rna7125, rna7125 (mRNA) Nannochloropsis gaditana

Overview
Namerna7125
Unique Namerna7125
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1079
Alignment locationCM002470.1:505292..506287 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101424g1.10180.mrna
Orig protein idgnl|cribi|Naga_101424g1.10180
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:505292..506287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101424g1gene6890Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7125rna7125-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23565.1cds7108Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7125 ID=rna7125|Name=rna7125|organism=Nannochloropsis gaditana|type=mRNA|length=1079bp
TTTAACTGTACAGACACGTGTTGACACAACACTCGTATGGCCACAGGGAG
CAAATATCAGGTACCATCAAGACTGTGTCTGGTCGAATGAACCCTCCTAG
AGTCTCCTCCCCACCCTCTCCCCCGCCGTGCGAAGAAACGCCTTTTGCAC
ATTCGCCTCCCCGTTCCCAGATTGATCGACCGGAAAGCATTGCCTACACA
CCGCACGCCTGGTGCTGTCGTCGACGCTGCCATCTCCAGGGTGGAATTCT
CGTCCTTTGGTTGGTTGTGGTCATCTTAATCGCAGTGGATTACTCACCAG
CAGGCCATCGGCACGTGGCTCGAGTACTTTCCACTTTCTTGGAATGGGTA
GGCCGCCACCCTCTCAGAGGGGCCATGGCATTTGCAGCCGTCTACGCCTT
GAGCGTCGTTTTCTTCGTGCCTGGAGCCGCTTTGACCTTGGGGGGGGGGT
TTCTCTTCGGACAAGCACTGGGCGTGGGGCCCGGTACGGTCTTTGCCTCG
CTCGCAGTCTTTGTGGGGGCGAGTGCGGGGGCCGTGGCCGCATTCAGCCT
CGGCCGATGGCTTTTGCATGAAACAGCCCAGTCCACGCTGAACCGGTACA
CTATACTACGGGCCTTGGACGCCTCCTTGCACGGGCACCGGGGCTTGAAA
ATCGTGCTCCTCCTGCGTCTATCGCCCCTCGTCCCCTTTACCGCCCTGAA
TTACATGATGAGCGTCACCTCCGTGTCCCTAAAGACGTACACTCTGGGCC
TGGTGGGGATGGTACCGGCCGTCGTCGCCTACTCGTTCCTGGGGACCACG
GCGGGGGGCTTGACCAGGGAGGCAGGGGGGGAGAGCTCGGTGGAGAGAGG
GGTGAAGATTGCGATGTACGTGGTGGGAGCAGTGGCCTTGGTGGCTGCTG
TAGGCGTGCTTTCTCGGTTCGCGAGGGAAGAATTGCGGAAAATTCAGGAT
GAGGGGGAGGGGGCGCGGGGGGAGGGGAGAGACGTGGAGGGAGGGGGGGA
GGGAGAGGTGAAGGAGGTGGGAAGAGGGAGGGAGGAAAAGCAGGAGGTAG
AGAGGGAGAAAGAAGCGGAGGAAAGATAG
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protein sequence of rna7125

>rna7125-protein ID=rna7125-protein|Name=rna7125|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MATADGEDAKAATSPPTPVFPADNMQSTPTHPFPPSHAAALEEGVFSSPS
SNVQSLLQTEARHTYDGPLCPPCAAAWTALMHACHRDTGGNHDRHPQPQE
PEASEGSIGEGASVPTPVAGPFPDNRDRALHDRPSFSLSLPTITGMTLGA
RACLPPPSPPSRAPSLPSSSLPPAPRPPPASSPSPSKPTLLPSLHEIQEE
GAWQASARHASALVLKFNCGLIGGVTQAGLFNPWDRALYLSVKYSRPFLS
VANFQRPYQGFWQVGSVVGWKGGKEGGRGGGRGGGREGGVLLRPFVAAPA
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mRNA from alignment at CM002470.1:505292..506287+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7125 ID=rna7125|Name=rna7125|organism=Nannochloropsis gaditana|type=mRNA|length=996bp|location=Sequence derived from alignment at CM002470.1:505292..506287+ (Nannochloropsis gaditana)
CATGGACCAAGCGCGGGGATCGGGGCCCTTCAGACAacaagcaggggaag
gatgagCGTGGGGTCGAGGTAGCTATCCCGAACAGCACTTTCCATGGCAA
CGGCTGATGGAGAGGACGCGAAGGCAGCTAcctcgcctcccacccctgtG
TTCCCAGCAGACAACATGCAAAGCACACCCACACATCCTTTTCCACCTTC
GCACGCGGCAGCCCTCGAGGAGGGggtattttcctccccttcttccaacG
TGCAGTCCCTGCTGCAAACGGAGGCGCGACACACGTATGATGGCCCCTTA
TGCCCGCCCTGTGCGGCCGCTTGGACGGCGCTAATGCATGCATGCCACCG
TGACACAGGGGGTAATCATGACCGCCACCCTCAGCCTCAGGAGCCTGAGG
CGTCGGAGGGATCAATAGGAGAAGGCGCTTCAGTGCCGACCCCGGTCGCG
GGGCCGTTCCCTGACAATCGTGACAGAGCCCTCCACGAtcgcccgtcctt
ctccctctcccttcccacaaTAACCGGCATGACCCTCGGAGCCCGCGCAT
Gcttgccgccgccctcccctccttctcgtgccccgtccctcccctcgtcc
tccctcccgcccgcccctcgtcctcctcctgcctcctccccctccccttc
caaacccaccctcctcccttccctccacgaaatccaagaagaaggcgccT
GGCAGGCATCCGCCCGGCACGCCTCGGCGTTGGTGCTCAAATTTAACTGC
GGTTTGATCGGCGGCGTCACCCAAGCGGGCTTATTTAACCCTTGGGATCG
AGCCCTGTATCTCTCGGTCAAATACTCACGACCCTTTCTCTCGGTTGCTA
ATTTCCAACGGCCCTACCAAGGATTTTGGCAGGTCGGGAGCGTGGttgga
tggaagggagggaaagagggagggagggggggcgggaggggaggagggag
ggagggaggggttctCCTGCGTCCCTTCGTTGCCGCGCCTGCGTGA
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Coding sequence (CDS) from alignment at CM002470.1:505292..506287+

>rna7125 ID=rna7125|Name=rna7125|organism=Nannochloropsis gaditana|type=CDS|length=903bp|location=Sequence derived from alignment at CM002470.1:505292..506287+ (Nannochloropsis gaditana)
ATGGCAACGGCTGATGGAGAGGACGCGAAGGCAGCTAcctcgcctcccac
ccctgtGTTCCCAGCAGACAACATGCAAAGCACACCCACACATCCTTTTC
CACCTTCGCACGCGGCAGCCCTCGAGGAGGGggtattttcctccccttct
tccaacGTGCAGTCCCTGCTGCAAACGGAGGCGCGACACACGTATGATGG
CCCCTTATGCCCGCCCTGTGCGGCCGCTTGGACGGCGCTAATGCATGCAT
GCCACCGTGACACAGGGGGTAATCATGACCGCCACCCTCAGCCTCAGGAG
CCTGAGGCGTCGGAGGGATCAATAGGAGAAGGCGCTTCAGTGCCGACCCC
GGTCGCGGGGCCGTTCCCTGACAATCGTGACAGAGCCCTCCACGAtcgcc
cgtccttctccctctcccttcccacaaTAACCGGCATGACCCTCGGAGCC
CGCGCATGcttgccgccgccctcccctccttctcgtgccccgtccctccc
ctcgtcctccctcccgcccgcccctcgtcctcctcctgcctcctccccct
ccccttccaaacccaccctcctcccttccctccacgaaatccaagaagaa
ggcgccTGGCAGGCATCCGCCCGGCACGCCTCGGCGTTGGTGCTCAAATT
TAACTGCGGTTTGATCGGCGGCGTCACCCAAGCGGGCTTATTTAACCCTT
GGGATCGAGCCCTGTATCTCTCGGTCAAATACTCACGACCCTTTCTCTCG
GTTGCTAATTTCCAACGGCCCTACCAAGGATTTTGGCAGGTCGGGAGCGT
GGttggatggaagggagggaaagagggagggagggggggcgggaggggag
gagggagggagggaggggttctCCTGCGTCCCTTCGTTGCCGCGCCTGCG
TGA
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Synonyms
Publications