rna7143, rna7143 (mRNA) Nannochloropsis gaditana

Overview
Namerna7143
Unique Namerna7143
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length357
Alignment locationCM002470.1:546453..547392 -

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Properties
Property NameValue
Productexpressed unknown protein
Orig transcript idgnl|cribi|Naga_101203g2.3194.mrna
Orig protein idgnl|cribi|Naga_101203g2.3194
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:546453..547392 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101203g2gene6906Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7143rna7143-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23547.1cds7126Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7143 ID=rna7143|Name=rna7143|organism=Nannochloropsis gaditana|type=mRNA|length=357bp
ATGGTGGTGGATGTCTATCGGATCAAGAAGAAGAAAGGGGCGAAAGGCCA
GGAGGAGGACGGGAACTACATGCAGCGCTTCTCCGGCGACTGGGAGACCA
CCTTCAAACAAGGCAGCAAGTGGTCCGTCCCCGACACCAAGGCCGGGGGA
ATGGCCTTGAGGCAGAGCAAACCGGACGGGGGCGCCGTCTGTCCCACGTG
TAAAGGCGGCGGAAAGAATCCTTGTTTCAATTGCAAGGGGAAGGGAGTCC
TGGTTTCGGGGCAACGCTCACTTACCTGCTATATCTGCAAAGGAGAAGGA
ATGTACTTTTGTGCCGATTGTCAGGCGACGGGGATGATTAGTCGGAAGAA
GGTGTAG
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protein sequence of rna7143

>rna7143-protein ID=rna7143-protein|Name=rna7143|organism=Nannochloropsis gaditana|type=polypeptide|length=182bp
MARHRRREDRGSPSIFPSSSALLLFLSCLCDNSRAFCLYQRPAHHFTSFL
LHGRQPFSSFPLASSFSPSASLPTSSLASSTSPAEPLDNVRETIQVRFIN
TPDGNDVVTTAQEGDNLMKVGDKAGISIPRACCTGLCGTCTSDLRDPSYT
FKGEDKPAGAREGYQTIRACSTQPLARRLSSG
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mRNA from alignment at CM002470.1:546453..547392-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7143 ID=rna7143|Name=rna7143|organism=Nannochloropsis gaditana|type=mRNA|length=940bp|location=Sequence derived from alignment at CM002470.1:546453..547392- (Nannochloropsis gaditana)
ATGGCGCGGCACCGGCGGAGAGAGGACCGGGGGTCTCCCTCCATCTTCCC
TTCGAGCTCGGCTTTACTCCTCTTCCTCTCTTGCCTTTGTGACAATTCTC
GCGCTTTCTGTCTTTATCAAAGACCAGCACACCATTTTACCTCCTTCTTG
CTACATGGGCGACAACCTTTCTCTTCCTTCCCCCTCGCCTCCTCCTTCTC
CCCCTCCGCCTCCCTCCCTACCTCCTCTCTGGCCTCCTCCACATCCCCTG
CGGAGCCCCTTGACAACGTGCGCGAGACCATCCAAGTGCGGTTTATCAAC
ACGCCAGACGGAAACGATGTGGTCACCACGGCACAAGAGGGAGACAATTT
GATGAAGGTAGGAAGTAGGGGGGAGGGAACGGCGGAGAAGGGCATGGGCC
ACCGTTTCGCCTGCAACTAAGTTCGTTCCGTGCATTGATCTTCCTCCAGA
GAAGACTGGCCTTTGCTCACGATGGAAGTATGTCCTCACAAGACTGGCAT
TGTCGCCTGTTGTCGCCTTTCCATGCCCTGACCTTCGCGCCCCTTACAAG
ATGTCTCCCTCCCTCCCTCCCTCCAAACCCTTCTTTCCTCCCCAACTCCC
ATTACCCCTCCTTTCCCTGTCAGGTCGGAGACAAAGCGGGCATCTCCATC
CCTCGAGCCTGCTGCACGGGCCTCTGCGGCACCTGTACCAGCGATTTGCG
AGACCCTTCCTATACGTTCAAGGGGGAAGACAAGCCTGCCGGCGCCCGCG
AAGGCTATCAGACCATCCGCGCGTGCTCCACGCAGGTGACTTCTCCCTCC
CTCCCTTCCTCCCTCTCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCT
CCCTTTCCCTCCCCTTCTCTTGCCCTCGATCCTTGCTCTGGTACGATTTT
GTTCTCCCAGCCTCTCGCACGGCGTCTCAGCAGTGGATAG
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Coding sequence (CDS) from alignment at CM002470.1:546453..547392-

>rna7143 ID=rna7143|Name=rna7143|organism=Nannochloropsis gaditana|type=CDS|length=1647bp|location=Sequence derived from alignment at CM002470.1:546453..547392- (Nannochloropsis gaditana)
CCTCTCGCACGGCGTCTCAGCAGTGGATAGGTCGGAGACAAAGCGGGCAT
CTCCATCCCTCGAGCCTGCTGCACGGGCCTCTGCGGCACCTGTACCAGCG
ATTTGCGAGACCCTTCCTATACGTTCAAGGGGGAAGACAAGCCTGCCGGC
GCCCGCGAAGGCTATCAGACCATCCGCGCGTGCTCCACGCAGATGGCGCG
GCACCGGCGGAGAGAGGACCGGGGGTCTCCCTCCATCTTCCCTTCGAGCT
CGGCTTTACTCCTCTTCCTCTCTTGCCTTTGTGACAATTCTCGCGCTTTC
TGTCTTTATCAAAGACCAGCACACCATTTTACCTCCTTCTTGCTACATGG
GCGACAACCTTTCTCTTCCTTCCCCCTCGCCTCCTCCTTCTCCCCCTCCG
CCTCCCTCCCTACCTCCTCTCTGGCCTCCTCCACATCCCCTGCGGAGCCC
CTTGACAACGTGCGCGAGACCATCCAAGTGCGGTTTATCAACACGCCAGA
CGGAAACGATGTGGTCACCACGGCACAAGAGGGAGACAATTTGATGAAGC
CTCTCGCACGGCGTCTCAGCAGTGGATAGGTCGGAGACAAAGCGGGCATC
TCCATCCCTCGAGCCTGCTGCACGGGCCTCTGCGGCACCTGTACCAGCGA
TTTGCGAGACCCTTCCTATACGTTCAAGGGGGAAGACAAGCCTGCCGGCG
CCCGCGAAGGCTATCAGACCATCCGCGCGTGCTCCACGCAGATGGCGCGG
CACCGGCGGAGAGAGGACCGGGGGTCTCCCTCCATCTTCCCTTCGAGCTC
GGCTTTACTCCTCTTCCTCTCTTGCCTTTGTGACAATTCTCGCGCTTTCT
GTCTTTATCAAAGACCAGCACACCATTTTACCTCCTTCTTGCTACATGGG
CGACAACCTTTCTCTTCCTTCCCCCTCGCCTCCTCCTTCTCCCCCTCCGC
CTCCCTCCCTACCTCCTCTCTGGCCTCCTCCACATCCCCTGCGGAGCCCC
TTGACAACGTGCGCGAGACCATCCAAGTGCGGTTTATCAACACGCCAGAC
GGAAACGATGTGGTCACCACGGCACAAGAGGGAGACAATTTGATGAAGCC
TCTCGCACGGCGTCTCAGCAGTGGATAGGTCGGAGACAAAGCGGGCATCT
CCATCCCTCGAGCCTGCTGCACGGGCCTCTGCGGCACCTGTACCAGCGAT
TTGCGAGACCCTTCCTATACGTTCAAGGGGGAAGACAAGCCTGCCGGCGC
CCGCGAAGGCTATCAGACCATCCGCGCGTGCTCCACGCAGATGGCGCGGC
ACCGGCGGAGAGAGGACCGGGGGTCTCCCTCCATCTTCCCTTCGAGCTCG
GCTTTACTCCTCTTCCTCTCTTGCCTTTGTGACAATTCTCGCGCTTTCTG
TCTTTATCAAAGACCAGCACACCATTTTACCTCCTTCTTGCTACATGGGC
GACAACCTTTCTCTTCCTTCCCCCTCGCCTCCTCCTTCTCCCCCTCCGCC
TCCCTCCCTACCTCCTCTCTGGCCTCCTCCACATCCCCTGCGGAGCCCCT
TGACAACGTGCGCGAGACCATCCAAGTGCGGTTTATCAACACGCCAGACG
GAAACGATGTGGTCACCACGGCACAAGAGGGAGACAATTTGATGAAG
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Synonyms
Publications