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Properties
| Property Name | Value |
|---|
| Product | beta-lactamase |
| Orig transcript id | gnl|cribi|Naga_102309g1.10369.mrna |
| Orig protein id | gnl|cribi|Naga_102309g1.10369 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:660308..660985 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7187 ID=rna7187|Name=rna7187|organism=Nannochloropsis gaditana|type=mRNA|length=467bp
TGTAGGCCAATCGCCACATTAAGAGGCGTGGCGAAATCTCTTCCACAGGT
CATGATTTATTTCTCCAGAACTTCAAAAGGGGTGTTGGTCCCCCTCGTCC
TAGCCCTACTCGTGGCATGCACTCATGCCATGGAAGTGGCCACTTCTCCT
GAAGAAATGGGCATGTCCTCTGCGCGGCTCAACCAGATCACGCAGGAGCT
GCAAAAGCTCGTGGATGACGGCGACCTTCCCGGCGCTGCTTTCATGGTCA
CGCGGGGAGGGAAATACGTGTACCACGGAGAGGTGGGGTACGCGGACCTG
GAGACCATGACTGGCTTTAGGTCGAATACAATTTGCCGGCTGCTCTCCAT
GAGCAAGCCGGTGGGGGCGGTGGCCATCATGAAGCTCATCGAGGACAAAA
AGCTCGCCTTCAGCGACCCTCTTTCGAAATACCTGCCGGAGTGGGCAGGT
GCGGAAGGAGGGAGGGA back to topprotein sequence of rna7187 >rna7187-protein ID=rna7187-protein|Name=rna7187|organism=Nannochloropsis gaditana|type=polypeptide|length=75bp
MCRSTSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRF
GQMLLNGGTLDGVRILSPQSRPQHR back to topmRNA from alignment at CM002470.1:660308..660985+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7187 ID=rna7187|Name=rna7187|organism=Nannochloropsis gaditana|type=mRNA|length=678bp|location=Sequence derived from alignment at CM002470.1:660308..660985+ (Nannochloropsis gaditana)
atGTGTCGCAGCACTTCCTACACGGTGATGCCAtccggccgcctccagtT
TATTTTCCGACCCCGCGCGGACTTTGTGTCCTACTCGCCCCCCACCTTCA
AGAGTCTGGGGGGAGGCATCGTCAGCACAGCCAAGGTCCgagccttgccc
ctccctccgtcccgtcctccccctcctcttcgcctcgcCCTTGTGTCCCT
GCGTGACCTCCACTCtcattctccctccccttcatgtcctctcttccccc
tgttcctccttcgtttccttcgctcgccctcccttgtcgcAGGACTTCAC
ACGTTTCGGACAGATGCTTCTGAACGGTGCGCTGAACGGAAGGGagagtt
ggaggaaggggaagaagggggggagggaaggaggaagaagagacagaaag
ggagagaaagaggatgcgAGAATGCAGACGAAGCATGCTGCAAATCTTTC
CAGATTTATGGCCCTTTCGTCAAGCACCTCCTGACGGCCAACTCAatgtc
cttgccctccctccctccctccctccccccctccctccctccctcctcca
ggcggCACCTTGGACGGCGTGcgcatcctttccccccagtCCGTGGACCT
GATGTGGCGCAATTACCTGCCtgatgccctccttcccatggACCTCAACG
GCTGGGCAAGCGACCCCAACACCGGtaa back to topCoding sequence (CDS) from alignment at CM002470.1:660308..660985+ >rna7187 ID=rna7187|Name=rna7187|organism=Nannochloropsis gaditana|type=CDS|length=912bp|location=Sequence derived from alignment at CM002470.1:660308..660985+ (Nannochloropsis gaditana)
atGTGTCGCAGCACTTCCTACACGGTGATGCCAtccggccgcctccagtT
TATTTTCCGACCCCGCGCGGACTTTGTGTCCTACTCGCCCCCCACCTTCA
AGAGTCTGGGGGGAGGCATCGTCAGCACAGCCAAGGACTTCACACGTTTC
GGACAGATGCTTCTGAACGgcggCACCTTGGACGGCGTGcgcatcctttc
cccccagtCCCGACCCCAACACCGGtaaatGTGTCGCAGCACTTCCTACA
CGGTGATGCCAtccggccgcctccagtTTATTTTCCGACCCCGCGCGGAC
TTTGTGTCCTACTCGCCCCCCACCTTCAAGAGTCTGGGGGGAGGCATCGT
CAGCACAGCCAAGGACTTCACACGTTTCGGACAGATGCTTCTGAACGgcg
gCACCTTGGACGGCGTGcgcatcctttccccccagtCCCGACCCCAACAC
CGGtaaatGTGTCGCAGCACTTCCTACACGGTGATGCCAtccggccgcct
ccagtTTATTTTCCGACCCCGCGCGGACTTTGTGTCCTACTCGCCCCCCA
CCTTCAAGAGTCTGGGGGGAGGCATCGTCAGCACAGCCAAGGACTTCACA
CGTTTCGGACAGATGCTTCTGAACGgcggCACCTTGGACGGCGTGcgcat
cctttccccccagtCCCGACCCCAACACCGGtaaatGTGTCGCAGCACTT
CCTACACGGTGATGCCAtccggccgcctccagtTTATTTTCCGACCCCGC
GCGGACTTTGTGTCCTACTCGCCCCCCACCTTCAAGAGTCTGGGGGGAGG
CATCGTCAGCACAGCCAAGGACTTCACACGTTTCGGACAGATGCTTCTGA
ACGgcggCACCTTGGACGGCGTGcgcatcctttccccccagtCCCGACCC
CAACACCGGtaa back to top
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