rna7177, rna7177 (mRNA) Nannochloropsis gaditana

Overview
Namerna7177
Unique Namerna7177
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length644
Alignment locationCM002470.1:633095..634934 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100352g1.221.mrna
Orig protein idgnl|cribi|Naga_100352g1.221
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:633095..634934 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100352g1gene6940Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7177rna7177-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23513.1cds7160Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7177 ID=rna7177|Name=rna7177|organism=Nannochloropsis gaditana|type=mRNA|length=644bp
CGCCCTCCCCTCCCAGGGATTCATCATCGACCAGCAGATCCACCCCATCA
TCCAGAGCACTATGGGCCACGTCGGGAAACTCGACCTGCTAAAGGCTCTG
GGCGAGCTCCTGCGCCTGGCGATTCCCTCCACCTTTGTCTGGCTCATCAC
CTTCTACGTCTATTTCCACTGCACGCTGAATTTGTTTGCCGAGATCACGC
GTTTCGGGGACCGCCTATTCTTCAAGGACTGGTGGAACTGCACCAGCTTC
TCGCGCTACTGGCGGACCTGGAACCTCCCAGTCCATCAATTCCTCGTCCG
ACACGTCTATTTCCCCCTGCTCCGGGCCGGCGCCTCGAAGATGACGGCCA
ACGTCACTGTCTTCGCCGTGTCCGCCTTCTTTCATGAGCTCCTGATATCG
GTAGGGAGGCAGGGCAGTAGCAGGGGCGGAGTGGAGAAGGGGAGGGAGCG
AGGGAGGGAGAGAGGGAGGGAAGACAAAAGGAGCCAGACGGATACCTTCT
CATGAATAACGGGGTCCTGGCCAGTAGATTTAATGACGTCCGGTGTCAAT
TTGAGAGAGGGATAAGCTACGTTGGGTAGGGCTTGAAAACGCGCGACTGG
GATCTAGGACAGAAACTTCTCCCTTCTTCCTCTCTCTCCCACCC
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protein sequence of rna7177

>rna7177-protein ID=rna7177-protein|Name=rna7177|organism=Nannochloropsis gaditana|type=polypeptide|length=88bp
MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRP
TTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSLI
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mRNA from alignment at CM002470.1:633095..634934-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7177 ID=rna7177|Name=rna7177|organism=Nannochloropsis gaditana|type=mRNA|length=1840bp|location=Sequence derived from alignment at CM002470.1:633095..634934- (Nannochloropsis gaditana)
ATCGCAAGTGGTGGTTGTGACGTGTACAATCCTGAAATGAAGCGGGCGCA
CGAATAAACCAACGAGACCGCTGGGACCATGCGCTGTTTTGGCGAGCCGA
TGCACAAAAATGACCTCCAGCTACTGTTGATCACGAAGTGCAATGCTGCC
GGCTGCTTTCATTACTCGTATGATGCAATGTTGAATCTTTATTTGTGCAG
GGCGACGTAGGCAGTACTTGAGCTTATCTACTTGTCACGCTCCCGTGGTT
AGGGAGCTGAATTGTAACTCTGAACAACACTACCAGACAAGCGACGGGTC
ATAAAGTCCCCGCCACTATCACCGCGTTGTTCCTCCCGTCCCAGCAACAA
GCGACATGAGTTTGACTATTTGCTAAAGCAGAGTGTAGCGCCTGCCTGAT
GTGTTCACACGTTCCCATACCTTCAAATCTTTCTACACTCCTGTCACGAC
AGCTTGAGCCATGGCCTTTCTAGCTGACGTTCAAAAGGAGGTGTGTGACG
GAGAAGTTCCAGCGTTGCCTTTGCGGTGGTGGGGGCTGTTCGCCGGCATT
CTAAATTTCTTTTTCTTCGGATGGGGTGAGTTACTATCAGACAATGCGAG
GTCGGAGGGTCATAGGGCAGCGGTGACGGGTCGTGGGCGGCTCATTGAAA
AGGCGTGATCGTCCTTACTTCACAATATGCCCGAGCAGGAACCATCCTGG
CCGGTGTCCGCAGTGATCGGCCCACCACGATCTTCATAGGGGTGCTGCAG
GTGAGAAAAGGCCCGAATTCCTGGGCGGGAGAACCGCCATGTCGGAAGCG
TCCTCGGTGTAGGCGCTGCTCCCGCCTCGCGTTGACGAGGTGGTCTCGCG
CTTTCTGATCGCTTTTTCCATTTTTCCTTCCCTTTGTTCTCATGCCAACT
CTCTCTTTATTCTCAATCCTCACGGTGACTCACTCTCCATTCAGTTCATC
CTTCCAGTGGTGGGGTGGATCTGGAGCATGGTGTGGGGATATCTGCTCAT
CAGGTTGGGAGGGAGGAAGGGAAGGAGAAAGGATGGACAGGGGACGGATG
CAGCAATGCCGGGAGGGGATGGGGGATGTTTGAGAAAGAGACGCGGGCAC
GTACAAAAGCACGAGTGGCGTCCAAGACATCATGATGCACCGGGAAGAAA
GGGAGCACACGCACTAGGACTTCCAAGTCGTCCATAGACTCACGCTTGGG
ATTCTGGAACCCCCCTCCCTTCTCCTCACTCCTGTCTCTTATGCTACCAC
AGTCGCGCTGAACAGTACAGCAGCTTGATTTGAGTCTTCTACAATCGCTG
TGACCTGCGAACTGCCAGCTTGTAGGCGCCTCATCCTGAATACCGCCCTT
CTGTGCAGGGGCGAGCCTGCGCTTTTACCTAGATAAACGTGCATGCTCCT
TCTTACGCTTTGCTTTCTTGGCAACTGTGGCGGAACAAGGGAGAGATTTA
GCGTTTTGAAATCGCTGCACTCAAAATAGAAGGGTTGTGGAATGCACTCG
TTTGCATTTATGTGGGAAGTGACACTGCGTTGCCCAGAGGTCGTGTTGGC
GAGGCCAGAAGGTCATTTTGAAATTTATATAGCACTTCAAGAGCTCTGTA
TTGCTCTTTGATAGCACGTTCTGTAATAAGTCGATATAATATGAGTTTGT
TGTTTTGGAATTCCTCACTGCGAGGAGAGGAAGTAACGGAGGGATGAAGA
CACAAAGTGGACTCCTGCGATTCTTAAAGGAGCATGGCTGAGGGAACAAA
AGCATGGTTGATGAACGGAAGTTGCGGACGACGTGACGCGTTTGTTCACG
GGTAGATTTTCTTTCCGCTAGGGCAAGACTCGATACCTCC
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Coding sequence (CDS) from alignment at CM002470.1:633095..634934-

>rna7177 ID=rna7177|Name=rna7177|organism=Nannochloropsis gaditana|type=CDS|length=1068bp|location=Sequence derived from alignment at CM002470.1:633095..634934- (Nannochloropsis gaditana)
TCGCGCTGAACAGTACAGCAGCTTGATTTGATTCATCCTTCCAGTGGTGG
GGTGGATCTGGAGCATGGTGTGGGGATATCTGCTCATCAGGAACCATCCT
GGCCGGTGTCCGCAGTGATCGGCCCACCACGATCTTCATAGGGGTGCTGC
AGATGGCCTTTCTAGCTGACGTTCAAAAGGAGGTGTGTGACGGAGAAGTT
CCAGCGTTGCCTTTGCGGTGGTGGGGGCTGTTCGCCGGCATTCTAAATTT
CTTTTTCTTCGGATGGGTCGCGCTGAACAGTACAGCAGCTTGATTTGATT
CATCCTTCCAGTGGTGGGGTGGATCTGGAGCATGGTGTGGGGATATCTGC
TCATCAGGAACCATCCTGGCCGGTGTCCGCAGTGATCGGCCCACCACGAT
CTTCATAGGGGTGCTGCAGATGGCCTTTCTAGCTGACGTTCAAAAGGAGG
TGTGTGACGGAGAAGTTCCAGCGTTGCCTTTGCGGTGGTGGGGGCTGTTC
GCCGGCATTCTAAATTTCTTTTTCTTCGGATGGGTCGCGCTGAACAGTAC
AGCAGCTTGATTTGATTCATCCTTCCAGTGGTGGGGTGGATCTGGAGCAT
GGTGTGGGGATATCTGCTCATCAGGAACCATCCTGGCCGGTGTCCGCAGT
GATCGGCCCACCACGATCTTCATAGGGGTGCTGCAGATGGCCTTTCTAGC
TGACGTTCAAAAGGAGGTGTGTGACGGAGAAGTTCCAGCGTTGCCTTTGC
GGTGGTGGGGGCTGTTCGCCGGCATTCTAAATTTCTTTTTCTTCGGATGG
GTCGCGCTGAACAGTACAGCAGCTTGATTTGATTCATCCTTCCAGTGGTG
GGGTGGATCTGGAGCATGGTGTGGGGATATCTGCTCATCAGGAACCATCC
TGGCCGGTGTCCGCAGTGATCGGCCCACCACGATCTTCATAGGGGTGCTG
CAGATGGCCTTTCTAGCTGACGTTCAAAAGGAGGTGTGTGACGGAGAAGT
TCCAGCGTTGCCTTTGCGGTGGTGGGGGCTGTTCGCCGGCATTCTAAATT
TCTTTTTCTTCGGATGGG
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Synonyms
Publications