EWM23565.1, cds7108 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|585104694|gb|EWM23565.1| (hypothetical protein Naga_101424g1 [Nannochloropsis gaditana]) HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 Query: 1 MATADGEDAKAATSPPTPVFPADNMQSTPTHPFPPSHAAALEEGVFSSPSSNVQSLLQTEARHTYDGPLCPPCAAAWTALMHACHRDTGGNHDRHPQPQEPEASEGSIGEGASVPTPVAGPFPDNRDRALHDRPSFSLSLPTITGMTLGARACLPPPSPPSRAPSLPSSSLPPAPRPPPASSPSPSKPTLLPSLHEIQEEGAWQASARHASALVLKFNCGLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQVGSVVGWKGGKEGGRGGGRGGGREGGVLLRPFVAAPA 300 MATADGEDAKAATSPPTPVFPADNMQSTPTHPFPPSHAAALEEGVFSSPSSNVQSLLQTEARHTYDGPLCPPCAAAWTALMHACHRDTGGNHDRHPQPQEPEASEGSIGEGASVPTPVAGPFPDNRDRALHDRPSFSLSLPTITGMTLGARACLPPPSPPSRAPSLPSSSLPPAPRPPPASSPSPSKPTLLPSLHEIQEEGAWQASARHASALVLKFNCGLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQVGSVVGWKGGKEGGRGGGRGGGREGGVLLRPFVAAPA Sbjct: 1 MATADGEDAKAATSPPTPVFPADNMQSTPTHPFPPSHAAALEEGVFSSPSSNVQSLLQTEARHTYDGPLCPPCAAAWTALMHACHRDTGGNHDRHPQPQEPEASEGSIGEGASVPTPVAGPFPDNRDRALHDRPSFSLSLPTITGMTLGARACLPPPSPPSRAPSLPSSSLPPAPRPPPASSPSPSKPTLLPSLHEIQEEGAWQASARHASALVLKFNCGLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQVGSVVGWKGGKEGGRGGGRGGGREGGVLLRPFVAAPA 300
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|966499692|ref|WP_058516365.1| (hypothetical protein [Legionella parisiensis] >gi|962260235|gb|KTD44350.1| hypothetical protein Lpar_0436 [Legionella parisiensis] >gi|1069290487|gb|OEH45892.1| hypothetical protein lpari_03080 [Legionella parisiensis]) HSP 1 Score: 82.8037 bits (203), Expect = 1.570e-14 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 216 KFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 KFN GLI GV+ +GLFNPWDRALYLSVKY+RPFLSV NF+ PYQGF Q Sbjct: 23 KFNIDVASGLIAGVSNSGLFNPWDRALYLSVKYNRPFLSVQNFKSPYQGFSQ 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|518063991|ref|WP_019234199.1| (hypothetical protein [Legionella anisa] >gi|962192057|gb|KTC77132.1| carrier protein [Legionella anisa] >gi|1175793364|gb|OQW26714.1| hypothetical protein A6J39_02285 [Legionella anisa]) HSP 1 Score: 81.2629 bits (199), Expect = 5.668e-14 Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 Query: 209 HASALVLKFNCGLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 + L + GLI GV+ +GLFNPWDRALYLSVKY+RPFLSV NF+ PYQGF Q Sbjct: 20 YKQKLNIDVASGLIAGVSNSGLFNPWDRALYLSVKYNRPFLSVQNFKSPYQGFSQ 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|966436463|ref|WP_058476831.1| (hypothetical protein [Legionella steigerwaltii] >gi|962294860|gb|KTD78519.1| carrier protein [Legionella steigerwaltii]) HSP 1 Score: 80.8777 bits (198), Expect = 7.974e-14 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0 Query: 213 LVLKFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 + KFN GLI GV+ AG+FNPWDRALYLSVKY+RPFLS+ NF+ PYQGF Q Sbjct: 19 FMQKFNIDVASGLIVGVSTAGIFNPWDRALYLSVKYNRPFLSIENFKDPYQGFSQ 73
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|966505142|ref|WP_058521801.1| (hypothetical protein [Legionella tucsonensis] >gi|962287502|gb|KTD71230.1| carrier protein [Legionella tucsonensis]) HSP 1 Score: 80.4925 bits (197), Expect = 8.886e-14 Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 0 Query: 216 KFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 KFN GLI GV+ +G FNPWDRALYLSVKY+RPFLSV NF+ PYQGF Q Sbjct: 23 KFNIDVASGLIAGVSNSGFFNPWDRALYLSVKYNRPFLSVQNFKSPYQGFSQ 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|966494857|ref|WP_058511645.1| (hypothetical protein [Legionella steelei] >gi|1113345217|gb|OJW09042.1| hypothetical protein BGO44_15510 [Legionella sp. 39-23]) HSP 1 Score: 78.5666 bits (192), Expect = 4.642e-13 Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0 Query: 216 KFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 KFN GLI GV +G+FNPWDRALYLSVKY+RPFL+ ANF+ PYQGF Q Sbjct: 19 KFNVDAASGLIVGVATSGIFNPWDRALYLSVKYNRPFLTAANFKSPYQGFSQ 70
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|962283948|gb|KTD67714.1| (hypothetical protein Lste_0872 [Legionella steelei]) HSP 1 Score: 78.1814 bits (191), Expect = 5.766e-13 Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = 0 Query: 216 KFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGF 261 KFN GLI GV +G+FNPWDRALYLSVKY+RPFL+ ANF+ PYQGF Sbjct: 25 KFNVDAASGLIVGVATSGIFNPWDRALYLSVKYNRPFLTAANFKSPYQGF 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|671586399|ref|WP_031562849.1| (hypothetical protein [Legionella wadsworthii]) HSP 1 Score: 75.8702 bits (185), Expect = 4.079e-12 Identity = 34/44 (77.27%), Postives = 36/44 (81.82%), Query Frame = 0 Query: 220 GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 GLI GV +GLFNPWDRALYLSVKY+RPFLS NF PYQGF Q Sbjct: 31 GLIAGVANSGLFNPWDRALYLSVKYNRPFLSWENFTAPYQGFSQ 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|644964377|ref|WP_025385132.1| (hypothetical protein [Legionella oakridgensis] >gi|570284119|gb|AHE66306.1| mitochondrial carrier protein [Legionella oakridgensis ATCC 33761 = DSM 21215] >gi|570703034|gb|ETO93940.1| carrier protein [Legionella oakridgensis RV-2-2007] >gi|962253058|gb|KTD37244.1| carrier protein [Legionella oakridgensis]) HSP 1 Score: 75.8702 bits (185), Expect = 4.083e-12 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0 Query: 219 CGLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 GLI G + +GLFNPWDRALYLSVK++RPFLS+ NF+ PYQGF Q Sbjct: 30 SGLIAGASNSGLFNPWDRALYLSVKHNRPFLSIQNFKSPYQGFSQ 74
BLAST of EWM23565.1 vs. NCBI_GenBank
Match: gi|963702259|ref|WP_058387364.1| (hypothetical protein [Legionella cherrii] >gi|962197268|gb|KTC82312.1| carrier protein [Legionella cherrii]) HSP 1 Score: 74.7146 bits (182), Expect = 9.088e-12 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0 Query: 216 KFNC----GLIGGVTQAGLFNPWDRALYLSVKYSRPFLSVANFQRPYQGFWQ 263 KFN GLI GV+ +G+FNPWDRALYLSVK++RPFLSV +F+ PYQGF Q Sbjct: 22 KFNIDVASGLIVGVSTSGVFNPWDRALYLSVKHNRPFLSVEHFKSPYQGFSQ 73 The following BLAST results are available for this feature:
BLAST of EWM23565.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|