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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100961g2.3621.mrna |
| Orig protein id | gnl|cribi|Naga_100961g2.3621 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:568304..570467 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7150 ID=rna7150|Name=rna7150|organism=Nannochloropsis gaditana|type=mRNA|length=1606bp
AGGAATGGGACGGAGGCATCCACCTTTCCGGTGGATCAAAGGGAAAATTA
AGGGCCTGGTGTTTCGGTTTTGCATGATTGGCCATCTCCCTGGGCTGGGG
AGGTCAAGTCCCCCTGCCTTCGCCACCACCTCCTCTACCTGTCTCTCCCT
CTCTATCCCGTGCATGTCTTTGGCTTCTGTCACCTCAGGAAGTACCACAG
CAATATGCTCCCCCTCAATATCCCCTGGGGTGTGTGGTTTCATCCCCACG
ACCAGACCTTTGTCTCCACACAGACGACCTTGCCTCCTCCCCTTGCTCCT
GAACGTCCGAGGAGGGGCATCTTCAGCAAATTCTTTCGGCACTGACGCAA
GTAAGGGTAGTAATGCTGACTCAATTCCATCAATAGAGTCCGTGACGGAC
CCTGCAGAAGAGGCAGAAAGTGAAGAAACCCTCGCCCAGAGCCTGAAAGA
GGCCATCCGCCTTGAGAACGACGACATCACGTCGGTGTACGCTCCCAGTG
ACGCGGAGGCCCTGCGGAATGGACACGAAGGAACGGAGGTTCCTCAATGG
TCCATAGCGGAGGAGGAGGCGGATGGAGAGGGGGAAGGGAAGGAAGACGA
CGAGGTGGGGGCAGGGAGGCCGGTCCCGATGTCTTCCCTCCCCCTCACTG
AGCGCACCGCCTTCGTAATCATCGACCCTTTCTCCCCTTTCCTCGGCCGA
TATTTGAAACGGCGGGCACAGGCCATGGGCCTCGTTTGCATCGACGTCCT
CTCCCCGTACACGGTGGCCAGCCTCCAGGACGGCCCCCGGAAGTGGCGGG
CGCCGTGGCCGGGAGCCGAAAAAAAATGGGCGGCCCATCTCCCTGCCTTC
AAACGCGTGGCGTTTGTGTTGTCCGAGTCCGACCACGGGGCGGCCACGGC
CGAACGGATGCACGCGGCCGTGGGGGCGCCGGGGAACGGGGTAAATCCTA
CCCGGAGGAACAAGTACCTGACGAACAGGGCCCTCCAGGCCCGCGGCGTC
GGTTACACCCGGCAGATCCTAGCCGAGACTTGGGAGGAAGCCGAAGCCTT
TGTCCGCAATCAACTCCTCCCCACCCATCCCACGTCCTCCATATCTGCCA
CCCCCTCCTTCTCCTCCTCCCCTCCTCCCTCCTCCCCTCCCTCCTTCTCC
TCCTCCTCCTTCTCCTCCCCCCCCCCCCTCCCTTCCTCCTCCTCCTCCTC
CTCCTCCTCCCCCTCCTCGGTGCCCCTCGCCGTGGTCAAGCCCGTCCGAG
GCGCCGCCAGTGGTGACGTCCATGTCTGCCAGGACCTTCCCTCCATCCGC
ATCGCCTTCCAGGCCATCAAGGACAGCCCTAAATACGGCGGAGGCGTCAA
CACCCAAGTCCTCCTCCAGGAATACTTGCTTGGGGAGGAGTTCGCCGTCG
ATACCGTTTCCTGCAACGGCTCCCACAAAGTAACGGCGGTTTGGCGATAC
GATAAACGGCCCGTGAACGGCGCGCCCTGCGTCTACCACGCCACCATTTT
GCGGGCGGCAGAGGCAGGGAGTGAGGAGGAGCGAGTGTGCGAGTACGTAT
TGCAGGAGGTGCTGCCGGCGATGGACATCAAGTGGGGGCCCACGCACACG
GAGTAG back to topprotein sequence of rna7150 >rna7150-protein ID=rna7150-protein|Name=rna7150|organism=Nannochloropsis gaditana|type=polypeptide|length=566bp
MRKDSTAEEGEAYTRGGRNWGCGITKPHIFILKTLASVFNLSLPPFPHMF
PRFPPSLPPSFPSLTSDAVGRQFEALASVLPHLPSYSLSSLALFTRQLLQ
LFLLAKSPTYRALLVGFLETVDWPLLTAVAAEARRAPSSRPCSGALGKRG
VEGERGSGGRGTGGGEDPVGRRAHFPTSDAPSISSPAPAVSTLASPSLLP
SLPNLLRHLLNDESQADVQRRSLSLRLLGLLAHPTASPNLHLPSLLIDTS
LPSLIPGIPSAACTALSTLARQHPPFLSRSLLPSLEAILLSDTHALDEAA
KRPLLESCACLAASVFPLPPAHPPSLPPLEASPRPSDWVRARNLLLQALP
RLHAPSTHITALSSLTALGRDRWLSPRRQKAEEGGLANREEGGEGNDEVL
PILTALVDHVRTGLAVGPYVSEHASLCALRLLRALPPSLPPSLLQRPILT
ALLKRLFETPPLYNGSLLASYLRLLGALSLTTHPSTSSSPPSIAASILSA
LVADDLLVWILPSSSPPPVPLPPRAGREGGREGGRSLATSAQEEAMVRLV
WTQALASTLVRVDAEG back to topmRNA from alignment at CM002470.1:568304..570467+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7150 ID=rna7150|Name=rna7150|organism=Nannochloropsis gaditana|type=mRNA|length=2164bp|location=Sequence derived from alignment at CM002470.1:568304..570467+ (Nannochloropsis gaditana)
CGTACAGGTGGTGTGGAgtttgtcttcctcctgccagCTTGGACGCATTG
TGAAGGGCCCAAATGGAGGGAGCTGGCAcctttcctcgcccctcccttcc
aagcGTCACCCGGGCTCTGTACGAGCGAGTAATACCCAATGATCATCCGG
TGCTGCTTCCCGCGGATAATCTGGTCATGGGCGCACGAAAAGCCTCAAAC
agcggaagagaaagcagtgGACAAAGGTGGGATGACAAAGGGGAGCAAAG
CCTGTTAAACCCCTTATATGTCATGAAGCAAGCGGAGGCCATTGCGAGGT
AGGGGGAGGCTAAACACTTCCCGGTCTGGGGGTAAGGAGAACATTGAGCC
TCTCAccgagaagaaaaatgggaATTTTTCCGGAAACAATTGTAAGAGAG
TCCTGCAATATTTGTGACCGATGTGAAAGCGAAAGAGAGAGAATACGGGC
GAGATTCTTGCTCACATGAGGAAGGACAGTACTGCCGAGGAGGGTGAAGC
TTATACGCGAGGAGGGCGCAACTGGGGTTGCGGCATCACAAAACCTCACA
TCTTTATCTTAAAAACCCTCGCATCGGTTTTCaacctctctctccctcca
tttccccacATGtttccccgcttccctccttccctccccccctccttccc
ttccttgaccAGCGACGCTGTCGGCCGTCAGTTCGAAGCActcgcctccg
tcctcccacacctcccctcctactcCTTGTCGTCCCTGGCTCTCTTCACC
CGCCAGCTTCTCcaactcttcctcctcgccaaaAGCCCGACCTATCGGGC
ATTGCTCGTCGGGTTTTTGGAAACGGTGGATTGGCCGTTACTCACGGCCG
TGGCCGCGGAAGCCCGGCGAGCGCCCTCTTCTCGGCCTTGTTCAGGCGCT
ttggggaagcgaggggtggagggagagaggggaagcggaggaagaggcac
ggggggaggggaggatccTGTCGGACGCCGAGCTCACTTTCCTACATCGG
ACGCCCCCtcgatttcctcccccgcccctgccgTCAGtaccctcgcctcc
ccctccctcctcccctccctccccaacctcctccgccacctcctcaaCGA
CGAGAGCCAGGCCGACGTCCAGCGccggtccctctccctccgcctcctcg
gtctCCTGGCCCatcccaccgcctccccgaacctccacctcccttccctc
ctcatcgacacctcccttccctccctcatccccgGCATCCCTTCAGCGGC
CTGCACTGCCCTCTCTACCCTCGCCCGACAAcacccgcccttcctctctc
gctccctccttccctccctcgaagccatcctcctctccgacaCGCACGCG
TTGGACGAAGCAGCGAAACGCCCTTTGCTAGAATCCTGCGCCtgcctcgc
tgcctccgtcttccccctccctcccgcccaccctccttccctcccaccct
tggAGGCTTCGCCCCGGCCCTCGGACTGGGTCCGTGCCcggaacctcctc
cttcaggccctccctcgccttcacGCTCCTTCCACGCACATCACGGCCTT
GAGCTCCCTCACTGCCTTGGGACGCGACCGGTGGCTCTCTCCTCGCCGCC
AAaaggccgaggaagggggcctTGCaaacagggaggagggaggggagggg
aacgacGAGGTGCTTCCCATCCTCACTGCCCTGGTCGACCACGTGAGGAC
GGGCCTGGCGGTGGGCCCGTACGTGTCAGAGCACGCTTCCCTGTGTGcgc
ttcgcctccttcgtgccctccctccctctctccctccctccctccttcaa
cggCCCATCCTTACCGCCCTCCTCAAACGGTTATTTGAAACGCCGCCGTT
GTATAACGGCTCCCTCCTGGCCAGCTACCTCCGTCTCCTGggtgccctct
ccctcaccacacacccctccacttcctcctcccccccctccatcgctgcc
tccatcctctcagCCCTGGTCGCGGACGATCTCCTGGTATggatccttcc
ctcctcctcccctcctcccgtcccattGCCAccacgggcagggagggagg
gagggcgggagggagggcggtcgcTGGCAACGAgtgcgcaggaggaggcg
atggttCGCTTGGTGTGGACCCAGGCACTTGCCTCCACGCTGGTACGAGT
CGATGCCGAGGGAG back to topCoding sequence (CDS) from alignment at CM002470.1:568304..570467+ >rna7150 ID=rna7150|Name=rna7150|organism=Nannochloropsis gaditana|type=CDS|length=1699bp|location=Sequence derived from alignment at CM002470.1:568304..570467+ (Nannochloropsis gaditana)
ATGAGGAAGGACAGTACTGCCGAGGAGGGTGAAGCTTATACGCGAGGAGG
GCGCAACTGGGGTTGCGGCATCACAAAACCTCACATCTTTATCTTAAAAA
CCCTCGCATCGGTTTTCaacctctctctccctccatttccccacATGttt
ccccgcttccctccttccctccccccctccttcccttccttgaccAGCGA
CGCTGTCGGCCGTCAGTTCGAAGCActcgcctccgtcctcccacacctcc
cctcctactcCTTGTCGTCCCTGGCTCTCTTCACCCGCCAGCTTCTCcaa
ctcttcctcctcgccaaaAGCCCGACCTATCGGGCATTGCTCGTCGGGTT
TTTGGAAACGGTGGATTGGCCGTTACTCACGGCCGTGGCCGCGGAAGCCC
GGCGAGCGCCCTCTTCTCGGCCTTGTTCAGGCGCTttggggaagcgaggg
gtggagggagagaggggaagcggaggaagaggcacggggggaggggagga
tccTGTCGGACGCCGAGCTCACTTTCCTACATCGGACGCCCCCtcgattt
cctcccccgcccctgccgTCAGtaccctcgcctccccctccctcctcccc
tccctccccaacctcctccgccacctcctcaaCGACGAGAGCCAGGCCGA
CGTCCAGCGccggtccctctccctccgcctcctcggtctCCTGGCCCatc
ccaccgcctccccgaacctccacctcccttccctcctcatcgacacctcc
cttccctccctcatccccgGCATCCCTTCAGCGGCCTGCACTGCCCTCTC
TACCCTCGCCCGACAAcacccgcccttcctctctcgctccctccttccct
ccctcgaagccatcctcctctccgacaCGCACGCGTTGGACGAAGCAGCG
AAACGCCCTTTGCTAGAATCCTGCGCCtgcctcgctgcctccgtcttccc
cctccctcccgcccaccctccttccctcccacccttggAGGCTTCGCCCC
GGCCCTCGGACTGGGTCCGTGCCcggaacctcctccttcaggccctccct
cgccttcacGCTCCTTCCACGCACATCACGGCCTTGAGCTCCCTCACTGC
CTTGGGACGCGACCGGTGGCTCTCTCCTCGCCGCCAAaaggccgaggaag
ggggcctTGCaaacagggaggagggaggggaggggaacgacGAGGTGCTT
CCCATCCTCACTGCCCTGGTCGACCACGTGAGGACGGGCCTGGCGGTGGG
CCCGTACGTGTCAGAGCACGCTTCCCTGTGTGcgcttcgcctccttcgtg
ccctccctccctctctccctccctccctccttcaacggCCCATCCTTACC
GCCCTCCTCAAACGGTTATTTGAAACGCCGCCGTTGTATAACGGCTCCCT
CCTGGCCAGCTACCTCCGTCTCCTGggtgccctctccctcaccacacacc
cctccacttcctcctcccccccctccatcgctgcctccatcctctcagCC
CTGGTCGCGGACGATCTCCTGGTATggatccttccctcctcctcccctcc
tcccgtcccattGCCAccacgggcagggagggagggagggcgggagggag
ggcggtcgcTGGCAACGAgtgcgcaggaggaggcgatggttCGCTTGGTG
TGGACCCAGGCACTTGCCTCCACGCTGGTACGAGTCGATGCCGAGGGAG back to top
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