EWM23576.1, cds7094 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|585104712|gb|EWM23576.1| (la-related protein 4b, partial [Nannochloropsis gaditana]) HSP 1 Score: 756.133 bits (1951), Expect = 0.000e+0 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0
Query: 1 MSVEAAAILEKKTQDSAAPATSASSPDMSPNRDKDNAAGGTEHDERSGSENGEGLEAVGGEGPAIQVSEGTPGVKKGLGEVAPITNGFHGGSTATTTVNGAVEGEAKPGAASRLPSAAGTHEGDVRAVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFLAGEGVGTDGGDEGGRYARQGGDPTPTPPGRKGGKGGGGGGGGGLMNGSVAHPYHADQYQATPQAHLPPLPSQDLDRGGPYPPALRGPP 377
MSVEAAAILEKKTQDSAAPATSASSPDMSPNRDKDNAAGGTEHDERSGSENGEGLEAVGGEGPAIQVSEGTPGVKKGLGEVAPITNGFHGGSTATTTVNGAVEGEAKPGAASRLPSAAGTHEGDVRAVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFLAGEGVGTDGGDEGGRYARQGGDPTPTPPGRKGGKGGGGGGGGGLMNGSVAHPYHADQYQATPQAHLPPLPSQDLDRGGPYPPALRGPP
Sbjct: 1 MSVEAAAILEKKTQDSAAPATSASSPDMSPNRDKDNAAGGTEHDERSGSENGEGLEAVGGEGPAIQVSEGTPGVKKGLGEVAPITNGFHGGSTATTTVNGAVEGEAKPGAASRLPSAAGTHEGDVRAVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFLAGEGVGTDGGDEGGRYARQGGDPTPTPPGRKGGKGGGGGGGGGLMNGSVAHPYHADQYQATPQAHLPPLPSQDLDRGGPYPPALRGPP 377
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|970660433|gb|KUF97983.1| (Ammonium Transporter (Amt) Family [Phytophthora nicotianae]) HSP 1 Score: 139.813 bits (351), Expect = 1.825e-34 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ +L+V A++D +LN + +++PNI RTT+ILREI S T EE+ + +EGC ++ S+R DVGDTWFV + E A L LR + ++G PI+ARLKSENV+ K+F
Sbjct: 17 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAI---FEGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVL-KSFY 174
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|301093766|ref|XP_002997728.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262109977|gb|EEY68029.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 140.584 bits (353), Expect = 2.213e-33 Identity = 67/163 (41.10%), Postives = 105/163 (64.42%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ + +L+V A+++ +LN + +++PNI RTT+ILREISS T EE+ + +EGC ++ S+R DVGDTWFV + E A L LR + ++G I+ARLKSENV+ K+F
Sbjct: 17 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKITQLTDNTALLVEAVQESTVCSLNSSKDAIKPNIKSERTTIILREISSSTKPEEVEAI---FEGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVL-KSFY 174
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|675196723|ref|XP_008907246.1| (hypothetical protein PPTG_13373 [Phytophthora parasitica INRA-310] >gi|566021049|gb|ETI43960.1| hypothetical protein F443_11248 [Phytophthora parasitica P1569] >gi|567958423|gb|ETK84012.1| hypothetical protein L915_10962 [Phytophthora parasitica] >gi|567987109|gb|ETL37421.1| hypothetical protein L916_10859 [Phytophthora parasitica] >gi|568016407|gb|ETL90584.1| hypothetical protein L917_10765 [Phytophthora parasitica] >gi|568046783|gb|ETM43888.1| hypothetical protein L914_10800 [Phytophthora parasitica] >gi|568092684|gb|ETN07489.1| hypothetical protein PPTG_13373 [Phytophthora parasitica INRA-310] >gi|570324698|gb|ETO72646.1| hypothetical protein F444_11307 [Phytophthora parasitica P1976] >gi|570948514|gb|ETP13771.1| hypothetical protein F441_11163 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 139.043 bits (349), Expect = 1.226e-32 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ +L+V A++D +LN + +++PNI RTT+ILREI S T EE+ + +EGC ++ S+R DVGDTWFV + E A L LR + ++G PI+ARLKSENV+ K+F
Sbjct: 76 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAI---FEGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVL-KSFY 233
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|570981428|gb|ETP41839.1| (hypothetical protein F442_11155 [Phytophthora parasitica P10297]) HSP 1 Score: 139.043 bits (349), Expect = 1.275e-32 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ +L+V A++D +LN + +++PNI RTT+ILREI S T EE+ + +EGC ++ S+R DVGDTWFV + E A L LR + ++G PI+ARLKSENV+ K+F
Sbjct: 76 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAI---FEGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVL-KSFY 233
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|970633468|gb|KUF79126.1| (La-related protein 4 [Phytophthora nicotianae]) HSP 1 Score: 137.887 bits (346), Expect = 6.221e-32 Identity = 68/163 (41.72%), Postives = 104/163 (63.80%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ +L+V A++D +LN + +++PNI RTT+ILREI S T EE+ + +EGC ++ S+R DVGDTWFV + E A L LR + ++G PI+ARLKSENV+ K+F
Sbjct: 272 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAI---FEGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVL-KSFY 429
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|695373127|ref|XP_009514974.1| (hypothetical protein PHYSODRAFT_554114 [Phytophthora sojae] >gi|348687885|gb|EGZ27699.1| hypothetical protein PHYSODRAFT_554114 [Phytophthora sojae]) HSP 1 Score: 135.576 bits (340), Expect = 1.747e-31 Identity = 66/163 (40.49%), Postives = 103/163 (63.19%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
A+++ +E Y S A L A+ +L S MN QM++P+ V++ + L+ +L+V A++D +LN + +++PNI RTT+ILREI S T EE+ + ++GC ++ S+R DVGDTWFV + E A L LR + ++G I+ARLKSENV+ K+F
Sbjct: 33 AIKRQVEFYFSRANL-ANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDAALLVEAVQDSTICSLNSAKDAIKPNIKSERTTIILREIPSSTKPEEVEAI---FDGCGKVASVRSDVGDTWFVTMNTEAEAVSTLLALRSKTFNGAAIKARLKSENVL-KSFY 190
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|1173945774|gb|OQR94367.1| (hypothetical protein ACHHYP_01407 [Achlya hypogyna]) HSP 1 Score: 133.65 bits (335), Expect = 2.416e-31 Identity = 67/162 (41.36%), Postives = 99/162 (61.11%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAF 288
A+++ +E Y S A L D +L S MN QMF+P+ V++ + ALS +LVV A++D +LN+E+++++PN+ R T+ILREI S T E+ + + GC + S+R DVGDTWFV L E A L LR + ++ PI+ARLKSEN+ F
Sbjct: 17 ALKKQVEFYFSKANLATD-SYLVSQMNAQMFVPIDVILGFAKVKALSEDAALVVEAIEDSQICSLNDEKNAIKPNVKSERNTIILREIPSATEPAEVEAI---FAGCGAVTSVRSDVGDTWFVTLASEEEAVNTLLALRNKTFNNAPIKARLKSENLFKSFF 174
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|673037988|ref|XP_008872955.1| (hypothetical protein H310_08825 [Aphanomyces invadans] >gi|574471751|gb|ETV98758.1| hypothetical protein H310_08825 [Aphanomyces invadans]) HSP 1 Score: 134.035 bits (336), Expect = 2.856e-31 Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 0
Query: 116 SAAGTHEGDV--RAVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAFL 289
S A T GD A++ +E Y S A L D FL S MN QM++P+ V+V + AL+ ++LVV ++KD +L+ E +++PNI R T+ILREI S T +++ + +EGC + S+R DVGDTWFV + E A L LR + +H PI+ARLKSENV+ ++FL
Sbjct: 2 STAPTLSGDALKEALKSQVEFYFSKANLVNDT-FLVSQMNSQMYVPVDVIVGFSKIKALTTDVALVVDSIKDSTVCSLSPEGDAIKPNIKSERNTIILREIPSATDPKDVEAI---FEGCGTVASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVL-RSFL 172
BLAST of EWM23576.1 vs. NCBI_GenBank
Match: gi|299116309|emb|CBN76115.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.576 bits (340), Expect = 4.240e-31 Identity = 68/162 (41.98%), Postives = 101/162 (62.35%), Query Frame = 0
Query: 127 AVRQALEHYLSLAYLRADQGFLASYMNPQMFIPLSVLVTLPALAALSPSLSLVVAALKDHPTLTLNEEQSSVRPNIHVPRTTVILREISSETPEEEIRSQLLGWEGCPEIKSLRKDVGDTWFVGLEDEGAAKWILERLRERLWHGKPIRARLKSENVVNKAF 288
A+++ +E Y S L++D GFL S MN QM +P++V+ + L+ +L+V ++KD T+ + ++P+I R T+ILREI SETP+E+IR G +G IKS+R DVGDTWFV +E E A + LR + + GK I+ARLKSEN++ F
Sbjct: 72 ALKKQVEFYFSKQNLQSD-GFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSD--GIKPSIKQERNTIILREIPSETPQEKIREIFTG-DGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFF 229 The following BLAST results are available for this feature:
BLAST of EWM23576.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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