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Properties
| Property Name | Value |
|---|
| Product | dual specificity protein phosphatase 10 |
| Orig transcript id | gnl|cribi|Naga_100139g3.4756.mrna |
| Orig protein id | gnl|cribi|Naga_100139g3.4756 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:421882..424968 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7089 ID=rna7089|Name=rna7089|organism=Nannochloropsis gaditana|type=mRNA|length=3165bp
CTGTACTAGCACGGCGTGTCATTCCGACATCCTCCCCTATGCAACTTTCT
TTGTCCCACCGCACGCATTTGCGATATCACGTGGGGCAGGTGCATGTCAA
TCGCGCATTTTTTCCCATGTTGCACTCGTTTTCCATTGTTTTTTGGGACG
GGTTGCACGGCGAGCAGCAGCTGGCAAAGATCAGACCCTGCCTTCTGGTC
GGTTGGTTCCATGGAAGTGCCACACGTGGGGTATCGAGGCCGTGAAAGGC
AACTCGACCTTCTGTGCCGTGCTTCGAAGGGTCGTGAACGCCGTTTTTTC
CACGATGGATGGACTTTGTGGATGTGAGCTGGCCTTGAAGGCTTGCGCTC
GGCGCGGGGGGCCTGCTGAGTGCCACCTCACTCACTGGACTATGACATAA
AGTGGCCAGCACCAGAATCGGTAAACGCTACCTTTGAGTATCGTCGTCGC
TGTCGTCGACCATAAGCGTACCTTTCTCGCGGGCCCTAACCAAGCGACAC
ATAAAAAACAATCATCACCAACTGGAACAGTACGGTCTTGCCTTGTATGG
TCCGTCCTTCTCGTCCGGCCCCCCTCATGTTGGAGGAGCCGTTCATGCTT
TTCTCCGGGCTTGGCGGCGTTAGCACTCCTCACGCACCTGAAGACGACGA
TCCAAGCACAACACAAGAATCAACCATACTGAGCCCATGTTCGCGCTCCT
TGAGCCGGAACAAAGAGTTAGCGCCGGTGTCTCCGGCGGAAGCTCCTGTG
GGGGCGTCACCCAGACACGGTCTTGATACGACTCCCGACGAGATATTTAA
CCAACAGGAAGGACAGGGAGGCAATCCGAGCAACCCCACGGAGAGCGTGG
AGGACGCTCGAAACAGAAGTAGCAGCCAAAGCAGCGGCAGCAGCGCGTGC
AGAAAAATATGCACAGAAGGATTAGAGGAAGACAAAGAAAAAGCTGCCGA
GACAGCCAGCCCCCCTCTCACGTCCAAGCGCTCGACCTTTGGCTTTTTCA
AACGTTCCAACTCCGCCTCGTCCGCGCTGATGGACTTGCCAGTCGACAAC
ACCCTCTCCGCAGGGACCCCGCCAGCATCGTCATACCGGTGTCCGGGCCT
CAAGGTCAAGAAAAGGGGCTTCCCTGCCCTCATCCTGACGCCTCGCGGCA
ACTCCTCCCATCCAGCTACCTCCCTCCTGCCTCCCCGACCCTTGCCTCCC
CTTCCCCCCAGCCGCAGCGTCAATGGCACCCACAGTGGCAGTATCTCCAC
GCCAAACGGCGGCGGCAAGCCTCTTTCCTCCCCTCCCTCCCTCCTGAACC
TGATGGCCCGCCTGCGCAGGCGGCAACCAGCCACAGCCATCGAGGAGACC
TCCTGCTGCTCCTCCTCCACCTCCACCTCCTCCTCTTCCTCCTCCATCAT
CATGACGCCGGGCGAGATCAGCAGCCGGGAAGACCCGACCGCGGCGAGCC
GAAGCAGCAGCAGGCGCGTGCTCACGGTGGACACCGGGCCGCGATGCTCG
AGTGTATCCGGGCCCATGGCCCTCTCTACCATGGACTTCCACTACGACGG
GAGCAAGATCCTCGACTACCTGTACGTGGGCGGGGAGCACATCCCCAGCC
AGGACGCGCTCGCTGAGACATTCAACATCACGCACATCGTCAACACCACG
GTCAAGGACTACTATCCCCATCACCCTGTGTCCAGGGGCGACTACTGCCA
GCTCTTCTTGCTGGATGCGCTCTCGGAGGAACTCTCCGAGACGAAGATGG
AGACGGCGTTCCAAATGATTGATCGGGCCCGGGCGGGGGGGCACGCCTGC
CTGGTGCATTGTCGGAATGGGATGTCGCGGTCGACCTCGGTGGTGATAGC
CTACCTGATGCGTCACTTCAAGATGCCCTTGCTGGAGGCCTTCAATTTCG
TCCGAGAGCGTCGGCCTTGCACAAGCCCGAACCCGTCCTTCATGCGGCAA
TTGGCCGCGTTCGAGCGGGCCTGGCTGGGGGTGAGTGGGAACACGCTGGA
CGTGGACCACTACGCCGACGATCGGTTCGCGTCCATACGCGACCTGGCCG
TGGGGCCAGGGAGAGGGGGCGAGGAAGAGGAGGTTGTGGAGGAGGAGGAA
GAGGAAGAGGAAGAGGAGGGGAGGCTGGCGGGTCTGGAGGTGGGGGAAGA
GGATTCAAGTGGAGGGTGGGATGTGGGGTGTCCTTTGTCGGGGGAGGAGG
GACAGGGATGGGCGGAGGGCGAGGGCGAGGAAGAGGTTTCGAAGAGGTAA
AAGGAACTGGGCGGGAGAGACAGCGGGCGACATGCAGGCATGGGCGGATA
CGGAAACAGGGAAGGATCGATGCGCAAGGAGCAGCGAGATGCTGGCCACA
AGGACATGAGAGCGGGCTGGGGCCCGTGGGGAGGGCTGGTTGCCTAAGAG
GATGCCTGTCGCGGGTAGAATTTACGAAATTCGTGTACATTACTTCTTTC
CGCTTCTGGGAGAAGAACGGGGTAATTCAGGGGGAGTGCCCCAGCAGCAA
GAGGATCAGCAGTGCTCGTACAGAGGGAGCATGTCCACTAAGGAACAGTA
ACGTGACGAAGGATTCATAATTCGCAACGCGTTTCCTCGTCGTGGGGGAG
CGGAAGACTCTAGCTTTATACAACAGAGAAAAGATGTGCAAAGGAGGCAC
GGGAAGACGAAGATATAAAGGTGTCGTGGGCCACTTTGGTCGGCGATTGA
CACGGAGTGTGGCAATATGTTGGAAAGGATAGGCAAGGAATTGCGAGTAC
CCTGTGGCTTTAGAAGTGATTTCCATTTTTCTGCCACATGTAGAGGGATT
CAAATGTTAAGACAATTCTGATGTGTAACGAAAAGAGTGCATTGAGTTAG
GAATACGTGTGTGCAGAGACATGCGCGCCACTACGCAATTGATTAGATCA
AAGGCACTTAACTACACCTTGAATAATTCCCATTGGACGCCGTTTAAGTC
TATCGTGTGTGTAAATAGGCGACAAAGAGATATGGGTACTTAAAAGAGAA
CTTGGCACGCATGGGAGGCATTCTAATCGAATGTGAGCTGAGAGATGAGA
GAGATAAGAGCAGACACCGCCAGTCAATTTGAAAACAAATGAAGCTAAGG
AGCACATTCAGCAGGAGATACCCGAGTCGTGCTCTTTCTTTTCGTATTTC
CTACTGTTGCACGGG back to topprotein sequence of rna7089 >rna7089-protein ID=rna7089-protein|Name=rna7089|organism=Nannochloropsis gaditana|type=polypeptide|length=567bp
MVRPSRPAPLMLEEPFMLFSGLGGVSTPHAPEDDDPSTTQESTILSPCSR
SLSRNKELAPVSPAEAPVGASPRHGLDTTPDEIFNQQEGQGGNPSNPTES
VEDARNRSSSQSSGSSACRKICTEGLEEDKEKAAETASPPLTSKRSTFGF
FKRSNSASSALMDLPVDNTLSAGTPPASSYRCPGLKVKKRGFPALILTPR
GNSSHPATSLLPPRPLPPLPPSRSVNGTHSGSISTPNGGGKPLSSPPSLL
NLMARLRRRQPATAIEETSCCSSSTSTSSSSSSIIMTPGEISSREDPTAA
SRSSSRRVLTVDTGPRCSSVSGPMALSTMDFHYDGSKILDYLYVGGEHIP
SQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETK
METAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFN
FVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDL
AVGPGRGGEEEEVVEEEEEEEEEEGRLAGLEVGEEDSSGGWDVGCPLSGE
EGQGWAEGEGEEEVSKR back to topmRNA from alignment at CM002470.1:421882..424968- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7089 ID=rna7089|Name=rna7089|organism=Nannochloropsis gaditana|type=mRNA|length=3087bp|location=Sequence derived from alignment at CM002470.1:421882..424968- (Nannochloropsis gaditana)
TCACCACCCAGGGCGGTTGCTGCAGGATCCAACGCGGTCGAAACCCATTT
TCTCTGTGAGCATAAGTTCTTTGTTGCGTGGTTTCCCATGCGTGCGCCTT
GCATGGGTGTAAGTGTCTAGTTTTGTGTGAAGTATTTTTTTTTGCAGTCG
GAATGATGAGGAGAATGCAAGCACAGAATCCTCTCACTCGAGACCACCTG
AACATTCAACCCCGTGTTCAATGCAGTAGTGTGCGACCCTCTCACGCCAT
CTTCTTTCCCTTCTTGTCCTCCATATACATACACACATGTTTCAAAATAC
ATCTGTCTGCTTTTTGGTTCTTAGTGGCCAGCACCAGAATCGGTAAACGC
TACCTTTGAGTATCGTCGTCGCTGTCGTCGACCATAAGCGTACCTTTCTC
GCGGGCCCTAACCAAGCGACACATAAAAAACAATCATCACCAACTGGAAC
AGTACGGTCTTGCCTTGTATGGTCCGTCCTTCTCGTCCGGCCCCCCTCAT
GTTGGAGGAGCCGTTCATGCTTTTCTCCGGGCTTGGCGGCGTTAGCACTC
CTCACGCACCTGAAGACGACGATCCAAGCACAACACAAGAATCAACCATA
CTGAGCCCATGTTCGCGCTCCTTGAGCCGGAACAAAGAGTTAGCGCCGGT
GTCTCCGGCGGAAGCTCCTGTGGGGGCGTCACCCAGACACGGTCTTGATA
CGACTCCCGACGAGATATTTAACCAACAGGAAGGACAGGGAGGCAATCCG
AGCAACCCCACGGAGAGCGTGGAGGACGCTCGAAACAGAAGTAGCAGCCA
AAGCAGCGGCAGCAGCGCGTGCAGAAAAATATGCACAGAAGGATTAGAGG
AAGACAAAGAAAAAGCTGCCGAGACAGCCAGCCCCCCTCTCACGTCCAAG
CGCTCGACCTTTGGCTTTTTCAAACGTTCCAACTCCGCCTCGTCCGCGCT
GATGGACTTGCCAGTCGACAACACCCTCTCCGCAGGGACCCCGCCAGCAT
CGTCATACCGGTGTCCGGGCCTCAAGGTCAAGAAAAGGGGCTTCCCTGCC
CTCATCCTGACGCCTCGCGGCAACTCCTCCCATCCAGCTACCTCCCTCCT
GCCTCCCCGACCCTTGCCTCCCCTTCCCCCCAGCCGCAGCGTCAATGGCA
CCCACAGTGGCAGTATCTCCACGCCAAACGGCGGCGGCAAGCCTCTTTCC
TCCCCTCCCTCCCTCCTGAACCTGATGGCCCGCCTGCGCAGGCGGCAACC
AGCCACAGCCATCGAGGAGACCTCCTGCTGCTCCTCCTCCACCTCCACCT
CCTCCTCTTCCTCCTCCATCATCATGACGCCGGGCGAGATCAGCAGCCGG
GAAGACCCGACCGCGGCGAGCCGAAGCAGCAGCAGGCGCGTGCTCACGGT
GGACACCGGGCCGCGATGCTCGAGTGTATCCGGGCCCATGGCCCTCTCTA
CCATGGACTTCCACTACGACGGGAGCAAGATCCTCGACTACCTGTACGTG
GGCGGGGAGCACATCCCCAGCCAGGACGCGCTCGCTGAGACATTCAACAT
CACGCACATCGTCAACACCACGGTCAAGGACTACTATCCCCATCACCCTG
TGTCCAGGGGCGACTACTGCCAGCTCTTCTTGCTGGATGCGCTCTCGGAG
GAACTCTCCGAGACGAAGATGGAGACGGCGTTCCAAATGATTGATCGGGC
CCGGGCGGGGGGGCACGCCTGCCTGGTGCATTGTCGGAATGGGATGTCGC
GGTCGACCTCGGTGGTGATAGCCTACCTGATGCGTCACTTCAAGATGCCC
TTGCTGGAGGCCTTCAATTTCGTCCGAGAGCGTCGGCCTTGCACAAGCCC
GAACCCGTCCTTCATGCGGCAATTGGCCGCGTTCGAGCGGGCCTGGCTGG
GGGTGAGTGGGAACACGCTGGACGTGGACCACTACGCCGACGATCGGTTC
GCGTCCATACGCGACCTGGCCGTGGGGCCAGGGAGAGGGGGCGAGGAAGA
GGAGGTTGTGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAGGGGAGGCTGG
CGGGTCTGGAGGTGGGGGAAGAGGATTCAAGTGGAGGGTGGGATGTGGGG
TGTCCTTTGTCGGGGGAGGAGGGACAGGGATGGGCGGAGGGCGAGGGCGA
GGAAGAGGTTTCGAAGAGGTAAAAGGAACTGGGCGGGAGAGACAGCGGGC
GACATGCAGGCATGGGCGGATACGGAAACAGGGAAGGATCGATGCGCAAG
GAGCAGCGAGATGCTGGCCACAAGGACATGAGAGCGGGCTGGGGCCCGTG
GGGAGGGCTGGTTGCCTAAGAGGATGCCTGTCGCGGGTAGAATTTACGAA
ATTCGTGTACATTACTTCTTTCCGCTTCTGGGAGAAGAACGGGGTAATTC
AGGGGGAGTGCCCCAGCAGCAAGAGGATCAGCAGTGCTCGTACAGAGGGA
GCATGTCCACTAAGGAACAGTAACGTGACGAAGGATTCATAATTCGCAAC
GCGTTTCCTCGTCGTGGGGGAGCGGAAGACTCTAGCTTTATACAACAGAG
AAAAGATGTGCAAAGGAGGCACGGGAAGACGAAGATATAAAGGTGTCGTG
GGCCACTTTGGTCGGCGATTGACACGGAGTGTGGCAATATGTTGGAAAGG
ATAGGCAAGGAATTGCGAGTACCCTGTGGCTTTAGAAGTGATTTCCATTT
TTCTGCCACATGTAGAGGGATTCAAATGTTAAGACAATTCTGATGTGTAA
CGAAAAGAGTGCATTGAGTTAGGAATACGTGTGTGCAGAGACATGCGCGC
CACTACGCAATTGATTAGATCAAAGGCACTTAACTACACCTTGAATAATT
CCCATTGGACGCCGTTTAAGTCTATCGTGTGTGTAAATAGGCGACAAAGA
GATATGGGTACTTAAAAGAGAACTTGGCACGCATGGGAGGCATTCTAATC
GAATGTGAGCTGAGAGATGAGAGAGATAAGAGCAGACACCGCCAGTCAAT
TTGAAAACAAATGAAGCTAAGGAGCACATTCAGCAGGAGATACCCGAGTC
GTGCTCTTTCTTTTCGTATTTCCTACTGTTGCACGGG back to topCoding sequence (CDS) from alignment at CM002470.1:421882..424968- >rna7089 ID=rna7089|Name=rna7089|organism=Nannochloropsis gaditana|type=CDS|length=1704bp|location=Sequence derived from alignment at CM002470.1:421882..424968- (Nannochloropsis gaditana)
ATGGTCCGTCCTTCTCGTCCGGCCCCCCTCATGTTGGAGGAGCCGTTCAT
GCTTTTCTCCGGGCTTGGCGGCGTTAGCACTCCTCACGCACCTGAAGACG
ACGATCCAAGCACAACACAAGAATCAACCATACTGAGCCCATGTTCGCGC
TCCTTGAGCCGGAACAAAGAGTTAGCGCCGGTGTCTCCGGCGGAAGCTCC
TGTGGGGGCGTCACCCAGACACGGTCTTGATACGACTCCCGACGAGATAT
TTAACCAACAGGAAGGACAGGGAGGCAATCCGAGCAACCCCACGGAGAGC
GTGGAGGACGCTCGAAACAGAAGTAGCAGCCAAAGCAGCGGCAGCAGCGC
GTGCAGAAAAATATGCACAGAAGGATTAGAGGAAGACAAAGAAAAAGCTG
CCGAGACAGCCAGCCCCCCTCTCACGTCCAAGCGCTCGACCTTTGGCTTT
TTCAAACGTTCCAACTCCGCCTCGTCCGCGCTGATGGACTTGCCAGTCGA
CAACACCCTCTCCGCAGGGACCCCGCCAGCATCGTCATACCGGTGTCCGG
GCCTCAAGGTCAAGAAAAGGGGCTTCCCTGCCCTCATCCTGACGCCTCGC
GGCAACTCCTCCCATCCAGCTACCTCCCTCCTGCCTCCCCGACCCTTGCC
TCCCCTTCCCCCCAGCCGCAGCGTCAATGGCACCCACAGTGGCAGTATCT
CCACGCCAAACGGCGGCGGCAAGCCTCTTTCCTCCCCTCCCTCCCTCCTG
AACCTGATGGCCCGCCTGCGCAGGCGGCAACCAGCCACAGCCATCGAGGA
GACCTCCTGCTGCTCCTCCTCCACCTCCACCTCCTCCTCTTCCTCCTCCA
TCATCATGACGCCGGGCGAGATCAGCAGCCGGGAAGACCCGACCGCGGCG
AGCCGAAGCAGCAGCAGGCGCGTGCTCACGGTGGACACCGGGCCGCGATG
CTCGAGTGTATCCGGGCCCATGGCCCTCTCTACCATGGACTTCCACTACG
ACGGGAGCAAGATCCTCGACTACCTGTACGTGGGCGGGGAGCACATCCCC
AGCCAGGACGCGCTCGCTGAGACATTCAACATCACGCACATCGTCAACAC
CACGGTCAAGGACTACTATCCCCATCACCCTGTGTCCAGGGGCGACTACT
GCCAGCTCTTCTTGCTGGATGCGCTCTCGGAGGAACTCTCCGAGACGAAG
ATGGAGACGGCGTTCCAAATGATTGATCGGGCCCGGGCGGGGGGGCACGC
CTGCCTGGTGCATTGTCGGAATGGGATGTCGCGGTCGACCTCGGTGGTGA
TAGCCTACCTGATGCGTCACTTCAAGATGCCCTTGCTGGAGGCCTTCAAT
TTCGTCCGAGAGCGTCGGCCTTGCACAAGCCCGAACCCGTCCTTCATGCG
GCAATTGGCCGCGTTCGAGCGGGCCTGGCTGGGGGTGAGTGGGAACACGC
TGGACGTGGACCACTACGCCGACGATCGGTTCGCGTCCATACGCGACCTG
GCCGTGGGGCCAGGGAGAGGGGGCGAGGAAGAGGAGGTTGTGGAGGAGGA
GGAAGAGGAAGAGGAAGAGGAGGGGAGGCTGGCGGGTCTGGAGGTGGGGG
AAGAGGATTCAAGTGGAGGGTGGGATGTGGGGTGTCCTTTGTCGGGGGAG
GAGGGACAGGGATGGGCGGAGGGCGAGGGCGAGGAAGAGGTTTCGAAGAG
GTAA back to top
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