EWM23513.1, cds7160 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|585104595|gb|EWM23513.1| (hypothetical protein Naga_100352g1 [Nannochloropsis gaditana]) HSP 1 Score: 176.022 bits (445), Expect = 8.115e-56 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 Query: 1 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSLI 88 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSLI Sbjct: 1 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSLI 88
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|553181651|ref|XP_005853602.1| (hypothetical protein NGA_0134302 [Nannochloropsis gaditana CCMP526] >gi|553191545|ref|XP_005855396.1| hypothetical protein NGA_0134301 [Nannochloropsis gaditana CCMP526] >gi|422293659|gb|EKU20959.1| hypothetical protein NGA_0134301 [Nannochloropsis gaditana CCMP526] >gi|422295458|gb|EKU22757.1| hypothetical protein NGA_0134302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 124.79 bits (312), Expect = 1.704e-35 Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0 Query: 1 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPV 64 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQ P+ Sbjct: 1 MAFLADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQIFFPL 64
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|1103665148|emb|CRG95341.1| (conserved Plasmodium protein, unknown function [Plasmodium gallinaceum]) HSP 1 Score: 66.6254 bits (161), Expect = 1.178e-12 Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 0 Query: 4 LADVQKEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQ 83 ++ + ++ + EVP + G+LN FFFG G I+ G+ + + IG+LQFI P+VGWIW+++WG L+I R + Sbjct: 1 MSTIINKISNLEVPENGNSSVNIILGVLNIFFFGMGMIILGIINKDIDDLIIGILQFITPIVGWIWAIIWGVLIIIRNAK 80
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|675225098|emb|CDS45009.1| (conserved Plasmodium protein, unknown function [Plasmodium berghei ANKA] >gi|991454298|emb|CXI02013.1| conserved Plasmodium protein, unknown function [Plasmodium berghei] >gi|1061780913|emb|SCL91907.1| conserved Plasmodium protein, unknown function [Plasmodium berghei] >gi|1063415228|emb|SCN22574.1| conserved Plasmodium protein, unknown function [Plasmodium berghei] >gi|1068928417|emb|SCM15554.1| conserved Plasmodium protein, unknown function [Plasmodium berghei] >gi|1068933047|emb|SCM17346.1| conserved Plasmodium protein, unknown function [Plasmodium berghei]) HSP 1 Score: 62.3882 bits (150), Expect = 4.571e-11 Identity = 28/75 (37.33%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 9 KEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQ 83 ++ + EVP + G++N FFFG+G I G+ + P + IG+LQ +P+VGWIWS++WG L+I + + Sbjct: 7 DKIRNMEVPENGNSSINVMLGVINIFFFGFGMIAIGILNKDPDDLIIGILQLFVPLVGWIWSILWGILIIIKNSK 81
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|675230732|emb|CDU16498.1| (conserved Plasmodium protein, unknown function [Plasmodium yoelii] >gi|675235940|emb|CDZ11022.1| conserved Plasmodium protein, unknown function [Plasmodium yoelii]) HSP 1 Score: 62.3882 bits (150), Expect = 4.880e-11 Identity = 27/75 (36.00%), Postives = 47/75 (62.67%), Query Frame = 0 Query: 9 KEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQ 83 ++ + EVP + G++N FFFG+G I G+ + P + IG+LQ ++P+VGWIW+++WG L+I + + Sbjct: 7 DKIRNMEVPEDGNNSINVMLGVINIFFFGFGMIAIGIINKDPDDLIIGILQLLVPLVGWIWAILWGILIIIKNSK 81
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|564277756|gb|ETB59176.1| (hypothetical protein YYC_03428 [Plasmodium yoelii 17X]) HSP 1 Score: 63.1586 bits (152), Expect = 5.276e-11 Identity = 27/78 (34.62%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 10 EVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSL 87 ++ + EVP + G++N FFFG+G I G+ + P + IG+LQ ++P+VGWIW+++W L R +Y+++ Sbjct: 8 KIRNMEVPEDGNNSINVMLGVINIFFFGFGMIAIGIINKDPDDLIIGILQLLVPLVGWIWAILWDISLKGRTSKYTNI 85
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|1008950858|gb|KYK68147.1| (putative transmembrane protein [Toxoplasma gondii TgCatPRC2]) HSP 1 Score: 62.003 bits (149), Expect = 1.040e-10 Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 0 Query: 5 ADVQKEVCDGEVPALPL---RWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQYSSLI 88 +DV + + VP P + + GILN FFFG G I+ G + IGVLQ +LP+VGWIW++VWG +++ R+ SS I Sbjct: 4 SDVFQRILHFRVPEPPSPKDKAAYILLGILNCFFFGLGMIIIGFMQSDVVNMMIGVLQLLLPIVGWIWAVVWGVMIVVRSIVPSSNI 90
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|70951844|ref|XP_745131.1| (conserved Plasmodium protein, unknown function [Plasmodium chabaudi chabaudi] >gi|56525356|emb|CAH80249.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] >gi|675219175|emb|CDR11280.1| conserved Plasmodium protein, unknown function [Plasmodium chabaudi chabaudi] >gi|1061785941|emb|SCL98312.1| conserved Plasmodium protein, unknown function [Plasmodium chabaudi chabaudi]) HSP 1 Score: 61.6178 bits (148), Expect = 1.167e-10 Identity = 26/75 (34.67%), Postives = 47/75 (62.67%), Query Frame = 0 Query: 9 KEVCDGEVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRAEQ 83 ++ + EVP + G++N FFFG+G I G+ + P + IG+LQ ++P+VGWIW+++WG L++ + + Sbjct: 7 DKIRNMEVPENGNSSINVMLGVVNIFFFGFGMIAIGILNKDPDDLIIGILQLLVPLVGWIWAILWGILIVIKNSK 81
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|557733968|gb|ESS30095.1| (putative transmembrane protein [Toxoplasma gondii VEG] >gi|672261842|gb|KFG36183.1| putative transmembrane protein [Toxoplasma gondii p89] >gi|672268632|gb|KFG41638.1| putative transmembrane protein [Toxoplasma gondii GAB2-2007-GAL-DOM2]) HSP 1 Score: 61.6178 bits (148), Expect = 1.425e-10 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0 Query: 15 EVPALPLRWWGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRA----EQYSS 86 E P+ R F G+LN F FG G I+ G + + + IGVLQ +LP+VGWIW++VWG L++ +A +YSS Sbjct: 17 EPPSSKDRVAYSFLGLLNCFIFGLGVIILGFIENDVSNMMIGVLQLLLPIVGWIWALVWGVLIVLKAVLKDTEYSS 92
BLAST of EWM23513.1 vs. NCBI_GenBank
Match: gi|675128630|ref|XP_008886202.1| (hypothetical protein HHA_222260 [Hammondia hammondi] >gi|661334947|gb|KEP63088.1| hypothetical protein HHA_222260 [Hammondia hammondi]) HSP 1 Score: 61.6178 bits (148), Expect = 1.642e-10 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 4 LADVQKEVCDGEVPALPLRW----WGLFAGILNFFFFGWGTILAGVRSDRPTTIFIGVLQFILPVVGWIWSMVWGYLLISRA 81 L++V + VP P +GL G+LN FFFG G I+ G + + + IGVLQ +LP+VGWIW++VWG L++ +A Sbjct: 3 LSEVGQRALHLRVPEPPSSKDRVAYGLL-GLLNCFFFGLGVIILGFIENDVSNMMIGVLQLLLPIVGWIWALVWGVLIVLKA 83 The following BLAST results are available for this feature:
BLAST of EWM23513.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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