EWM23501.1, cds7172 (CDS) Nannochloropsis gaditana

Overview
NameEWM23501.1
Unique Namecds7172
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:665299..665724 +
Alignment locationCM002470.1:665842..665931 +
Alignment locationCM002470.1:666047..666161 +

Link to JBrowse

Properties
Property NameValue
End range.
End range666161
Protein idEWM23501.1
ProductPleckstrin like protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100868g1.3650.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:665299..665724 +
CM002470.1supercontigCM002470.1:665842..665931 +
CM002470.1supercontigCM002470.1:666047..666161 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom
Homology
[Close]
BLAST of EWM23501.1 vs. NCBI_GenBank
Match: gi|585104576|gb|EWM23501.1| (Pleckstrin like protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 423.32 bits (1087), Expect = 8.924e-150
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 
Query:    1 MEGEVASVSATSSELHEGPITSSTTSGVLPAPPNTVKKAIVPPSSRPQAGLLHLLGQEGSAAESLGCNGEESERTCNERDQSDGCLMSNTWEATCAASLPRLGASASEGGRDGGMEGGRGGKPGSRTLPFVLLKGVLWEQRQLVFKFWRQRYCELAPTELRIFKDKTMLHLQSSIPIAASSQLEEAELPHREAFTLRTGTWRGKGGREEG 210
            MEGEVASVSATSSELHEGPITSSTTSGVLPAPPNTVKKAIVPPSSRPQAGLLHLLGQEGSAAESLGCNGEESERTCNERDQSDGCLMSNTWEATCAASLPRLGASASEGGRDGGMEGGRGGKPGSRTLPFVLLKGVLWEQRQLVFKFWRQRYCELAPTELRIFKDKTMLHLQSSIPIAASSQLEEAELPHREAFTLRTGTWRGKGGREEG
Sbjct:    1 MEGEVASVSATSSELHEGPITSSTTSGVLPAPPNTVKKAIVPPSSRPQAGLLHLLGQEGSAAESLGCNGEESERTCNERDQSDGCLMSNTWEATCAASLPRLGASASEGGRDGGMEGGRGGKPGSRTLPFVLLKGVLWEQRQLVFKFWRQRYCELAPTELRIFKDKTMLHLQSSIPIAASSQLEEAELPHREAFTLRTGTWRGKGGREEG 210
The following BLAST results are available for this feature:
BLAST of EWM23501.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104576|gb|EWM23501.1|8.924e-150100.00Pleckstrin like protein, partial [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7189rna7189Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications