EWM23522.1, cds7151 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23522.1 vs. NCBI_GenBank
Match: gi|553186188|ref|XP_005854375.1| (hypothetical protein NGA_0222900 [Nannochloropsis gaditana CCMP526] >gi|422294681|gb|EKU21981.1| hypothetical protein NGA_0222900 [Nannochloropsis gaditana CCMP526] >gi|585104618|gb|EWM23522.1| hypothetical protein Naga_101879g1 [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 4.097e-58 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
Query: 1 MPGFSLRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDDIDGPSTTVIEESKGSHGARH 87
MPGFSLRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDDIDGPSTTVIEESKGSHGARH
Sbjct: 1 MPGFSLRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDDIDGPSTTVIEESKGSHGARH 87
BLAST of EWM23522.1 vs. NCBI_GenBank
Match: gi|1173950685|gb|OQR98634.1| (hypothetical protein ACHHYP_08332 [Achlya hypogyna]) HSP 1 Score: 54.299 bits (129), Expect = 5.342e-8 Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 0
Query: 6 LRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDD 67
L QDAWR HP L + K+P+P +A GIF V A AI G GHH A+ +VT+V +
Sbjct: 3 LAHQDAWRKHPFLTNCTKKPLPGLGIAAGIF----GVYLAVGAITGSGHHDAHHANVTYVKE 60
BLAST of EWM23522.1 vs. NCBI_GenBank
Match: gi|673039203|ref|XP_008873562.1| (hypothetical protein H310_09302 [Aphanomyces invadans] >gi|574470992|gb|ETV98001.1| hypothetical protein H310_09302 [Aphanomyces invadans]) HSP 1 Score: 53.5286 bits (127), Expect = 1.406e-7 Identity = 26/65 (40.00%), Postives = 34/65 (52.31%), Query Frame = 0
Query: 6 LRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDDIDG 70
L QDAWR+HP L K+P+P F +A GIF + VD N H HA+ V +V + G
Sbjct: 3 LAGQDAWRSHPFLTGCIKKPVPGFGMAAGIFAVYLTVDTIANLGNKTSHSHAHHAPVVYVKEEIG 67
BLAST of EWM23522.1 vs. NCBI_GenBank
Match: gi|669149946|ref|XP_008610535.1| (hypothetical protein SDRG_06532 [Saprolegnia diclina VS20] >gi|530737531|gb|EQC35773.1| hypothetical protein SDRG_06532 [Saprolegnia diclina VS20]) HSP 1 Score: 52.7582 bits (125), Expect = 2.491e-7 Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 0
Query: 6 LRSQDAWRNHPMLASGFKRPIPNFTLACGIFLGLVAVDWANKAINGDGHHHANPVSVTFVDDIDG 70
L QDAWR HP L++ K+P+P F +A GIF +A+ + N HHA SVT+V + G
Sbjct: 3 LAHQDAWRKHPFLSNCTKKPLPGFVIAVGIFSAYLAIGAVTGSGNSHAGHHA---SVTYVKEEIG 64 The following BLAST results are available for this feature:
BLAST of EWM23522.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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