EWM23503.1, cds7170 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|585104579|gb|EWM23503.1| (beta-lactamase [Nannochloropsis gaditana]) HSP 1 Score: 152.91 bits (385), Expect = 3.731e-47 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 Query: 1 MCRSTSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQSRPQHR 75 MCRSTSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQSRPQHR Sbjct: 1 MCRSTSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQSRPQHR 75
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|737023048|ref|WP_035018427.1| (serine hydrolase [Caulobacter sp. UNC358MFTsu5.1]) HSP 1 Score: 63.1586 bits (152), Expect = 5.622e-10 Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 0 Query: 30 PPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 PP S GGG++STA DF RF QM+LNGGTLDGVRIL+P+S Sbjct: 294 PPAAPSGGGGLLSTAGDFARFAQMILNGGTLDGVRILTPES 334
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|1200435291|gb|OUV51668.1| (serine hydrolase [Alphaproteobacteria bacterium TMED110]) HSP 1 Score: 62.7734 bits (151), Expect = 8.306e-10 Identity = 27/42 (64.29%), Postives = 36/42 (85.71%), Query Frame = 0 Query: 29 SPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 SPP+F+S G G+VSTA+D+ RF QM+LN G LDG+RILSP++ Sbjct: 317 SPPSFESGGAGLVSTARDYLRFSQMMLNKGELDGIRILSPKT 358
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|499223486|ref|WP_010921026.1| (serine hydrolase [Caulobacter vibrioides] >gi|16127420|ref|NP_421984.1| hypothetical protein CC_3190 [Caulobacter crescentus CB15] >gi|13424864|gb|AAK25152.1| conserved hypothetical protein [Caulobacter crescentus CB15]) HSP 1 Score: 62.7734 bits (151), Expect = 9.035e-10 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 4 STSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 + Y + PSG++ P S P+ KS GGG+VSTA D+ RF +MLLNGG LDGVR+LSP++ Sbjct: 319 TACYALTPSGKVVLQDDPEKSRY-LSDPSVKSGGGGLVSTADDYMRFCRMLLNGGELDGVRLLSPKT 384
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|919130718|ref|WP_052686350.1| (hypothetical protein [Burkholderiaceae bacterium 16] >gi|770092296|gb|KJK09615.1| beta-lactamase [Burkholderiaceae bacterium 16]) HSP 1 Score: 62.3882 bits (150), Expect = 1.089e-9 Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0 Query: 24 DFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 D+ +PP + S G G++STA D+ RF QMLLNGG LDGVR+LSP+S Sbjct: 264 DYEDDNPPQWHSGGAGLLSTAGDYARFCQMLLNGGVLDGVRLLSPKS 310
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|594552908|ref|WP_024265923.1| (serine hydrolase [Caulobacter vibrioides] >gi|594552361|ref|YP_002518666.2| beta-lactamase family protein [Caulobacter crescentus NA1000] >gi|584304228|gb|ACL96758.2| beta-lactamase family protein [Caulobacter crescentus NA1000]) HSP 1 Score: 62.3882 bits (150), Expect = 1.095e-9 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 4 STSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 + Y + PSG++ P S P+ KS GGG+VSTA D+ RF +MLLNGG LDGVR+LSP++ Sbjct: 237 TACYALTPSGKVVLQDDPEKSRY-LSDPSVKSGGGGLVSTADDYMRFCRMLLNGGELDGVRLLSPKT 302
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|1011175032|ref|WP_062096161.1| (serine hydrolase [Caulobacter sp. CCH5-E12]) HSP 1 Score: 62.3882 bits (150), Expect = 1.128e-9 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 4 STSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 + Y + PSG++ P S P+ KS GGG+VSTA D+ RF +MLLNGG LDGVR+LSP++ Sbjct: 237 TACYALTPSGKVVLQDDPEKSRY-LSDPSVKSGGGGLVSTADDYMRFCRMLLNGGELDGVRLLSPKT 302
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|295430104|gb|ADG09276.1| (beta-lactamase [Caulobacter segnis ATCC 21756]) HSP 1 Score: 62.003 bits (149), Expect = 1.772e-9 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 4 STSYTVMPSGRLQFIFRP-RADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 + Y + PSG++ P ++ F+S P+ KS GGG+VSTA D+ RF +MLLNGG LDG R+LSP++ Sbjct: 266 TACYALTPSGKVVLQDDPEKSRFLS--DPSLKSGGGGLVSTADDYMRFCRMLLNGGELDGARLLSPKT 331
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|753782528|ref|WP_041538171.1| (serine hydrolase [Caulobacter segnis]) HSP 1 Score: 62.003 bits (149), Expect = 1.805e-9 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 4 STSYTVMPSGRLQFIFRP-RADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 + Y + PSG++ P ++ F+S P+ KS GGG+VSTA D+ RF +MLLNGG LDG R+LSP++ Sbjct: 237 TACYALTPSGKVVLQDDPEKSRFLS--DPSLKSGGGGLVSTADDYMRFCRMLLNGGELDGARLLSPKT 302
BLAST of EWM23503.1 vs. NCBI_GenBank
Match: gi|1113123001|gb|OJT98672.1| (serine hydrolase [Alphaproteobacteria bacterium 65-7]) HSP 1 Score: 61.6178 bits (148), Expect = 2.345e-9 Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0 Query: 2 CRSTSYTVMPSGRLQFIFRPRADFVSYSPPTFKSLGGGIVSTAKDFTRFGQMLLNGGTLDGVRILSPQS 70 R + + GRL+ +F D +SPP +S GGG+V TA+D+ RF +MLLN G LDG R+LSP++ Sbjct: 222 ARFAACYALKDGRLE-LFDDARDSPWFSPPKLESGGGGLVGTAQDYLRFARMLLNEGELDGARLLSPKT 289 The following BLAST results are available for this feature:
BLAST of EWM23503.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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