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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101309g1.10250.mrna |
| Orig protein id | gnl|cribi|Naga_101309g1.10250 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:608369..609892 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7169 ID=rna7169|Name=rna7169|organism=Nannochloropsis gaditana|type=mRNA|length=517bp
TGCGTGCGTGTATGGTAGCGGAGTGTCGCCATGGGAAGGCAGTGGGTTCC
AATTTTGTGTCTTTTCTTTAAAAATGGTTTTGGGGTCCCTGTGACCGCCG
CGGGCGAGAAGCTGATCCGGTGCCGCTCTCTGTCTTTTTACCCTCACCCA
TCTTGCCGTCCTCTGCCGATTTATTCATGCACCCACCCACCCAACCGGTC
CAATCCCGTGCACAGACGCATTTGAGAGCATGCCTGGGTTCTCCCTCCGC
TCCCAGGACGCGTGGCGTAATCACCCCATGCTGGCTTCGGGCTTCAAACG
ACCCATCCCTAATTTCACCTTGGCCTGCGGGATTTTTCTCGGTCTCGTGG
CAGTGGACTGGGCGAACAAGGCAATAAATGGCGATGGCCATCACCACGCG
AATCCAGTCTCTGTGACATTCGTGGACGATATCGACGGACCTTCCACGAC
GGTGATAGAAGAGAGCAAGGGAAGTCATGGTGCCCGCCATTGAGGGGAAG
GAGGGAGGGAGGGAGGG back to topprotein sequence of rna7169 >rna7169-protein ID=rna7169-protein|Name=rna7169|organism=Nannochloropsis gaditana|type=polypeptide|length=441bp
LSSSSSSLAWPASSTLLPPSLLQYLHAILASKRERPEVEGEGGREGKDGF
EGQGEGEDGGEEGLEGRMQALPLPGARHGLSHPYQAVNEQQDDRGLQTRE
GYPSHACPPSLPPSLPPSPSLSTSSLSHLSHRLLPRRLSGGGDEGGKEDG
GEGGREGGREGHSTAGTTSSLSQYNPLPYLLPSLSRHGTLHSSGASTSSS
SQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFV
KESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHV
AGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEANAREGGGE
EDGGKEGKEKKEGPRRGRGEGGTAEHPHRVPSQPRHNRQRGRESVSVLEG
GREKGGSVGSAPTEFPQARAPEGEGREGRGVTGITRSLSTT back to topmRNA from alignment at CM002470.1:608369..609892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7169 ID=rna7169|Name=rna7169|organism=Nannochloropsis gaditana|type=mRNA|length=1524bp|location=Sequence derived from alignment at CM002470.1:608369..609892+ (Nannochloropsis gaditana)
ctctcctcctcctcctcctccttagCCTGGCCTgcgtcttccaccctcct
ccctccctccctcctccagtaCTTGCATGCAATCCTGGCgtccaagaggg
agaggcccgaggtcgagggcgagggagggagggaggggaaggatggattc
gaggggcagggagagggcgaggacgggggggaggaagggttaGAGGGCAG
GAtgcaagccctccctctgcccggGGCCCGCCATGGCCTCTCCCATCCTT
ATCAGGCGGTGAACGAGCAGCAGGACGATAGAGGCCTCCAGACCCGCGAG
GGTtatccctcccacgcctgccctccctccctccctccctccctccctcc
ctcgccctccctctcgacctcctccttgtcacaCTTgagccaccgcctcc
ttccccgccgtctttctggaggcggagatgagggtgggaaggaggacggg
ggggagggcgggagggagggcgggagggaggggcactCCACCGCCGGCAC
AACGTCCTCGCTGTCGCAGTACAACCCGTtgccctacctccttccctccc
tttcccgtcaTGGCACTCTCCACTCAAgcggcgcctccaccagctcttcc
tctcagGCCccaaaccctccctccctccctccctccctccctccctcctt
ctccccccatccccgcaCCTTCGTGGAGCTCTCGCCTCTTTCCTACCTTC
CGGGGAGCTTTGTCAAGAAACATCTGGGCATGGTCTCACTCCATTTCGTG
AAAGAAAGCAGTTTGACGGCCGTGGCGGtcgggagcgggggagggagcgg
gggagggcgggagggagggaggggagggaggggtgtgACGCTGGGAACCT
TGTTGCAGGTGTTTCTGGTGGAAGTGAACGCCATGGTTAGGGCCCACGTT
GCGGGTCTGGGGGGCAATGCTCTCTTGTCCTATCGATTGGTCActcaaga
aaggggagggagggtctaCCGAAGCACCACGTACCACATGGTTAGCGTGA
GTGGCGATGCGGTCAGGGTGGAGGCGAATgccagggaaggagggggggag
gaggacggagggaaggaggggaaggagaagaaggaaggaccaagaagagg
aagaggtgaagGGGGGACAGCGGAGCACCCACATCGCGTACCGTCACAAC
CGAGGCACAACCGGCAAAGGGGGCGGGAGTCCGTTTCagtcctggaggga
gggcgggagaaaggaggcagcgTGGGCAGTGCACCGACCGAGTTCCCGCA
GGCCCGTGCGCCGGAGGGtgagggccgggagggaagaggggtgaCAGGCA
TAACGCGGAGCCTTTCCACCACGTGAAATAGGATTGGCCGCGCGCGGTCA
CCGCGGTAGCTAGGGGGATAGCGAGTCGCTCTGGCGCCTGTTCGAGGCTG
TGGGAGCGACCACTTTGCGGGGTCTCCCACTGCTTTGGTACGTGTCGTGG
TTGCAAAGGAGCTGTACCGGGGGCGAAGGACCAAGGACGCAGGGCCTGTA
AAATGAAAAGCAAATCTTGGGAGG back to topCoding sequence (CDS) from alignment at CM002470.1:608369..609892+ >rna7169 ID=rna7169|Name=rna7169|organism=Nannochloropsis gaditana|type=CDS|length=1326bp|location=Sequence derived from alignment at CM002470.1:608369..609892+ (Nannochloropsis gaditana)
ctctcctcctcctcctcctccttagCCTGGCCTgcgtcttccaccctcct
ccctccctccctcctccagtaCTTGCATGCAATCCTGGCgtccaagaggg
agaggcccgaggtcgagggcgagggagggagggaggggaaggatggattc
gaggggcagggagagggcgaggacgggggggaggaagggttaGAGGGCAG
GAtgcaagccctccctctgcccggGGCCCGCCATGGCCTCTCCCATCCTT
ATCAGGCGGTGAACGAGCAGCAGGACGATAGAGGCCTCCAGACCCGCGAG
GGTtatccctcccacgcctgccctccctccctccctccctccctccctcc
ctcgccctccctctcgacctcctccttgtcacaCTTgagccaccgcctcc
ttccccgccgtctttctggaggcggagatgagggtgggaaggaggacggg
ggggagggcgggagggagggcgggagggaggggcactCCACCGCCGGCAC
AACGTCCTCGCTGTCGCAGTACAACCCGTtgccctacctccttccctccc
tttcccgtcaTGGCACTCTCCACTCAAgcggcgcctccaccagctcttcc
tctcagGCCccaaaccctccctccctccctccctccctccctccctcctt
ctccccccatccccgcaCCTTCGTGGAGCTCTCGCCTCTTTCCTACCTTC
CGGGGAGCTTTGTCAAGAAACATCTGGGCATGGTCTCACTCCATTTCGTG
AAAGAAAGCAGTTTGACGGCCGTGGCGGtcgggagcgggggagggagcgg
gggagggcgggagggagggaggggagggaggggtgtgACGCTGGGAACCT
TGTTGCAGGTGTTTCTGGTGGAAGTGAACGCCATGGTTAGGGCCCACGTT
GCGGGTCTGGGGGGCAATGCTCTCTTGTCCTATCGATTGGTCActcaaga
aaggggagggagggtctaCCGAAGCACCACGTACCACATGGTTAGCGTGA
GTGGCGATGCGGTCAGGGTGGAGGCGAATgccagggaaggagggggggag
gaggacggagggaaggaggggaaggagaagaaggaaggaccaagaagagg
aagaggtgaagGGGGGACAGCGGAGCACCCACATCGCGTACCGTCACAAC
CGAGGCACAACCGGCAAAGGGGGCGGGAGTCCGTTTCagtcctggaggga
gggcgggagaaaggaggcagcgTGGGCAGTGCACCGACCGAGTTCCCGCA
GGCCCGTGCGCCGGAGGGtgagggccgggagggaagaggggtgaCAGGCA
TAACGCGGAGCCTTTCCACCACGTGA back to top
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