAATATGTTATCATCATTCC
CATCCTGTCGTCGTCAAAATTAAACGAGACGTCAAAATTGCAAGTCCTGG
TCTCGCAAGTCTAAACAGCCAGCTTTACGcaatggaaggagaagttGCCA
GTGTAAGCGCGACCTCCTCTGAATTACATGAGGGTCCGATCACCTCAAGC
ACAACATCAGGtgtcctccctgctcctcccaatACTGTGAAGAAAGCTAt
tgtccctccttcttctcgcccgcAGGCCGGCTTGCTCCATCTTCTCGGTC
AGGAGGGCAGCGCCGCGGAAAGCCTCGGGTGcaatggggaggaaagcgag
cgcACGTGTAATGAAAGGGATCAATCCGATGGGTGTTTGATGTCCAACAC
ATGGGAAGCCACGTGTGCGGCGTCATTGCCCCGATTGGGAGCGAGcgcga
gcgagggagggagggatggaggaatggagggaggaaggggaggaaaaccA
GGGTCGAGGACCTTGCCCTTCGTCCTGCTCAAGGGGGTGTTGTGGGAACA
GCGTcaggtgaggaaggaggagggggggaagaagacgtgtgaagccctct
ctctcgcttcTCCCTACCCCCGAGGTCCTGACCAGGTCCTCCCCGCGacg
cccctttctcctctcctcactCAGCTCGTTTTCAAATTCTGGCGGCAACG
CTACTGTGAGCTTGCTCCCACGGAGCTGCGTATTTTTAAGGACAAGACAA
TGCTCCATCTCCAggttctccctctcttcctccctccctccctccctccc
tccctccatgcctccctcttccttgctccctcaCATCCCGccgttccccc
ctcccgcgtccctcttctttccctcccagtcAAGCATCCCCATCGCTGCG
TCTTCCCAGCtcgaggaggccgagctgCCCCACCGCGAAGCTTTCACATT
GCGCACAGGcacgtggagggggaagggagggagggaggaaggga back to topCoding sequence (CDS) from alignment at CM002470.1:665018..666161+ >rna7189 ID=rna7189|Name=rna7189|organism=Nannochloropsis gaditana|type=CDS|length=1893bp|location=Sequence derived from alignment at CM002470.1:665018..666161+ (Nannochloropsis gaditana)
atggaaggagaagttGCCAGTGTAAGCGCGACCTCCTCTGAATTACATGA
GGGTCCGATCACCTCAAGCACAACATCAGGtgtcctccctgctcctccca
atACTGTGAAGAAAGCTAttgtccctccttcttctcgcccgcAGGCCGGC
TTGCTCCATCTTCTCGGTCAGGAGGGCAGCGCCGCGGAAAGCCTCGGGTG
caatggggaggaaagcgagcgcACGTGTAATGAAAGGGATCAATCCGATG
GGTGTTTGATGTCCAACACATGGGAAGCCACGTGTGCGGCGTCATTGCCC
CGATTGGGAGCGAGcgcgagcgagggagggagggatggaggaatggaggg
aggaaggggaggaaaaccAGGGTCGAGGACCTTGCCCTTCGTCCTGCTCA
AGGGGGTGTTGTGGGAACAGCGTcagCTCGTTTTCAAATTCTGGCGGCAA
CGCTACTGTGAGCTTGCTCCCACGGAGCTGCGTATTTTTAAGGACAAGAC
AATGCTCCATCTCCAgtcAAGCATCCCCATCGCTGCGTCTTCCCAGCtcg
aggaggccgagctgCCCCACCGCGAAGCTTTCACATTGCGCACAGGcacg
tggagggggaagggagggagggaggaagggaatggaaggagaagttGCCA
GTGTAAGCGCGACCTCCTCTGAATTACATGAGGGTCCGATCACCTCAAGC
ACAACATCAGGtgtcctccctgctcctcccaatACTGTGAAGAAAGCTAt
tgtccctccttcttctcgcccgcAGGCCGGCTTGCTCCATCTTCTCGGTC
AGGAGGGCAGCGCCGCGGAAAGCCTCGGGTGcaatggggaggaaagcgag
cgcACGTGTAATGAAAGGGATCAATCCGATGGGTGTTTGATGTCCAACAC
ATGGGAAGCCACGTGTGCGGCGTCATTGCCCCGATTGGGAGCGAGcgcga
gcgagggagggagggatggaggaatggagggaggaaggggaggaaaaccA
GGGTCGAGGACCTTGCCCTTCGTCCTGCTCAAGGGGGTGTTGTGGGAACA
GCGTcagCTCGTTTTCAAATTCTGGCGGCAACGCTACTGTGAGCTTGCTC
CCACGGAGCTGCGTATTTTTAAGGACAAGACAATGCTCCATCTCCAgtcA
AGCATCCCCATCGCTGCGTCTTCCCAGCtcgaggaggccgagctgCCCCA
CCGCGAAGCTTTCACATTGCGCACAGGcacgtggagggggaagggaggga
gggaggaagggaatggaaggagaagttGCCAGTGTAAGCGCGACCTCCTC
TGAATTACATGAGGGTCCGATCACCTCAAGCACAACATCAGGtgtcctcc
ctgctcctcccaatACTGTGAAGAAAGCTAttgtccctccttcttctcgc
ccgcAGGCCGGCTTGCTCCATCTTCTCGGTCAGGAGGGCAGCGCCGCGGA
AAGCCTCGGGTGcaatggggaggaaagcgagcgcACGTGTAATGAAAGGG
ATCAATCCGATGGGTGTTTGATGTCCAACACATGGGAAGCCACGTGTGCG
GCGTCATTGCCCCGATTGGGAGCGAGcgcgagcgagggagggagggatgg
aggaatggagggaggaaggggaggaaaaccAGGGTCGAGGACCTTGCCCT
TCGTCCTGCTCAAGGGGGTGTTGTGGGAACAGCGTcagCTCGTTTTCAAA
TTCTGGCGGCAACGCTACTGTGAGCTTGCTCCCACGGAGCTGCGTATTTT
TAAGGACAAGACAATGCTCCATCTCCAgtcAAGCATCCCCATCGCTGCGT
CTTCCCAGCtcgaggaggccgagctgCCCCACCGCGAAGCTTTCACATTG
CGCACAGGcacgtggagggggaagggagggagggaggaaggga back to top
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