rna7168, rna7168 (mRNA) Nannochloropsis gaditana

Overview
Namerna7168
Unique Namerna7168
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length595
Alignment locationCM002470.1:604991..605687 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101879g1.5177.mrna
Orig protein idgnl|cribi|Naga_101879g1.5177
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:604991..605687 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101879g1gene6930Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7168rna7168-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23522.1cds7151Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7168 ID=rna7168|Name=rna7168|organism=Nannochloropsis gaditana|type=mRNA|length=595bp
AAAGCAAGTTGCTTGTCCGGGGTCTTGGCTTGCAGTGGTTGATGCGACAG
GCAGATATTGCTATGTTTGGCCTGAAAAGCGTGCGGGTGACTTGGTTCTT
GCGCCTATTGCTCCCTCCCAGGCCGTAGTCCGACGTACCCCCTTCCTCCC
TTCTTGCCTACCGTCCCCCTCCTTCCCCCTCCTTCCCCCCTAAGACTCCA
TGGCCGCTCACCGCCTCACCAACAAAGTTCTCGACCTGTGGAAGGCAAGA
AAACCAGCCGTCACTGCCTGGATGGGCATTGGGTCGCCCTACACGGCCGA
GGCGTTGGCACGGCAAGGTTTCGACGCCTGTGTCGTGGACTTGCAGCATG
GGATGGTGGACGAGGGTACGGTTATCCAAATGTTCGCCGCCATCGCCACG
GTGCCAGGTGTCACCCCTTTGGCCCGCGTCCGCTGCAATCAACCCGACAA
AATCCACTTTTTATTGGATGCCGGGGCTTTGGGCGTCATCTGTCCCCTCA
TCAACACCGCTCAGGAGGTTCGGGACTTCGTAGCCGCCTGTAGGTACCCC
CCGCAGGGGCGACGAAGCTATGGGCCGGGCCGAGGGGCGTTCGCA
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protein sequence of rna7168

>rna7168-protein ID=rna7168-protein|Name=rna7168|organism=Nannochloropsis gaditana|type=polypeptide|length=87bp
MPGFSLRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAIN
GDGHHHANPVSVTFVDDIDGPSTTVIEESKGSHGARH
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mRNA from alignment at CM002470.1:604991..605687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7168 ID=rna7168|Name=rna7168|organism=Nannochloropsis gaditana|type=mRNA|length=697bp|location=Sequence derived from alignment at CM002470.1:604991..605687- (Nannochloropsis gaditana)
TGCGTGCGTGTATGGTAGCGGAGTGTCGCCATGGGAAGGCAGTGGGTTCC
AATTTTGTGTCTTTTCTTTAAAAATGGTTTTGGGGTCCCTGTGACCGCCG
CGGGCGAGAAGCTGATCCGGTGCCGCTCTCTGTCTTTTTACCCTCACCCA
TCTTGCCGTCCTCTGCCGATTTATTCATGCACCCACCCACCCAACCGGTC
CAATCCCGTGCACAGACGCATTTGAGAGCATGCCTGGGTTCTCCCTCCGC
TCCCAGGACGCGTGGCGTAATCACCCCATGCTGGCTTCGGGCTTCAAACG
ACCCATCCCTAATTTCACCTTGGCCTGCGGGATTTTTCTCGGTCTCGTGG
CAGTGGACTGGGCGAACAAGGCAATAAATGGTACGAACAAGCTTTGCACG
AGGGTCAAGTCGAGCTTTCGTGGGCTCAGTGGGAGGAGTCAGAGCTGGTG
GAGGGTTACTACGGGAGCAAGCGCGCGTTTCCCCCCGTGCACGTACACCT
CCTCCCTTCTTTCATACCCCTTTCCATCCTTTCCCGGCATTACTTCCCTC
CCGACTCCAGGCGATGGCCATCACCACGCGAATCCAGTCTCTGTGACATT
CGTGGACGATATCGACGGACCTTCCACGACGGTGATAGAAGAGAGCAAGG
GAAGTCATGGTGCCCGCCATTGAGGGGAAGGAGGGAGGGAGGGAGGG
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Coding sequence (CDS) from alignment at CM002470.1:604991..605687-

>rna7168 ID=rna7168|Name=rna7168|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at CM002470.1:604991..605687- (Nannochloropsis gaditana)
GCGATGGCCATCACCACGCGAATCCAGTCTCTGTGACATTCGTGGACGAT
ATCGACGGACCTTCCACGACGGTGATAGAAGAGAGCAAGGGAAGTCATGG
TGCCCGCCATTGAATGCCTGGGTTCTCCCTCCGCTCCCAGGACGCGTGGC
GTAATCACCCCATGCTGGCTTCGGGCTTCAAACGACCCATCCCTAATTTC
ACCTTGGCCTGCGGGATTTTTCTCGGTCTCGTGGCAGTGGACTGGGCGAA
CAAGGCAATAAATGGCGATGGCCATCACCACGCGAATCCAGTCTCTGTGA
CATTCGTGGACGATATCGACGGACCTTCCACGACGGTGATAGAAGAGAGC
AAGGGAAGTCATGGTGCCCGCCATTGAATGCCTGGGTTCTCCCTCCGCTC
CCAGGACGCGTGGCGTAATCACCCCATGCTGGCTTCGGGCTTCAAACGAC
CCATCCCTAATTTCACCTTGGCCTGCGGGATTTTTCTCGGTCTCGTGGCA
GTGGACTGGGCGAACAAGGCAATAAATG
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Synonyms
Publications