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Properties
| Property Name | Value |
|---|
| Product | SNARE associated Golgi protein |
| Orig transcript id | gnl|cribi|Naga_101424g2.10181.mrna |
| Orig protein id | gnl|cribi|Naga_101424g2.10181 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:503827..504905 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7124 ID=rna7124|Name=rna7124|organism=Nannochloropsis gaditana|type=mRNA|length=1846bp
TCCCGCCCTCCTTCTTTTCCTCCTAGCGGTCAAGCCCTTCCCACATGTGC
CGCTTTTGCGAGCAAGCCAAAGCTCAAATCGCCGGCATCGCCCGCCCTGG
ATCCACTCCGCCCGCTTCCTCCTCCTCTCCCTTCTTCCCTCCCTCTTCCC
CTTCCTCCCCTGCTTCCTTCCCTCCCTCTTCCCCTCCCTCCTCTTACTCT
TACGCTGGCCTTTCCTTCTCCGAACGCAGAGAGATTGAGTCCTGTGCGTT
GCTGCGCTCAAAACGCCTCCCTGTCACGCTCCTCTGTGGTTATTTGGGCT
CCGGCAAGACGACGTTTCTCAATTATGTGCTTCAGGGCAGTCACGGGAAG
CGTCTGGCCGTGATTGAGAATGAATTCGGCGCTGTCAGCATCGACGACGC
CTTGCTACCTTCCCCTCCCTCCCCCGCTTCCTCCGCCCCGTCCTCCCCTT
CCTCCTTGCGTGCGCGGGCCCCGGAGGAGGCTCAGGTGGTCCTGATGCCC
AATGGCTGTCTTTGTTGCCGGGCGCGACAAGATTTGGTCGAAGCCTTCCT
CCACCTCCTCGCCGTCAACACAAAGCAGCAGAAAGGCGTCGCCACCTTAC
AACTCGATGGCATTATTCTAGAACTTTCCGGCCTTGCCGACGTCGGGCCC
GTCGTGCAAACTTTTTTTTCCCACCCAGAGGTACAAGCCCAACTTCGTCT
CGATGCCGTGATCTGTGTCGTGGATGCCTTCAGCCTCTCCAGGGTCCTCA
GTCGGGAGGGAGAGCGGGAGGCAGGGCCGGAGGAAGGGAGGGAGGAAGGG
GTGAAGGAAGGGGTGGAGGCGGCCTCTCTGGAGCTGATTGCTGAACAGTT
AGCCTTGGCGGACCGAGTGCTGTTGAACAAGATGGACTTGCTGGAAGCAG
CGAAGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGTGAGGAAGCGGGTA
CAGGCATATGTAGAGAGTTATGCGCCGGAGGCCGTTCTATTGGCATGCGT
GAGGGGAGAAGTGCCCTTGGAGGAGGTATTGGGGCTGGAGGCCTTCTCGC
CGTCCCGAACTTTCCAGGGCGAGAAGGAAAGCAAGGGGAAGAAATGGATG
GACGGGGGGGCCGATGGAGGGGAGTTCGCCGTGGGAGGGAGGGCGGGAGG
GAGGGCGGGAGGGGGGGCGGGCCACGCTCACACCAGGTTGGGGTTCACCT
CCATCGGGTTGACCATCGACGACGGACCGTTGGAGTGGACGGCGTTTGAA
AGCTGGCTTGAACAAACCTTAAGTGCGACCAAGTCGACGGGCTCCGGGAG
CCGCGGGCCGGCTGGGGACTTGAGGGAGGAAGGGCAGCGCGGGGATGGGA
GGGAGGTCTCAAAGGAGCCACCGCAGGAGGGCTCGGCCCTGCGACAAGAG
CAGGGGGAGGGGCAAGTGATTGTCCGTACCAAGGGGGTGTTGTGGGTGAC
AAAGAAGACTCCGTACAGGCGGGCCACCGTGGTGGAAAAACGCGTGGTGC
TGCAGGGCATCTACGGTCACCTGGAGATGAGGGAGGAGGAGGGTGATATG
GCCTCGGGTCATTTTCCTCTAGTCTCAAAGTTGGTGTTTATCGGACTGTT
CAAGGACCCGGTGGCCATGAAGCGCAATATGGAAGGTGCGCTGTTGGAGT
GCTTGGCGCCGGGGTGGTATGCAAAGAGGAGGGAATGAGGAAGGACGGGG
ACAGGGGGAGTCTGGGGGGAGGGAGAGATGGGTAGCAATCAATCATCAAT
AGCTGTATGTATGTGTATGTGTGAATATGGCAACGCCGAAAGAACAAACT
CGTGTGGTCTGAAAACTGAGAAGTCCGCCCTCGTTCTTTTCCTCGA back to topprotein sequence of rna7124 >rna7124-protein ID=rna7124-protein|Name=rna7124|organism=Nannochloropsis gaditana|type=polypeptide|length=330bp
MNPPRVSSPPSPPPCEETPFAHSPPRSQIDRPESIAYTPHAWCCRRRCHL
QGGILVLWLVVVILIAVDYSPAGHRHVARVLSTFLEWVGRHPLRGAMAFA
AVYALSVVFFVPGAALTLGGGFLFGQALGVGPGTVFASLAVFVGASAGAV
AAFSLGRWLLHETAQSTLNRYTILRALDASLHGHRGLKIVLLLRLSPLVP
FTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREAGGES
SVERGVKIAMYVVGAVALVAAVGVLSRFAREELRKIQDEGEGARGEGRDV
EGGGEGEVKEVGRGREEKQEVEREKEAEER back to topmRNA from alignment at CM002470.1:503827..504905- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7124 ID=rna7124|Name=rna7124|organism=Nannochloropsis gaditana|type=mRNA|length=1079bp|location=Sequence derived from alignment at CM002470.1:503827..504905- (Nannochloropsis gaditana)
TTTAACTGTACAGACACGTGTTGACACAACACTCGTATGGCCACAGGGAG
CAAATATCAGGTACCATCAAGACTGTGTCTGGTCGAATGAACCCTCCTAG
AGTCTCCTCCCCACCCTCTCCCCCGCCGTGCGAAGAAACGCCTTTTGCAC
ATTCGCCTCCCCGTTCCCAGATTGATCGACCGGAAAGCATTGCCTACACA
CCGCACGCCTGGTGCTGTCGTCGACGCTGCCATCTCCAGGGTGGAATTCT
CGTCCTTTGGTTGGTTGTGGTCATCTTAATCGCAGTGGATTACTCACCAG
CAGGCCATCGGCACGTGGCTCGAGTACTTTCCACTTTCTTGGAATGGGTA
GGCCGCCACCCTCTCAGAGGGGCCATGGCATTTGCAGCCGTCTACGCCTT
GAGCGTCGTTTTCTTCGTGCCTGGAGCCGCTTTGACCTTGGGGGGGGGGT
TTCTCTTCGGACAAGCACTGGGCGTGGGGCCCGGTACGGTCTTTGCCTCG
CTCGCAGTCTTTGTGGGGGCGAGTGCGGGGGCCGTGGCCGCATTCAGCCT
CGGCCGATGGCTTTTGCATGAAACAGCCCAGTCCACGCTGAACCGGTACA
CTATACTACGGGCCTTGGACGCCTCCTTGCACGGGCACCGGGGCTTGAAA
ATCGTGCTCCTCCTGCGTCTATCGCCCCTCGTCCCCTTTACCGCCCTGAA
TTACATGATGAGCGTCACCTCCGTGTCCCTAAAGACGTACACTCTGGGCC
TGGTGGGGATGGTACCGGCCGTCGTCGCCTACTCGTTCCTGGGGACCACG
GCGGGGGGCTTGACCAGGGAGGCAGGGGGGGAGAGCTCGGTGGAGAGAGG
GGTGAAGATTGCGATGTACGTGGTGGGAGCAGTGGCCTTGGTGGCTGCTG
TAGGCGTGCTTTCTCGGTTCGCGAGGGAAGAATTGCGGAAAATTCAGGAT
GAGGGGGAGGGGGCGCGGGGGGAGGGGAGAGACGTGGAGGGAGGGGGGGA
GGGAGAGGTGAAGGAGGTGGGAAGAGGGAGGGAGGAAAAGCAGGAGGTAG
AGAGGGAGAAAGAAGCGGAGGAAAGATAG back to topCoding sequence (CDS) from alignment at CM002470.1:503827..504905- >rna7124 ID=rna7124|Name=rna7124|organism=Nannochloropsis gaditana|type=CDS|length=993bp|location=Sequence derived from alignment at CM002470.1:503827..504905- (Nannochloropsis gaditana)
ATGAACCCTCCTAGAGTCTCCTCCCCACCCTCTCCCCCGCCGTGCGAAGA
AACGCCTTTTGCACATTCGCCTCCCCGTTCCCAGATTGATCGACCGGAAA
GCATTGCCTACACACCGCACGCCTGGTGCTGTCGTCGACGCTGCCATCTC
CAGGGTGGAATTCTCGTCCTTTGGTTGGTTGTGGTCATCTTAATCGCAGT
GGATTACTCACCAGCAGGCCATCGGCACGTGGCTCGAGTACTTTCCACTT
TCTTGGAATGGGTAGGCCGCCACCCTCTCAGAGGGGCCATGGCATTTGCA
GCCGTCTACGCCTTGAGCGTCGTTTTCTTCGTGCCTGGAGCCGCTTTGAC
CTTGGGGGGGGGGTTTCTCTTCGGACAAGCACTGGGCGTGGGGCCCGGTA
CGGTCTTTGCCTCGCTCGCAGTCTTTGTGGGGGCGAGTGCGGGGGCCGTG
GCCGCATTCAGCCTCGGCCGATGGCTTTTGCATGAAACAGCCCAGTCCAC
GCTGAACCGGTACACTATACTACGGGCCTTGGACGCCTCCTTGCACGGGC
ACCGGGGCTTGAAAATCGTGCTCCTCCTGCGTCTATCGCCCCTCGTCCCC
TTTACCGCCCTGAATTACATGATGAGCGTCACCTCCGTGTCCCTAAAGAC
GTACACTCTGGGCCTGGTGGGGATGGTACCGGCCGTCGTCGCCTACTCGT
TCCTGGGGACCACGGCGGGGGGCTTGACCAGGGAGGCAGGGGGGGAGAGC
TCGGTGGAGAGAGGGGTGAAGATTGCGATGTACGTGGTGGGAGCAGTGGC
CTTGGTGGCTGCTGTAGGCGTGCTTTCTCGGTTCGCGAGGGAAGAATTGC
GGAAAATTCAGGATGAGGGGGAGGGGGCGCGGGGGGAGGGGAGAGACGTG
GAGGGAGGGGGGGAGGGAGAGGTGAAGGAGGTGGGAAGAGGGAGGGAGGA
AAAGCAGGAGGTAGAGAGGGAGAAAGAAGCGGAGGAAAGATAG back to top
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