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Properties
| Property Name | Value |
|---|
| Product | er degradation-enhancing alpha-mannosidase-like protein |
| Orig transcript id | gnl|cribi|Naga_101044g2.3110.mrna |
| Orig protein id | gnl|cribi|Naga_101044g2.3110 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:573012..574383 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7152 ID=rna7152|Name=rna7152|organism=Nannochloropsis gaditana|type=mRNA|length=2141bp
AAATGGGCGCGTGGGTGACATTACTGCGAGTCTTCCGAGGCACCGTCCGC
GATCAGGAGGCCCTCCTTTCCTCCCTCCCTCCCTCCCTCCTTCCCTCCAT
CCCTCCCTCCCTCCCTCCTTCCTTCCCGCCCTCCGTCAAGGAGGAGGCAG
AGGCCCACGCCTCGAAGCGTCGAAGGATGATGAGCACAGACGAGGAAGGG
GGAAGTCACGGTCATCACCCGAATGTCATGCCTCCTGGCCTCCCTGCCTC
GACCCCGCCCTCTCTCCCTCCCTCCGTCGGCACCTCCCCCTGGGCCCGCT
ACCAGCTGGCCCGCGAAGCACTCCTCCTGGGGTACTTCCCCCTCGCCCAC
CGCCTCCTCCTTCCCTTCCTCCCTCCCTCCCTCTCCCTCTCCTCCGAGAG
GACCCAGGAATGGCTGGGCGCCCTGGCATCCATCAGCAAGGCCGAGACCC
TCTTCGGCGCCTCCGCCGCTTCCTGCCTCCCGCCCTCCTCCCCTCCCTCC
ACCCCTCCTTCCCTCCCTTCCTCAGAGCGGGACGTCTGCGACGAAGATGT
GGTGCGACCCACCCTGCGTCATGCCCTCCTCCTCTTGCAACACCTGGAAC
GGCTGCCCTCCTCCCCTTCCTCCTTCCCGTTCTCCTTCCCTTCCTTCCCC
CGCCGCTACCTTCTGGCTCGACTCCACTTCCTCTCCCTCTTAACCTTCCT
CCGGACACTTCTTCGTGAACGCTATCTCCTCCCTCCCCTCCCTCCTTACC
ACCTCCACTCCCGCGCCGACCGGTACCACAGCCGTTTCCCCCGGGCCTGC
CAACGGCTGGAGGGACGTATGTGGCGGCTGTATCGGGAGGAAGGAGGGGG
AGATCCTCAGTCCCGATGGTGCCTGCGGATAGTCATGGGTATGGTTCGAT
TCCTGGAACGGGTCTACCGGGTCCTAGTCATGGGCGAGAAGGAGGGCGAA
GGAGGGAGGGAAGCAGGAAGGGAGGGAGACAGGGAAGGAGGGAAGGGAGG
CAGGAGGAAAAACCCGCACTGGCCGAGCGGGAATCTCCCTTCCGCTGCTT
CCTGCCCGATGTTGCACGCCTGCCGCCATCTGGAAAAGCAGTTCGAGCAA
ATTGCCCTTCCTCCCGCCCTCCCTCCCGCCCTCCCCCTCGCCCTCCGTCA
CATGGCGCAAATCGAGCTGTCGCTCGCTCAAATACCGTGGCCCTACCCGC
GACGCTTCCTGTACCCTCGCTCCCTTCCTCCCTGGTCCCTGGACATGTAC
GTTTTCCCTGTGGACCCGGAGGATGACGAGGAAGAAGGAGAGAAGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAATTGAGTGGCCCGAAG
GGCGGGGGAGGATCTGGGAGGCAGGAGGAGGCGAGGAGGAGGTTGAATGG
AGGAAAGACAATGACCGAGTGGAGGTGGAGTACGGGGAAGAGATCCGTTT
GGCGGTGGTAGGAATCTTGCGGCATGTGCCACCTGGCGCGAGAGGGGGTC
TGGCAACCGTGCGGGTGCTGGTCTCGGTGACGGACGTGGAGGACGGGGCG
GTGGGGGAAGGAGAGGGGGGAGAGGGGGACGTGGACAAGGGTTCCACGCA
GGGCATGACGCAAGGGCAGCCAGATCCGCCGCGTCGGTATACTGCGCCTT
GTCTGTCTCAGCCTCGCCCCCAAACCGGGGAGCGGTTTTGTTTCCGTGCA
CTCCTTACCAGCCCCTTGGACAAGGAGGACGGGACGTTTCCAGCCTGTGT
CTTGACCCTTCCAAGAGGAGTTCTGCCCCGACGGGGTATGTATACCTTGC
TCTTGGAGGGAAGAGTCCTGGATGCGGGGGGGCGGGCTTGGACGATGACG
CCCGAGGGAGGAGGGGGGAAGAGGAAAATAAGCTTGATCTGTGGCGTGGA
TGGAGGGTGGTGAAGGGGATGAGGATTCAAATCCTGCTACACGTGTGCGA
GGAGAGAGTATAAGAGGGGGAGAGCGAGGCTGTTATCAGTGATAGCGAAT
AATGACGGGAGGCCAGGATGAGTGAAATAGCTTGTACAGAAAAGGTCCCA
GGAGCATCGATGATACCATCATGTCAGCTACTGGAATCTATGTGCTTAGG
ATTCCTTCTTCGTAGGAGATAAAAAACTGTACATTTTACGA back to topprotein sequence of rna7152 >rna7152-protein ID=rna7152-protein|Name=rna7152|organism=Nannochloropsis gaditana|type=polypeptide|length=263bp
MFSPPSSSSSSSSSSSSSFSSSSSSSSSSSSSSFSSSSSSSSSTITTHPC
SLAFQIRHSNAPSSASVLVRREMALRFERTSSAVLPVYSRASWLASGLLL
AFFLLVHTFQLTNAQLEPAPVLPPPQTRPLPKVHLSEQERVLLRDESREM
FYHAFNSYMAHAYPFDELMPLSCKGRDWRKRDRGTLDDPLGGYALTLVDS
LDMLAVIGDYLDFYQAVQEVIRTLRFDRNVTVSVFEATIRVLGGLLSAHS
ILLSEEMAPRVSV back to topmRNA from alignment at CM002470.1:573012..574383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7152 ID=rna7152|Name=rna7152|organism=Nannochloropsis gaditana|type=mRNA|length=1372bp|location=Sequence derived from alignment at CM002470.1:573012..574383+ (Nannochloropsis gaditana)
CCACAACCCCTTTCCTTGGTCCAAAGACATGCTCACGCTTACTTTTGCGC
ACATCGGACAGGCAGTGTCGGCTTGTctgtcctccttcatgtTCGAGCTT
GTTGCCATCATCCCCGAGTGGTCACCGTAGGGCTCTAGCTatgttttccc
ctccctcctcctcctcctcctcctcttcctcctcctcctcctccttctcc
tcctcctcttcctcctcctcctcctcctcctcctcctccttctcctcctc
ctcttcctcctcctcctccaccatcaccacccaCCCCTGCTCCTTAGCGT
TTCAAATTCGTCACTCCAACGCTCCTTCATCAGCTTCAGTACTAGTAAGA
CGTGAGATGGCCTTGCGCTTCGAGCGAACATCGTCTGCTGTCTTGCCCGT
GTACTCTAGAGCTTCATGGCTGGCATCAGGCCTTttgctcgccttcttcc
ttctcgtccatACATTTCAATTAACGAATGCGCAGCTGGAACCAGCCCCT
GTGCTTCCACCGCCTCAgacccgccctcttcccaaaGTCCACCTCAGCGA
GCAGGaacgcgtcctcctccgcgacgaATCGCGGGAGATGTTTTATCACG
CCTTCAACAGCTATATGGCGCACGCCTACCCTTTCGATGAGCTGATGCCG
CTCTCCTGCAAAGGTAGAGCacgcaaggcggggggagaggacgaggatta
CCATGTGTCTTGGTTGGTTACATCTTCGTTCTGTGTGTGaacctctccct
ttccctttccccttcccccgcgtGGACACCCCCTTTCTGCcttctcccct
gcctccttcctccaggtcGGGATTGGAGAAAGCGAGATCGCGGCACACTG
GACGATCCGCTAGGGGGGTATGCGCTGACCCTGGTGGACTCCTTGGACAT
GCTGGCCGTGATAGGCGACTATCTCgagtaggaagggagggaaggagaga
gggagggaagggaggagaaattaTAGAGGATATGCTGAGGCGAtgatggc
ggggaggggtcgCTTAAAAAATGGCTTGTGGTGAAGGCCACCTTCTTTCA
TTCAGGAGGCTGGGTGCACTCTTTTGGATcgacacctccctccctccctc
cctccctccctcccttccccgtgcAACATCTCGTCTGGCCTTTCAGGAAG
CCTTGAGGAAGTCCCGAACCCCCACCCCActccctcaagccctcccctct
ctctcttcccccctccagttTCTACCAGGCGGTCCAGGAAGTCATCCGCA
CCCTCCGCTTCGACCGGAACGTCACCGTCAGTGTCTTCGAAGCGACCATC
CGGGTCCTCGGaggcctcctctccgcccactCCATCTTGCTctcggagga
gatggcgccCCGTGTTTCGGTC back to topCoding sequence (CDS) from alignment at CM002470.1:573012..574383+ >rna7152 ID=rna7152|Name=rna7152|organism=Nannochloropsis gaditana|type=CDS|length=2367bp|location=Sequence derived from alignment at CM002470.1:573012..574383+ (Nannochloropsis gaditana)
atgttttcccctccctcctcctcctcctcctcctcttcctcctcctcctc
ctccttctcctcctcctcttcctcctcctcctcctcctcctcctcctcct
tctcctcctcctcttcctcctcctcctccaccatcaccacccaCCCCTGC
TCCTTAGCGTTTCAAATTCGTCACTCCAACGCTCCTTCATCAGCTTCAGT
ACTAGTAAGACGTGAGATGGCCTTGCGCTTCGAGCGAACATCGTCTGCTG
TCTTGCCCGTGTACTCTAGAGCTTCATGGCTGGCATCAGGCCTTttgctc
gccttcttccttctcgtccatACATTTCAATTAACGAATGCGCAGCTGGA
ACCAGCCCCTGTGCTTCCACCGCCTCAgacccgccctcttcccaaaGTCC
ACCTCAGCGAGCAGGaacgcgtcctcctccgcgacgaATCGCGGGAGATG
TTTTATCACGCCTTCAACAGCTATATGGCGCACGCCTACCCTTTCGATGA
GCTGATGCCGCTCTCCTGCAAAGgtcGGGATTGGAGAAAGCGAGATCGCG
GCACACTGGACGATCCGCTAGGGGGGTATGCGCTGACCCTGGTGGACTCC
TTGGACATGCTGGCCGTGATAGGCGACTATCTCgattTCTACCAGGCGGT
CCAGGAAGTCATCCGCACCCTCCGCTTCGACCGGAACGTCACCGTCAGTG
TCTTCGAAGCGACCATCCGGGTCCTCGGaggcctcctctccgcccactCC
ATCTTGCTctcggaggagatggcgccCCGTGTTTCGGTCatgttttcccc
tccctcctcctcctcctcctcctcttcctcctcctcctcctccttctcct
cctcctcttcctcctcctcctcctcctcctcctcctccttctcctcctcc
tcttcctcctcctcctccaccatcaccacccaCCCCTGCTCCTTAGCGTT
TCAAATTCGTCACTCCAACGCTCCTTCATCAGCTTCAGTACTAGTAAGAC
GTGAGATGGCCTTGCGCTTCGAGCGAACATCGTCTGCTGTCTTGCCCGTG
TACTCTAGAGCTTCATGGCTGGCATCAGGCCTTttgctcgccttcttcct
tctcgtccatACATTTCAATTAACGAATGCGCAGCTGGAACCAGCCCCTG
TGCTTCCACCGCCTCAgacccgccctcttcccaaaGTCCACCTCAGCGAG
CAGGaacgcgtcctcctccgcgacgaATCGCGGGAGATGTTTTATCACGC
CTTCAACAGCTATATGGCGCACGCCTACCCTTTCGATGAGCTGATGCCGC
TCTCCTGCAAAGgtcGGGATTGGAGAAAGCGAGATCGCGGCACACTGGAC
GATCCGCTAGGGGGGTATGCGCTGACCCTGGTGGACTCCTTGGACATGCT
GGCCGTGATAGGCGACTATCTCgattTCTACCAGGCGGTCCAGGAAGTCA
TCCGCACCCTCCGCTTCGACCGGAACGTCACCGTCAGTGTCTTCGAAGCG
ACCATCCGGGTCCTCGGaggcctcctctccgcccactCCATCTTGCTctc
ggaggagatggcgccCCGTGTTTCGGTCatgttttcccctccctcctcct
cctcctcctcctcttcctcctcctcctcctccttctcctcctcctcttcc
tcctcctcctcctcctcctcctcctccttctcctcctcctcttcctcctc
ctcctccaccatcaccacccaCCCCTGCTCCTTAGCGTTTCAAATTCGTC
ACTCCAACGCTCCTTCATCAGCTTCAGTACTAGTAAGACGTGAGATGGCC
TTGCGCTTCGAGCGAACATCGTCTGCTGTCTTGCCCGTGTACTCTAGAGC
TTCATGGCTGGCATCAGGCCTTttgctcgccttcttccttctcgtccatA
CATTTCAATTAACGAATGCGCAGCTGGAACCAGCCCCTGTGCTTCCACCG
CCTCAgacccgccctcttcccaaaGTCCACCTCAGCGAGCAGGaacgcgt
cctcctccgcgacgaATCGCGGGAGATGTTTTATCACGCCTTCAACAGCT
ATATGGCGCACGCCTACCCTTTCGATGAGCTGATGCCGCTCTCCTGCAAA
GgtcGGGATTGGAGAAAGCGAGATCGCGGCACACTGGACGATCCGCTAGG
GGGGTATGCGCTGACCCTGGTGGACTCCTTGGACATGCTGGCCGTGATAG
GCGACTATCTCgattTCTACCAGGCGGTCCAGGAAGTCATCCGCACCCTC
CGCTTCGACCGGAACGTCACCGTCAGTGTCTTCGAAGCGACCATCCGGGT
CCTCGGaggcctcctctccgcccactCCATCTTGCTctcggaggagatgg
cgccCCGTGTTTCGGTC back to top
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