|
|
Properties
| Property Name | Value |
|---|
| Product | la-related protein 4b |
| Orig transcript id | gnl|cribi|Naga_100610g1.2613.mrna |
| Orig protein id | gnl|cribi|Naga_100610g1.2613 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:477645..479035 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7111 ID=rna7111|Name=rna7111|organism=Nannochloropsis gaditana|type=mRNA|length=1209bp
ATGTACTTTTTCTCTTCCCGAGGCCCAGGATCAAGGCGTGTCGTTGAACA
CGTCCTCAAGGCCAGTGCCTGTATAACCGCAGCCGCGGGTGTCATGGCGC
TGACCACGCCTTACTATTCGGCGGAGAACGGAAAGCGAGGGACCCCGGGT
TCCTCCTTTTATTTTTCCTCTCCGTGCCGTGGCCCCGCCCGGGCGCAAGG
TCATCCTGCTTGGGTGCACTCGTCCGAGGAGGAGGAGGAAAGAGGGACGA
CCAATGATGACGAGAAACACCGTCGCTTCTATAGGCCGCCGTACAACCGG
TCAGGGGACAAGGGGGAAAGGGGAGGGGGGGGAGGCAAGCGGATGGGCCA
TGGGAACTTGCGCCACGGGATGCACAGCCACACGGACGAGGTGGTGGAAG
GTTTCGCAGGCACGGTGGGGAACACCCCCTTGGTGGAAATCAAGTCCCTC
TCTCGGATCACGGGCTGCCGCATCCTCGCCAAGGCCGAGCACCTGAACCC
TTCCGGGAGTATCAACGATCGGGCGGCTGTGTATATGGTGGAGGACGCGG
AACGGAAAGGGCGGCTCCGGCCCGGGGGCGTGATCGTGGAGGGAACTCGA
GGGAACACTGGGATCAGCCTCGCCTTGGCGAGCCTCGCGAAAGGCTACCA
ATGCGTCCTCGTCGTCCCCGACAGCGTTTCGGCCGTTAAAGTGGATTTGA
TGCGGGCCTACGGAGCGCATGTTCACGTCCAGCCCTCCGTGCCGCTCTCG
GATTCCCGGCATTTCTACCACAAGGCGGCGGCTTTAGCCCAAGAACTCAG
AGAGGCGCAAGCCGCTGCTTTGCAGTCCTTTCAGGCCCATCACCAGGGTC
TGAGGGTCGAGGAGGAGGAGGAAGAGGAAGAGGAGGCGGAGGCGGAGGAG
GAGGAGGCAGGAGTGACGGGAAGCAAGGAGGGAGACCGGGCGGGAGGTGT
GGAAGGGGCGGGGGGGAGGGACGAGTCGGTGGAGGAAAGGAGGGAGGTGC
CATCGGAGGGTTGGGAGGAGGGACCAGGGCCTCTGCGTCTCCGCCGGCAC
ATGCCCAAGATCGTGCATTTGGATCAGTACGAGAATTTGGCGAATTTCAA
AGCCCATTTCGAGGGTACGGGGCCCGAAATTTGGCGGCAGGTCGGGCACA
AGATCGACGCCTTTGTCTCCGGGGCCGGGACAGGGGGTACACTGGCAGAC
GACGAGTAA back to topprotein sequence of rna7111 >rna7111-protein ID=rna7111-protein|Name=rna7111|organism=Nannochloropsis gaditana|type=polypeptide|length=377bp
MSVEAAAILEKKTQDSAAPATSASSPDMSPNRDKDNAAGGTEHDERSGSE
NGEGLEAVGGEGPAIQVSEGTPGVKKGLGEVAPITNGFHGGSTATTTVNG
AVEGEAKPGAASRLPSAAGTHEGDVRAVRQALEHYLSLAYLRADQGFLAS
YMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRP
NIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVG
LEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFLAGEGVGTDGGD
EGGRYARQGGDPTPTPPGRKGGKGGGGGGGGGLMNGSVAHPYHADQYQAT
PQAHLPPLPSQDLDRGGPYPPALRGPP back to topmRNA from alignment at CM002470.1:477645..479035- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7111 ID=rna7111|Name=rna7111|organism=Nannochloropsis gaditana|type=mRNA|length=1391bp|location=Sequence derived from alignment at CM002470.1:477645..479035- (Nannochloropsis gaditana)
CCATTCGTGATCCATACACACCGCAGCAGGTAACAAAAATTGTCAAAATT
CTGCACTCTGTTGGCTTCGAACAGAATTTCGGACATCGATATAGAGGAGG
GGCACCCGACACGAGGGTAAGGGAGGGTCTGCGGAGTTCGCGGCGGGGAA
ACGAAATTTCCTCCGTGCTCTGCTCCGGTACTTTCCTTTTTGCGCGGTTC
TTGGGCGTCCTAGGCCAAGCGGCGAGAGCAAACCACACCTTGACAAGTGC
GTGAACTTGATGAGCGTGGAAGCAGCGGCCATACTGGAAAAGAAGACCCA
AGACAGCGCTGCCCCTGCCACGAGTGCCAGTAGCCCCGACATGTCTCCCA
ATCGGGACAAGGACAACGCGGCGGGCGGCACGGAGCACGACGAGCGAAGC
GGCAGTGAAAATGGAGAGGGACTTGAAGCCGTGGGTGGGGAAGGTCCTGC
CATCCAGGTATCGGAAGGGACGCCCGGGGTCAAGAAGGGGTTGGGGGAGG
TGGCCCCCATCACGAACGGGTTCCACGGAGGGAGCACGGCAACGACGACC
GTCAATGGCGCGGTGGAGGGTGAGGCCAAGCCAGGCGCAGCGTCTCGTTT
GCCGTCCGCGGCGGGGACGCACGAGGGGGACGTCAGAGCGGTGCGGCAGG
CCTTAGAACATTACCTCTCATTGGCCTACCTGCGGGCGGACCAAGGCTTT
TTGGCTTCGTACATGAACCCGCAAATGTTCATTCCCCTCTCCGTCCTCGT
CACCCTTCCGGCCCTCGCAGCCCTCTCTCCCTCCCTTTCCCTGGTGGTGG
CGGCGCTCAAGGACCATCCCACGTTGACTTTGAACGAGGAGCAATCCAGC
GTCCGACCCAACATCCACGTACCCCGGACGACGGTAATATTGCGCGAAAT
TAGCAGCGAGACTCCGGAAGAGGAGATCCGCTCCCAGCTTCTGGGATGGG
AGGGGTGCCCCGAGATCAAGAGTCTTCGGAAGGACGTGGGCGACACCTGG
TTTGTAGGTCTGGAGGATGAAGGCGCGGCGAAATGGATTTTGGAAAGATT
GCGCGAACGCCTTTGGCATGGGAAACCCATCCGAGCCCGGCTCAAGTCCG
AGAACGTGGTGAACAAGGCGTTCTTGGCCGGAGAAGGAGTGGGGACGGAC
GGGGGGGACGAAGGTGGGAGGTATGCCCGGCAGGGGGGCGATCCGACGCC
GACTCCACCGGGGCGCAAGGGAGGGAAAGGGGGGGGAGGAGGTGGTGGTG
GGGGTCTTATGAATGGGAGTGTCGCACATCCATACCATGCAGACCAGTAC
CAGGCGACTCCGCAGGCTCACTTACCGCCTCTTCCGTCGCAAGACCTGGA
CCGGGGGGGTCCCTACCCGCCCGCCCTCCGCGGCCCCCCCC back to topCoding sequence (CDS) from alignment at CM002470.1:477645..479035- >rna7111 ID=rna7111|Name=rna7111|organism=Nannochloropsis gaditana|type=CDS|length=1132bp|location=Sequence derived from alignment at CM002470.1:477645..479035- (Nannochloropsis gaditana)
ATGAGCGTGGAAGCAGCGGCCATACTGGAAAAGAAGACCCAAGACAGCGC
TGCCCCTGCCACGAGTGCCAGTAGCCCCGACATGTCTCCCAATCGGGACA
AGGACAACGCGGCGGGCGGCACGGAGCACGACGAGCGAAGCGGCAGTGAA
AATGGAGAGGGACTTGAAGCCGTGGGTGGGGAAGGTCCTGCCATCCAGGT
ATCGGAAGGGACGCCCGGGGTCAAGAAGGGGTTGGGGGAGGTGGCCCCCA
TCACGAACGGGTTCCACGGAGGGAGCACGGCAACGACGACCGTCAATGGC
GCGGTGGAGGGTGAGGCCAAGCCAGGCGCAGCGTCTCGTTTGCCGTCCGC
GGCGGGGACGCACGAGGGGGACGTCAGAGCGGTGCGGCAGGCCTTAGAAC
ATTACCTCTCATTGGCCTACCTGCGGGCGGACCAAGGCTTTTTGGCTTCG
TACATGAACCCGCAAATGTTCATTCCCCTCTCCGTCCTCGTCACCCTTCC
GGCCCTCGCAGCCCTCTCTCCCTCCCTTTCCCTGGTGGTGGCGGCGCTCA
AGGACCATCCCACGTTGACTTTGAACGAGGAGCAATCCAGCGTCCGACCC
AACATCCACGTACCCCGGACGACGGTAATATTGCGCGAAATTAGCAGCGA
GACTCCGGAAGAGGAGATCCGCTCCCAGCTTCTGGGATGGGAGGGGTGCC
CCGAGATCAAGAGTCTTCGGAAGGACGTGGGCGACACCTGGTTTGTAGGT
CTGGAGGATGAAGGCGCGGCGAAATGGATTTTGGAAAGATTGCGCGAACG
CCTTTGGCATGGGAAACCCATCCGAGCCCGGCTCAAGTCCGAGAACGTGG
TGAACAAGGCGTTCTTGGCCGGAGAAGGAGTGGGGACGGACGGGGGGGAC
GAAGGTGGGAGGTATGCCCGGCAGGGGGGCGATCCGACGCCGACTCCACC
GGGGCGCAAGGGAGGGAAAGGGGGGGGAGGAGGTGGTGGTGGGGGTCTTA
TGAATGGGAGTGTCGCACATCCATACCATGCAGACCAGTACCAGGCGACT
CCGCAGGCTCACTTACCGCCTCTTCCGTCGCAAGACCTGGACCGGGGGGG
TCCCTACCCGCCCGCCCTCCGCGGCCCCCCCC back to top
|