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Properties
| Property Name | Value |
|---|
| Product | uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100139g5.4740.mrna |
| Orig protein id | gnl|cribi|Naga_100139g5.4740 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:427589..429907 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7093 ID=rna7093|Name=rna7093|organism=Nannochloropsis gaditana|type=mRNA|length=1427bp
CACTTTGACACTTCCGCCCCCGACGCTGACACGTTCTGCGTAGAATGACA
CGTAAATATGGCCGTCTTTCAGGAAGCATAGTCCAGGAGGGGGTGGCCTC
AGAACGCGTGGGGTGTATTAAACGGGCCTCAGTGATCGACTTTGCGTCGC
GTGGCGCCTAGATGGCCACGTCAGCAAACATAGACGTGATACCAAAGGGT
TGGATATTTTATGTCACGTGGCTGTGGAAAGGCGCCTTCAAGCGACCTCG
CACTCTTACTTTGTGAGCCTTGGTCCCCGCAGTGGATAGCACGCATGTGT
CTTTTGCCTTCTTCCGTAGCCCAATTCGTACAAAGGGGCTGAAATTGTGG
GCCATTCTGGATAGGGGTTCTTGGGAGGATGACCTCCCACCCTACTGCTT
GTACTGAAGGTTATGAGCGGGCAACGTCGTCGAGGACCTGCGCACCAGAA
TACATTCGCGTTTCGACACAATCCCAAGAGCAAGAAAACCGAGCGCATCC
TAGCGTCTCCGATTGAGGGTCTCTGTCACCGATGCCATGAAAAAGTAGAA
TGGCGAAAAAAATATAGGAAATACAAGCCACTTAGCGCCCCTGCAACATG
CACCGGCTGTCACACCAAGAGTGTCCGTGCGGCGTACCACCAAATTTGTG
ACCCGTGCGCTGAAAAGCGCGCCGTCTGCGCAGGTTGCGCTGAGCCCAAG
TCGATTGTCAAGAAGACAGGAGCGGCTGCAGAAAAGGACGTGGAGGAGAA
GCGCCGGGCGTTAGAGAGAGACATAAAAGGGTTACATTTGCGAAAGCAGC
GCAAAATTCTGAGAGAATTTGATCGGTCGGGCGGAGATATGGATGTGGAA
GGTGCTATGGAGGCGGTGGGATCGGACCTCGATGACGACGAAATAGGAGA
TAGCGACGACAAAGAATATGATGAGGATTCGGAAAGAGAGTGAGGGAGCG
AGATATGGGGCAGGAGGGAAGGAATGGACGCCTCAAATGCGGAAAGTGTT
GAGCATTGTGTTTAAAGGACGAGGGCTGAAAGGACGAGGGCTGAGAGTAT
ACACCTAGACTAGAACTTGTAATTAAACGGCTGAAAGTATCATCAAATGA
GGCGATCTCTATGTTGAAAATGTCGATTGTAGATCCAGGGAGGATGACGA
CCACCTCTTGAAGGCACACGTGGTATCGAATTGTTACATTCTTTTTACAG
GGTGTGTTGCCGGCATTATTAATGGAAGAAGACGTGGGATCAAAGAACTA
TGCCTTCATGTGGTACCTGATCAAGGAGCCCACAGTTGGATACTACAGAG
CTCTTCTTCCAAAAAGCTCTCCATGCAAGGGACCCCTTGACAAGCCCAGG
ATTCATTCCTAAGAGACCTTCCGTGACAATCCATTATATGTCATATTCTA
GCAATGTCAGTGGTTGGCCGAATGTCT back to topprotein sequence of rna7093 >rna7093-protein ID=rna7093-protein|Name=rna7093|organism=Nannochloropsis gaditana|type=polypeptide|length=424bp
MGSVVGKSVPNTPAFTSPLIYSLISTTRHVVCTAKEAQLIASIGVVSPVD
NGKKNSSSSHISTGSSSSSSSSSSSSSSMSGDIRSRDSRRAVKEDGPDDD
EGEVAENDKTGKEAEEELNRISRKEEGDKGGWGGGRRRLGRRRAPAFAMG
MTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDF
HVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPS
PSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKEGCAI
LDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLK
VGKVYRLLPTEAPEDFDVVSATYLGPSPLQETLELPPVKGKEGGAGGPKE
GKKEGEEEGEQGDDGREHDKEGTR back to topmRNA from alignment at CM002470.1:427589..429907+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7093 ID=rna7093|Name=rna7093|organism=Nannochloropsis gaditana|type=mRNA|length=2319bp|location=Sequence derived from alignment at CM002470.1:427589..429907+ (Nannochloropsis gaditana)
CGCATTGCCTTGAGGTGCTCGTATCAGGACATAACACAGATTAGTGTGTC
TCTGAATGACAAGTcatttctttctcttgcAATTTTCTTCAATTGTACAG
ATACGCATCCGGAACCTTTCTCTGAGCAAGCAATTGGCTTTGAAAGGAAC
CACCCggttgaaggagggtggtggtagCGGCAAGTCGGCAACGAGACCGG
ACAGGGCTGCAGCATGGGGTCCGTCGTAGGCAAGAGTGTCCCGAACACTC
CAGCATTTACCAGTCCTTTGGTGAGTCTCAGAAGGGAATAGTGTCCTGTG
ACCTTCAAGCCGTTccattcctgtcctccatTCGAAGTTTACGCATTTTG
GCCGATATTCGTTTTTTAATCCTTGACCTGGCTCCTCCTACCCACGTCCA
CAGATATATTCCTTGATCAGTACCACGCGCCATGTGGTATGTACAGCTAA
GGAAGCGCAATTGATCGCGAGTATAGGAGTTGTAAGTCCTGTTGATaatg
gaaaaaagaacagcagcagcagccacatcAGCACtggtagcagcagcagc
agcagcagcagcagcagcagcagcagcagtatgAGTGGTGATATCCGAAG
CCGAGATAGCAGACGAGCGGTGAAAGAGGATGGGCCGGATGAtgacgaag
gagaagtggCCGAAAACGACaagacaggaaaagaagcggaagaagagctt
AACAGAATAAgtagaaaggaagagggagacaagggaggatggggaggagg
aaggaggaggctaggCAGACGGCGAGCACCCGCGTTCGCCATGGGCATGA
CGCAAGTGGCACCGATACAGAAAATCCTCGACCAGGTAGGGCGGGGCCGC
ACGTGGTGGAGACACTCGGGTGGGGCTTTGGTGTCTGCACAAGACGCAGG
ATAACTTTTTTCACACTCGTTCCGTCCTGTTccttttctcgccctcccat
ccctagATCGAACTCCACCACCTGGGCATGATAGCGCCCGTgcaccccca
cctccagcctCCCACCAGCCGTCCCTCGGAAATTCACTACCTGTgcttgc
tcgaggaggaagacttcCATGTCGgggtcttcgtcctcccgcccgaggcC
CGCATCCCTCTCCACGACCACCCCGGCATGTGCgttctctcccgcctcct
ctcagGCTCTCTCAACGTAAAGGACTTCGACTGGTGCGaacccccgtcct
cctccccgtcccccagcccctccccctcgtcctcgagcttcctccgcgcc
cggGGGTACGCCCggctcacctcctccctctggctCGAAGAACCCACgac
gctctccctcttcgacaCCCGCAACAACCTGCACGAATTCCacgccggga
aggagggttgcGCCATCCTTGACGTCCTGATTCCCCCCTACGACCCCATG
CGCGGCCGTCCCTGCAACTACTACCAGGTCCTTGATGAGGGGGCCccgga
aagaggaaggcggcgacggagggagggaaagggggcgacgaaggcgggag
ggagggagggcttgaaggtggggaaggtgTACAGACTTCTGCCCACCGAG
GCCCCTGAAGACTTCGATGTTGTGAGCGCCACGTACTTGGGGCCGTCCCC
CCTGCAGGAGACGCTGGAGCTGCCGCCAgtgaagggcaaggagggagggg
cgggggggccgaaggagggaaagaaggaaggggaagaggagggagagcaa
ggcgaCGACGGCAGGGAGCATGACAAAGAAGGGACGAGATAgcaaaggcg
gggaaggcgggaggtgTGATGCGTGAGGGAATGGAGccggggagacgagg
aggttggatagcagaggagaggggtggtCTGATTTGTTTGTACAGAGGCA
TTAATAGCGATTAGGGATTTGCAAGGGTGCGTCGTTTGGctgagcagcag
cagtagcagtGTGTGTCGTTTCTGAAATGCGACAAAGAGACTTTCCATCG
CCGTCCAGACCCCGGCCACGGAGCAACAACCGTGTCGGGGCCGACTTTTC
TATCGACAATACTCCACGAGTCTTGCAGACCCACCCGGAATGCTGCGTTG
AAAACCATATGGAGTGCCGTTGACGCAGCAATATAGCATAACCGTATCGA
AATCCACTGCTAGCGCCCGGCACCTTCTGGGAGTCAGGCATCGAACTAAA
GACAGGACGGCAGAGGGTCACGCATGACCTGGCGGCTTAAGACAAGGAAT
AGACGAGTCGCTcggagagggatgaggacggCGTGAGTTGAACAACGTTC
AACGCTCTCTTTTGGGTGACAAAAAAATCAAGTGCAGAAGGTCCTGAAAG
ATGTGAAGTTAGAGCCGTT back to topCoding sequence (CDS) from alignment at CM002470.1:427589..429907+ >rna7093 ID=rna7093|Name=rna7093|organism=Nannochloropsis gaditana|type=CDS|length=3825bp|location=Sequence derived from alignment at CM002470.1:427589..429907+ (Nannochloropsis gaditana)
ATGGGGTCCGTCGTAGGCAAGAGTGTCCCGAACACTCCAGCATTTACCAG
TCCTTTGATATATTCCTTGATCAGTACCACGCGCCATGTGGTATGTACAG
CTAAGGAAGCGCAATTGATCGCGAGTATAGGAGTTGTAAGTCCTGTTGAT
aatggaaaaaagaacagcagcagcagccacatcAGCACtggtagcagcag
cagcagcagcagcagcagcagcagcagcagcagtatgAGTGGTGATATCC
GAAGCCGAGATAGCAGACGAGCGGTGAAAGAGGATGGGCCGGATGAtgac
gaaggagaagtggCCGAAAACGACaagacaggaaaagaagcggaagaaga
gcttAACAGAATAAgtagaaaggaagagggagacaagggaggatggggag
gaggaaggaggaggctaggCAGACGGCGAGCACCCGCGTTCGCCATGGGC
ATGACGCAAGTGGCACCGATACAGAAAATCCTCGACCAGATCGAACTCCA
CCACCTGGGCATGATAGCGCCCGTgcacccccacctccagcctCCCACCA
GCCGTCCCTCGGAAATTCACTACCTGTgcttgctcgaggaggaagacttc
CATGTCGgggtcttcgtcctcccgcccgaggcCCGCATCCCTCTCCACGA
CCACCCCGGCATGTGCgttctctcccgcctcctctcagGCTCTCTCAACG
TAAAGGACTTCGACTGGTGCGaacccccgtcctcctccccgtcccccagc
ccctccccctcgtcctcgagcttcctccgcgcccggGGGTACGCCCggct
cacctcctccctctggctCGAAGAACCCACgacgctctccctcttcgaca
CCCGCAACAACCTGCACGAATTCCacgccgggaaggagggttgcGCCATC
CTTGACGTCCTGATTCCCCCCTACGACCCCATGCGCGGCCGTCCCTGCAA
CTACTACCAGGTCCTTGATGAGGGGGCCccggaaagaggaaggcggcgac
ggagggagggaaagggggcgacgaaggcgggagggagggagggcttgaag
gtggggaaggtgTACAGACTTCTGCCCACCGAGGCCCCTGAAGACTTCGA
TGTTGTGAGCGCCACGTACTTGGGGCCGTCCCCCCTGCAGGAGACGCTGG
AGCTGCCGCCAgtgaagggcaaggagggaggggcgggggggccgaaggag
ggaaagaaggaaggggaagaggagggagagcaaggcgaCGACGGCAGGGA
GCATGACAAAGAAGGGACGAGATAgATGGGGTCCGTCGTAGGCAAGAGTG
TCCCGAACACTCCAGCATTTACCAGTCCTTTGATATATTCCTTGATCAGT
ACCACGCGCCATGTGGTATGTACAGCTAAGGAAGCGCAATTGATCGCGAG
TATAGGAGTTGTAAGTCCTGTTGATaatggaaaaaagaacagcagcagca
gccacatcAGCACtggtagcagcagcagcagcagcagcagcagcagcagc
agcagcagtatgAGTGGTGATATCCGAAGCCGAGATAGCAGACGAGCGGT
GAAAGAGGATGGGCCGGATGAtgacgaaggagaagtggCCGAAAACGACa
agacaggaaaagaagcggaagaagagcttAACAGAATAAgtagaaaggaa
gagggagacaagggaggatggggaggaggaaggaggaggctaggCAGACG
GCGAGCACCCGCGTTCGCCATGGGCATGACGCAAGTGGCACCGATACAGA
AAATCCTCGACCAGATCGAACTCCACCACCTGGGCATGATAGCGCCCGTg
cacccccacctccagcctCCCACCAGCCGTCCCTCGGAAATTCACTACCT
GTgcttgctcgaggaggaagacttcCATGTCGgggtcttcgtcctcccgc
ccgaggcCCGCATCCCTCTCCACGACCACCCCGGCATGTGCgttctctcc
cgcctcctctcagGCTCTCTCAACGTAAAGGACTTCGACTGGTGCGaacc
cccgtcctcctccccgtcccccagcccctccccctcgtcctcgagcttcc
tccgcgcccggGGGTACGCCCggctcacctcctccctctggctCGAAGAA
CCCACgacgctctccctcttcgacaCCCGCAACAACCTGCACGAATTCCa
cgccgggaaggagggttgcGCCATCCTTGACGTCCTGATTCCCCCCTACG
ACCCCATGCGCGGCCGTCCCTGCAACTACTACCAGGTCCTTGATGAGGGG
GCCccggaaagaggaaggcggcgacggagggagggaaagggggcgacgaa
ggcgggagggagggagggcttgaaggtggggaaggtgTACAGACTTCTGC
CCACCGAGGCCCCTGAAGACTTCGATGTTGTGAGCGCCACGTACTTGGGG
CCGTCCCCCCTGCAGGAGACGCTGGAGCTGCCGCCAgtgaagggcaagga
gggaggggcgggggggccgaaggagggaaagaaggaaggggaagaggagg
gagagcaaggcgaCGACGGCAGGGAGCATGACAAAGAAGGGACGAGATAg
ATGGGGTCCGTCGTAGGCAAGAGTGTCCCGAACACTCCAGCATTTACCAG
TCCTTTGATATATTCCTTGATCAGTACCACGCGCCATGTGGTATGTACAG
CTAAGGAAGCGCAATTGATCGCGAGTATAGGAGTTGTAAGTCCTGTTGAT
aatggaaaaaagaacagcagcagcagccacatcAGCACtggtagcagcag
cagcagcagcagcagcagcagcagcagcagcagtatgAGTGGTGATATCC
GAAGCCGAGATAGCAGACGAGCGGTGAAAGAGGATGGGCCGGATGAtgac
gaaggagaagtggCCGAAAACGACaagacaggaaaagaagcggaagaaga
gcttAACAGAATAAgtagaaaggaagagggagacaagggaggatggggag
gaggaaggaggaggctaggCAGACGGCGAGCACCCGCGTTCGCCATGGGC
ATGACGCAAGTGGCACCGATACAGAAAATCCTCGACCAGATCGAACTCCA
CCACCTGGGCATGATAGCGCCCGTgcacccccacctccagcctCCCACCA
GCCGTCCCTCGGAAATTCACTACCTGTgcttgctcgaggaggaagacttc
CATGTCGgggtcttcgtcctcccgcccgaggcCCGCATCCCTCTCCACGA
CCACCCCGGCATGTGCgttctctcccgcctcctctcagGCTCTCTCAACG
TAAAGGACTTCGACTGGTGCGaacccccgtcctcctccccgtcccccagc
ccctccccctcgtcctcgagcttcctccgcgcccggGGGTACGCCCggct
cacctcctccctctggctCGAAGAACCCACgacgctctccctcttcgaca
CCCGCAACAACCTGCACGAATTCCacgccgggaaggagggttgcGCCATC
CTTGACGTCCTGATTCCCCCCTACGACCCCATGCGCGGCCGTCCCTGCAA
CTACTACCAGGTCCTTGATGAGGGGGCCccggaaagaggaaggcggcgac
ggagggagggaaagggggcgacgaaggcgggagggagggagggcttgaag
gtggggaaggtgTACAGACTTCTGCCCACCGAGGCCCCTGAAGACTTCGA
TGTTGTGAGCGCCACGTACTTGGGGCCGTCCCCCCTGCAGGAGACGCTGG
AGCTGCCGCCAgtgaagggcaaggagggaggggcgggggggccgaaggag
ggaaagaaggaaggggaagaggagggagagcaaggcgaCGACGGCAGGGA
GCATGACAAAGAAGGGACGAGATAg back to top
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