EWM23521.1, cds7152 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|585104614|gb|EWM23521.1| (hypothetical protein Naga_101309g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 847.81 bits (2189), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0 Query: 1 LSSSSSSLAWPASSTLLPPSLLQYLHAILASKRERPEVEGEGGREGKDGFEGQGEGEDGGEEGLEGRMQALPLPGARHGLSHPYQAVNEQQDDRGLQTREGYPSHACPPSLPPSLPPSPSLSTSSLSHLSHRLLPRRLSGGGDEGGKEDGGEGGREGGREGHSTAGTTSSLSQYNPLPYLLPSLSRHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEANAREGGGEEDGGKEGKEKKEGPRRGRGEGGTAEHPHRVPSQPRHNRQRGRESVSVLEGGREKGGSVGSAPTEFPQARAPEGEGREGRGVTGITRSLSTT 441 LSSSSSSLAWPASSTLLPPSLLQYLHAILASKRERPEVEGEGGREGKDGFEGQGEGEDGGEEGLEGRMQALPLPGARHGLSHPYQAVNEQQDDRGLQTREGYPSHACPPSLPPSLPPSPSLSTSSLSHLSHRLLPRRLSGGGDEGGKEDGGEGGREGGREGHSTAGTTSSLSQYNPLPYLLPSLSRHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEANAREGGGEEDGGKEGKEKKEGPRRGRGEGGTAEHPHRVPSQPRHNRQRGRESVSVLEGGREKGGSVGSAPTEFPQARAPEGEGREGRGVTGITRSLSTT Sbjct: 1 LSSSSSSLAWPASSTLLPPSLLQYLHAILASKRERPEVEGEGGREGKDGFEGQGEGEDGGEEGLEGRMQALPLPGARHGLSHPYQAVNEQQDDRGLQTREGYPSHACPPSLPPSLPPSPSLSTSSLSHLSHRLLPRRLSGGGDEGGKEDGGEGGREGGREGHSTAGTTSSLSQYNPLPYLLPSLSRHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEANAREGGGEEDGGKEGKEKKEGPRRGRGEGGTAEHPHRVPSQPRHNRQRGRESVSVLEGGREKGGSVGSAPTEFPQARAPEGEGREGRGVTGITRSLSTT 441
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|698809354|ref|XP_009837706.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574107407|gb|ETV72920.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 106.686 bits (265), Expect = 6.989e-21 Identity = 62/157 (39.49%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 185 SRHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 S H +L +SS + P PS + PH R ++EL+PLSY+PG+ + ++LG ++LHF+KES V GG LG +FL E ++VRAHV LGGNA+LS+RLV E ++YR+ Y+M+SV+GDAV +E Sbjct: 885 SDHSSLRLQILQNASSFRPPQSPS--ADIAAFIGPHAREWIELTPLSYVPGAKILRYLGRITLHFIKESW----TVRECGG---------------LGAFFHLFLSEAISVVRAHVRALGGNAMLSFRLVPIE-SSQLYRNQVYNMISVTGDAVLLE 1019
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|298705587|emb|CBJ28838.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 105.531 bits (262), Expect = 1.457e-20 Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 0 Query: 223 TFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEAN 343 VE++PL +PG+ V ++LG VSLHF+KES RGG + + F++EV+A++RA+VA LGGNALLSYRL+ QE GG+VY++ Y+M+SV GDAV VE + Sbjct: 1190 IMVEMTPLGRIPGARVIRYLGSVSLHFIKES----------------WAASRGGE---VASFFHEFVMEVHAVLRANVAALGGNALLSYRLLPQESGGKVYKNQVYNMISVRGDAVVVEYD 1291
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|953490384|emb|CEG46609.1| (Predicted Ca2-dependent phospholipid-binding protein [Plasmopara halstedii]) HSP 1 Score: 103.605 bits (257), Expect = 6.713e-20 Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = 0 Query: 215 PSFS-PHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEANAREGG 348 P+FS P+ R ++EL+PL Y+PG+ V ++LG V+LHF+KES V GG LG +FL E A+VRAHV LGGNA+L++RLV E ++YR+ Y+M+S++GD V +E REGG Sbjct: 976 PAFSAPYGREWIELTPLGYIPGAHVTRYLGRVTLHFIKESW----TVRESGG---------------LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIE-SSQLYRNQVYNMISITGDVVMIE---REGG 1087
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|301112709|ref|XP_002998125.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112419|gb|EEY70471.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 102.449 bits (254), Expect = 7.480e-20 Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = 0 Query: 187 HGTLHSSGASTSSSSQAPNPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 H +H + + + + S P P ++P +P+ R ++EL+PL Y+PG+ V ++LG V+LHF+KES V GG LG +FL E A+VRAHV LGGNA+L++RLV E ++YR+ Y+M+S++GD V +E Sbjct: 370 HIHMHRTRSFSHNRSNNPMMPGTTAAIP---APYGREWIELTPLGYIPGAHVTRYLGRVTLHFIKESW----TVRESGG---------------LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIE-SSQLYRNQVYNMISITGDVVMIE 501
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|673038534|ref|XP_008873228.1| (hypothetical protein H310_09046 [Aphanomyces invadans] >gi|574471345|gb|ETV98353.1| hypothetical protein H310_09046 [Aphanomyces invadans]) HSP 1 Score: 103.219 bits (256), Expect = 7.754e-20 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0 Query: 186 RHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFS-PHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 R LH+ AS S P PS+ + +F P+ R ++EL+PLSY+PG+ + ++LG ++LHF+KES V GG LG +FL E ++VRAHV LGGNA+LS+RLV E ++YR+ Y+M+SV+GDAV +E Sbjct: 909 RLQILHN--ASAFSQVAPPMSPSVDAAATAAFVGPNAREWIELTPLSYVPGAKILRYLGRITLHFIKESW----TVRECGG---------------LGAFFHLFLSEAISVVRAHVRALGGNAMLSFRLVPIE-SSQLYRNQVYNMISVTGDAVLLE 1043
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|673038536|ref|XP_008873229.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574471346|gb|ETV98354.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 103.219 bits (256), Expect = 7.965e-20 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 0 Query: 186 RHGTLHSSGASTSSSSQAPNPPSLPPSLPPSFS-PHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 R LH+ AS S P PS+ + +F P+ R ++EL+PLSY+PG+ + ++LG ++LHF+KES V GG LG +FL E ++VRAHV LGGNA+LS+RLV E ++YR+ Y+M+SV+GDAV +E Sbjct: 908 RLQILHN--ASAFSQVAPPMSPSVDAAATAAFVGPNAREWIELTPLSYVPGAKILRYLGRITLHFIKESW----TVRECGG---------------LGAFFHLFLSEAISVVRAHVRALGGNAMLSFRLVPIE-SSQLYRNQVYNMISVTGDAVLLE 1042
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|301112701|ref|XP_002998121.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112415|gb|EEY70467.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 101.679 bits (252), Expect = 2.645e-19 Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 0 Query: 205 NPPSLPPSLPPSFSPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 N P +P + +P+ R ++EL+PL Y+PG+ V ++LG V+LHF+KES V GG LG +FL E A+VRAHV LGGNA+L++RLV E ++YR+ Y+M+S++GD V +E Sbjct: 907 NNPMMPGTTAAIPAPYVREWIELTPLGYIPGAHVTRYLGRVTLHFIKESW----TVRESGG---------------LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIE-SSQLYRNQVYNMISITGDVVMIE 1023
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|1173946045|gb|OQR94613.1| (hypothetical protein ACHHYP_01091 [Achlya hypogyna]) HSP 1 Score: 99.3673 bits (246), Expect = 1.494e-18 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 0 Query: 202 QAPNPPSLPPSLP--PSFSPHP---------RTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVEAN 343 QAP + P + P P S HP R ++EL+PLSY+PGS + ++LG ++LHF+KES V GG LG +FL E A+VRAHV LGGNA+LS+RLV E ++YR+ Y+M+SV+GDAV +E + Sbjct: 904 QAPTSVASPTARPTSPLASGHPNPFHQSSSAREWIELTPLSYVPGSKILRYLGRITLHFIKESW----TVRELGG---------------LGAFFHLFLSEAIAVVRAHVRALGGNAMLSFRLVPIE-SSQLYRNQVYNMISVTGDAVLLERD 1036
BLAST of EWM23521.1 vs. NCBI_GenBank
Match: gi|970652120|gb|KUF90839.1| (Amino Acid-Polyamine-Organocation (APC) Family [Phytophthora nicotianae]) HSP 1 Score: 98.9821 bits (245), Expect = 1.644e-18 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 0 Query: 218 SPHPRTFVELSPLSYLPGSFVKKHLGMVSLHFVKESSLTAVAVGSGGGSGGGREGGRGGRGVTLGTLLQVFLVEVNAMVRAHVAGLGGNALLSYRLVTQERGGRVYRSTTYHMVSVSGDAVRVE 341 +P+ R ++EL+PL Y+PG+ V ++LG V+LHF+KES V GG LG +FL E A+VRAHV LGGNA+L++RLV E ++YR+ Y+M+S++GD V +E Sbjct: 593 APYGREWIELTPLGYIPGAHVTRYLGRVTLHFIKESW----TVRESGG---------------LGAFYHLFLSEAIAIVRAHVRSLGGNAMLTFRLVPIE-SSQLYRNQVYNMISITGDVVMIE 696 The following BLAST results are available for this feature:
BLAST of EWM23521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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