EWM23588.1, cds7076 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|585104729|gb|EWM23588.1| (uncharacterized protein Naga_100139g5 [Nannochloropsis gaditana]) HSP 1 Score: 858.596 bits (2217), Expect = 0.000e+0 Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 Query: 1 MGSVVGKSVPNTPAFTSPLIYSLISTTRHVVCTAKEAQLIASIGVVSPVDNGKKNSSSSHISTGSSSSSSSSSSSSSSMSGDIRSRDSRRAVKEDGPDDDEGEVAENDKTGKEAEEELNRISRKEEGDKGGWGGGRRRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKEGCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGPSPLQETLELPPVKGKEGGAGGPKEGKKEGEEEGEQGDDGREHDKEGTR 424 MGSVVGKSVPNTPAFTSPLIYSLISTTRHVVCTAKEAQLIASIGVVSPVDNGKKNSSSSHISTGSSSSSSSSSSSSSSMSGDIRSRDSRRAVKEDGPDDDEGEVAENDKTGKEAEEELNRISRKEEGDKGGWGGGRRRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKEGCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGPSPLQETLELPPVKGKEGGAGGPKEGKKEGEEEGEQGDDGREHDKEGTR Sbjct: 1 MGSVVGKSVPNTPAFTSPLIYSLISTTRHVVCTAKEAQLIASIGVVSPVDNGKKNSSSSHISTGSSSSSSSSSSSSSSMSGDIRSRDSRRAVKEDGPDDDEGEVAENDKTGKEAEEELNRISRKEEGDKGGWGGGRRRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKEGCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGPSPLQETLELPPVKGKEGGAGGPKEGKKEGEEEGEQGDDGREHDKEGTR 424
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|695370803|ref|XP_009514401.1| (hypothetical protein PHYSODRAFT_553795 [Phytophthora sojae] >gi|348687312|gb|EGZ27126.1| hypothetical protein PHYSODRAFT_553795 [Phytophthora sojae]) HSP 1 Score: 130.954 bits (328), Expect = 9.453e-32 Identity = 89/278 (32.01%), Postives = 128/278 (46.04%), Query Frame = 0 Query: 118 LNRISRKEEGDKGGWGGGRRRLGRRRAPAF-----------AMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTS-------RPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 LN + R G G++ L R + A+ ++AP++ I DQ+ P + L+ P S RP +HY + E+E F +G+F+LPP A IPLHDHPGM V+SR+L GSL++K +D + ++++ + + ARL + L P T L NLH G + GCA LD++ PPYD GR C Y++V+D EGK T L T P DFDV++ YLGP Sbjct: 4 LNAVWRFSVGGDKDLAAGQQALERIQQLLVTAIAKYDGEPHALTREEIAPVKAICDQL--------FPANFQLKVPGSDDDGAPERPKHVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMTVVSRMLYGSLHIKSYDLVK----------DGATTAAVGKKVTARLQADEVLTAPHTTELLPDCGNLHHLVGGDDTGCAFLDIITPPYDSNDGRDCTYFRVVDSA---DSHENNSEGKLVT----------------LETFNPLDFDVLTEPYLGP 244
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|1214681156|gb|OWZ00041.1| (hypothetical protein PHMEG_00028853 [Phytophthora megakarya]) HSP 1 Score: 127.102 bits (318), Expect = 1.745e-30 Identity = 80/246 (32.52%), Postives = 117/246 (47.56%), Query Frame = 0 Query: 137 RRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPP-----TSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 + + + + A A+ ++API+ I DQ+ PV+ LQ P RP +HY + E+E F +G+F+LPP IPLHDHPGM V++RLL GSL+VK +D + ++ L R AR+ + + P T L NLHE G + GCA D++ PPYD GR C Y++V+D E +L + P +FDV++ TY GP Sbjct: 34 KAIAKDQDGAHALTAEEMAPIKTICDQL--------FPVNFQLQVPGPESGIERPKRVHYQHVYEDETFSIGIFILPPGVAIPLHDHPGMSVVTRLLYGSLHVKSYDLVQIDAAP------------LGKRQMARIRADEVVTAPHTAELLPDCGNLHELVGGDDVGCAFFDIITPPYDANEGRDCTYFRVVDSPQQESNDEE---------------------LVMLESYEPHEFDVLTKTYHGP 238
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|669161328|ref|XP_008616226.1| (hypothetical protein SDRG_11950 [Saprolegnia diclina VS20] >gi|530732131|gb|EQC30373.1| hypothetical protein SDRG_11950 [Saprolegnia diclina VS20]) HSP 1 Score: 123.635 bits (309), Expect = 4.075e-29 Identity = 87/265 (32.83%), Postives = 119/265 (44.91%), Query Frame = 0 Query: 133 GGGRRRLGRRRAPAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLW----------------LEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGPSPLQ 380 GGGR R A+ + ++ PI+ + D I H+G+ P + I Y+ + E+ D +G+FVLPP A IPLH+HP M V+SRLL GSL+V +D P+ ++ +F A S+W ++ P T L + NLHEF +G + GCAILDVL PPYDP RGR C YY+V P AT A P FD+V+ Y GP L+ Sbjct: 16 GGGRGR---------ALSLQEIEPIKALCDAILPIHVGLDVPTPATAETLYRGSKAIRYIHIYEDRDVSIGIFVLPPGATIPLHNHPDMSVVSRLLYGSLHVTAYDLV----------PAEANDAFWAAHDPGDDPPSIWRRKKKLLLAQQRQDRTVQAPYTTELLPHKGNLHEFTSGSDIGCAILDVLTPPYDPSRGRDCTYYRVAAALEPTPDDSDPIVALEATPA------------------PPHSFDIVNLAYHGPPVLE 243
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|568036342|gb|ETM33954.1| (hypothetical protein L914_18856 [Phytophthora parasitica]) HSP 1 Score: 121.709 bits (304), Expect = 1.962e-28 Identity = 88/274 (32.12%), Postives = 125/274 (45.62%), Query Frame = 0 Query: 116 EELNRISRKEEGDKGGWGGGRRRLGRRR------------APAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 E LN I R G G++ L R + AP A+ ++AP++ I D++ + + P P RP +HY + E+E F +G+F+LPP A IPLHDHPGM V+SR+L GSL++K +D + S +P LR ARL + P T L NLHE E GCA LD++ PPYD GR C Y++V+D + +L + +P DFDV++ Y GP Sbjct: 2 EFLNTIWRFSFGGNKDVVEGQKALERIQDLLVKAIAKYDGAPH-ALTAEEIAPVKAICDELFPANFQLTVPGTESSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYDLIK-------DSAAPRDKK-LR----ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCTYFRVVDSQDSNDNSEK---------------------IVMLESYSPLDFDVITEAYYGP 239
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|566010840|gb|ETI33751.1| (hypothetical protein F443_19618 [Phytophthora parasitica P1569] >gi|568006507|gb|ETL80763.1| hypothetical protein L917_18765 [Phytophthora parasitica]) HSP 1 Score: 120.939 bits (302), Expect = 3.591e-28 Identity = 88/274 (32.12%), Postives = 125/274 (45.62%), Query Frame = 0 Query: 116 EELNRISRKEEGDKGGWGGGRRRLGRRR------------APAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 E LN I R G G++ L R + AP A+ ++AP++ I D++ + + P P RP +HY + E+E F +G+F+LPP A IPLHDHPGM V+SR+L GSL++K +D + S +P LR ARL + P T L NLHE E GCA LD++ PPYD GR C Y++V+D + +L + +P DFDV++ Y GP Sbjct: 2 EFLNTIWRFSFGGNKDVVEGQKALERIQDLLVKAIAKYDGAPH-ALTAEEIAPVKAICDELFPANFQLTVPGTEGSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYDLIK-------DSAAPRDKK-LR----ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCTYFRVVDSQDSNDNSEK---------------------IVMLESYSPLDFDVITEAYYGP 239
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|567948338|gb|ETK74087.1| (hypothetical protein L915_19045 [Phytophthora parasitica] >gi|567977002|gb|ETL27513.1| hypothetical protein L916_18946 [Phytophthora parasitica] >gi|570314597|gb|ETO62545.1| hypothetical protein F444_19572 [Phytophthora parasitica P1976] >gi|570938361|gb|ETP03618.1| hypothetical protein F441_19445 [Phytophthora parasitica CJ01A1] >gi|570968644|gb|ETP31763.1| hypothetical protein F442_19396 [Phytophthora parasitica P10297] >gi|970648001|gb|KUF87667.1| 2-aminoethanethiol dioxygenase [Phytophthora nicotianae] >gi|970663647|gb|KUG00767.1| 2-aminoethanethiol dioxygenase [Phytophthora nicotianae]) HSP 1 Score: 119.398 bits (298), Expect = 1.344e-27 Identity = 87/274 (31.75%), Postives = 124/274 (45.26%), Query Frame = 0 Query: 116 EELNRISRKEEGDKGGWGGGRRRLGRRR------------APAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 E LN I R G G++ L R + AP A+ ++ P++ I D++ + + P P RP +HY + E+E F +G+F+LPP A IPLHDHPGM V+SR+L GSL++K +D + S +P LR ARL + P T L NLHE E GCA LD++ PPYD GR C Y++V+D + +L + +P DFDV++ Y GP Sbjct: 2 EFLNTIWRFSFGGNKDVVEGQKALERIQDLLVKAIAKYDGAPH-ALTAEEITPVKAICDELFPANFQLTVPGTEGSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYDLIK-------DSAAPRDKK-LR----ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCTYFRVVDSQDSNDNSEK---------------------IVMLESYSPLDFDVITEAYYGP 239
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|675209443|ref|XP_008913606.1| (hypothetical protein PPTG_17493 [Phytophthora parasitica INRA-310] >gi|568086158|gb|ETN01051.1| hypothetical protein PPTG_17493 [Phytophthora parasitica INRA-310]) HSP 1 Score: 118.627 bits (296), Expect = 2.432e-27 Identity = 87/274 (31.75%), Postives = 124/274 (45.26%), Query Frame = 0 Query: 116 EELNRISRKEEGDKGGWGGGRRRLGRRR------------APAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 E LN I R G G++ L R + AP A+ ++ P++ I D++ + + P P RP +HY + E+E F +G+F+LPP A IPLHDHPGM V+SR+L GSL++K +D + S +P LR ARL + P T L NLHE E GCA LD++ PPYD GR C Y++V+D + +L + +P DFDV++ Y GP Sbjct: 2 EFLNTIWRFSFGGNKDVVEGQKALERIQDLLVKAIAKYDGAPH-ALTAEEITPVKAICDELFPANFQLTVPGTEGSGP--DRPKRVHYQHVYEDETFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYDLIK-------DSAAPRDKK-LR----ARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCAYFRVVDSQDSNDNSEK---------------------IVMLESYSPLDFDVITEAYYGP 239
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|301123399|ref|XP_002909426.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100188|gb|EEY58240.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 118.242 bits (295), Expect = 3.708e-27 Identity = 74/236 (31.36%), Postives = 111/236 (47.03%), Query Frame = 0 Query: 148 AMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTS------RPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWCEPPSSSPSPSPSPSSSSFLRARGYARLTSSLWLEEPTTLSLFDTRNNLHEFHAGKE-GCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATYLGP 376 A+ + ++AP++ I DQ+ P + L+ P++ RP +HY + E+E F +G+F+LPP IPLHDHPGM V+SR+L GSL++K +D + +++ + ARL + P T L +NLHE + GCA LD++ PPY GR C YY+V+D + E + P DFDVV+ Y GP Sbjct: 45 ALTVEEIAPVKAICDQL--------FPANFQLKVPSAEDSGPERPKRVHYQHVYEDETFSIGIFILPPGVSIPLHDHPGMSVISRVLYGSLHIKSYDLIKDGAAASG------------KKHKARLRVDKTITAPYTTELLPDHSNLHELVGDDDIGCAFLDIITPPYHSNEGRDCTYYRVIDSSDCNSEKTVTLE-----------------------SYFPLDFDVVTEAYHGP 237
BLAST of EWM23588.1 vs. NCBI_GenBank
Match: gi|219129342|ref|XP_002184850.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403635|gb|EEC43586.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 120.553 bits (301), Expect = 4.831e-27 Identity = 86/253 (33.99%), Postives = 119/253 (47.04%), Query Frame = 0 Query: 154 VAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEE-DFHVGVFVLPPEARIPLHDHPGMCVLSRLLSGSLNVKDFDWC-----------EPPSSSPSPSPSPSSSSFLRARGYARLT--SSLW------------LEEPTTLSLFDTRNNLHEFHAGKEGCAILDVLIPPYDPMRGRPCNYYQVLDEGAPERGRRRRREGKGATKAGGREGLKVGKVYRLLPTEAPEDFDVVSATY--LGPSP 378 + PI + Q+E P+H + PP S + + YL L E + +G+FV PP ARIPLHDHPGMCVLSR+L GSL+ + D P S++ + S SS F+ +A T S W L P T L+ NLHEF AG +G A+LD+L+PPYD R C +Y++ R ++ ++ K G+ ++PT PEDF S Y LG P Sbjct: 108 LLPIARYRRQVE--------PIHRQITPP-SDDNTVRYLHLSEIPGQYSMGIFVFPPYARIPLHDHPGMCVLSRVLYGSLHRRSLDLALEDEENNDGSNSPTSATSHKNSSWISSHFMWRNKHATETTPSYPWGSKRAFEHRVDILTAPDTTILYPHEGNLHEFAAGPQGAAVLDILLPPYDESHHRDCTFYEI-----------RYDAFSQQEQSSSKDAHKEGRPCWIIPTCQPEDFHCTSGAYRELGEEP 340 The following BLAST results are available for this feature:
BLAST of EWM23588.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|