EWM23604.1, cds7072 (CDS) Nannochloropsis gaditana

Overview
NameEWM23604.1
Unique Namecds7072
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:422797..424500 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23604.1
Productdual specificity protein phosphatase 10
Orig transcript idgnl|cribi|Naga_100139g3.4756.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:422797..424500 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004725protein tyrosine phosphatase activity
GO:0016791phosphatase activity
GO:0008138protein tyrosine/serine/threonine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016311dephosphorylation
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR000387Tyr/Dual-sp_Pase
IPR016130Tyr_Pase_AS
IPR024950DUSP
IPR000340Dual-sp_phosphatase_cat-dom
IPR029021Prot-tyrosine_phosphatase-like
IPR020422Dual-sp_phosphatase_subgr_cat
Homology
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|585104744|gb|EWM23603.1| (dual specificity protein phosphatase 10 [Nannochloropsis gaditana] >gi|585104745|gb|EWM23604.1| dual specificity protein phosphatase 10 [Nannochloropsis gaditana])

HSP 1 Score: 1150.19 bits (2974), Expect = 0.000e+0
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0
Query:    1 MVRPSRPAPLMLEEPFMLFSGLGGVSTPHAPEDDDPSTTQESTILSPCSRSLSRNKELAPVSPAEAPVGASPRHGLDTTPDEIFNQQEGQGGNPSNPTESVEDARNRSSSQSSGSSACRKICTEGLEEDKEKAAETASPPLTSKRSTFGFFKRSNSASSALMDLPVDNTLSAGTPPASSYRCPGLKVKKRGFPALILTPRGNSSHPATSLLPPRPLPPLPPSRSVNGTHSGSISTPNGGGKPLSSPPSLLNLMARLRRRQPATAIEETSCCSSSTSTSSSSSSIIMTPGEISSREDPTAASRSSSRRVLTVDTGPRCSSVSGPMALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPGRGGEEEEVVEEEEEEEEEEGRLAGLEVGEEDSSGGWDVGCPLSGEEGQGWAEGEGEEEVSKR 567
            MVRPSRPAPLMLEEPFMLFSGLGGVSTPHAPEDDDPSTTQESTILSPCSRSLSRNKELAPVSPAEAPVGASPRHGLDTTPDEIFNQQEGQGGNPSNPTESVEDARNRSSSQSSGSSACRKICTEGLEEDKEKAAETASPPLTSKRSTFGFFKRSNSASSALMDLPVDNTLSAGTPPASSYRCPGLKVKKRGFPALILTPRGNSSHPATSLLPPRPLPPLPPSRSVNGTHSGSISTPNGGGKPLSSPPSLLNLMARLRRRQPATAIEETSCCSSSTSTSSSSSSIIMTPGEISSREDPTAASRSSSRRVLTVDTGPRCSSVSGPMALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPGRGGEEEEVVEEEEEEEEEEGRLAGLEVGEEDSSGGWDVGCPLSGEEGQGWAEGEGEEEVSKR
Sbjct:    1 MVRPSRPAPLMLEEPFMLFSGLGGVSTPHAPEDDDPSTTQESTILSPCSRSLSRNKELAPVSPAEAPVGASPRHGLDTTPDEIFNQQEGQGGNPSNPTESVEDARNRSSSQSSGSSACRKICTEGLEEDKEKAAETASPPLTSKRSTFGFFKRSNSASSALMDLPVDNTLSAGTPPASSYRCPGLKVKKRGFPALILTPRGNSSHPATSLLPPRPLPPLPPSRSVNGTHSGSISTPNGGGKPLSSPPSLLNLMARLRRRQPATAIEETSCCSSSTSTSSSSSSIIMTPGEISSREDPTAASRSSSRRVLTVDTGPRCSSVSGPMALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPGRGGEEEEVVEEEEEEEEEEGRLAGLEVGEEDSSGGWDVGCPLSGEEGQGWAEGEGEEEVSKR 567          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|1173937982|gb|OQR88495.1| (carbohydrate-binding protein [Thraustotheca clavata])

HSP 1 Score: 118.627 bits (296), Expect = 1.126e-24
Identity = 66/189 (34.92%), Postives = 107/189 (56.61%), Query Frame = 0
Query:  325 ALSTMDFHYDGSKILD-YLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPGRGGEEEE 512
            A+ ++   ++ +K+LD  LY+GG    +   + +T +ITHIVN T +   P++     +Y Q+ + D     + +   E     I +A     AC+VHC +GMSRS ++V+AYLM++ +M LL+A  ++R  R   SPN  FM+QL   E +   V  N+LD+  Y  DRFA ++DLA+ P    ++ E
Sbjct:   25 AIRSLSIQHNATKLLDGLLYIGGNDCVNDLLVLQTMDITHIVNCTRET--PNYFTEHFEYLQIPINDDPDVNI-DMYFEEICTFIHKAIENKMACMVHCSHGMSRSATIVLAYLMQYKEMTLLQALTYLRSLRRVVSPNIGFMQQLLTLELSIYQV--NSLDLQEYKKDRFAPVQDLAMVPILSTQDNE 208          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|1173944250|gb|OQR93011.1| (dual specificity protein phosphatase 2-like [Achlya hypogyna])

HSP 1 Score: 109.768 bits (273), Expect = 5.388e-24
Identity = 67/194 (34.54%), Postives = 106/194 (54.64%), Query Frame = 0
Query:  315 PRCSSVSGPMALSTMDFHYDGSKILD-YLYVGGEHIPSQDALAETFNITHIVNTTVK--DYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPG 505
            PR SS+       ++   ++ +++LD  L++GG    +      +  +THIVN T +  DY+P H     +Y ++ + D   E   +   + A   I++A     ACLVHC +GMSRS ++V+AYL+ H  M LLEA +++R RR   SPN  FM++L   E      +  +LD+  Y  DRFA I++LA+ P 
Sbjct:   17 PRLSSIR------SLSIQHNATQLLDGLLFIGGNDCVNDLPALLSMGVTHIVNCTRETPDYFPEHV----EYLRVAVTDE-PEVAIDAFFDEACSFINKAVDNKRACLVHCSHGMSRSATIVLAYLISHRGMQLLEALDYLRARRRVVSPNVGFMQRLVELEIKVHHAA--SLDLQEYKKDRFAPIQNLALNPA 197          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|813126792|ref|XP_012197139.1| (hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65] >gi|641538107|gb|KDO31941.1| hypothetical protein SPRG_03157 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 107.457 bits (267), Expect = 3.660e-23
Identity = 64/187 (34.22%), Postives = 104/187 (55.61%), Query Frame = 0
Query:  325 ALSTMDFHYDGSKILD-YLYVGGEHIPSQDALAETFNITHIVNTTVK--DYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAVGPGRGG 508
            A+ ++   ++ +++LD  LY+GG    +   +  T +I+H+VN T +  +Y+P     R +Y ++ + D    E+ +   + A   I +A     AC+VHC +GMSRS ++V+AYL++  KM LL+A  ++R  R   SPN  FM++L   E A      N+LD+  Y  DRFA I DLA+ P    
Sbjct:   22 AIRSLSIQHNATRLLDGLLYIGGNDCVNDLDVLGTMDISHVVNCTRETPNYFP----DRVEYLRVPITDEPEMEI-DMYFDDACAFIHKAVENHMACMVHCSHGMSRSATIVLAYLVKIRKMRLLDALQYLRSLRRVVSPNIGFMQRLLELEMAVH--DANSLDLQAYTKDRFAPIPDLALNPAHSA 201          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|1043420432|gb|OCA33062.1| (hypothetical protein XENTR_v900130371mg, partial [Xenopus tropicalis])

HSP 1 Score: 107.071 bits (266), Expect = 6.847e-23
Identity = 56/136 (41.18%), Postives = 81/136 (59.56%), Query Frame = 0
Query:  338 ILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFE 473
            IL +LY+G EH        +T NI++IVN T      H+     +Y +L   D+  + L +   E AF+ ID A   G A L+HC+ G+SRS ++VIAYLM+H +M + +A+ FV+ +RP  SPN +FM QL  FE
Sbjct:   53 ILPFLYLGNEHDAQDLETMQTRNISYIVNVTTHLPLYHYEKGVFNYKRLPATDSNKQNLRQ-YFEEAFEFIDEAHQCGKALLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFE 187          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|847128637|ref|XP_012818730.1| (PREDICTED: dual specificity protein phosphatase 10 [Xenopus tropicalis])

HSP 1 Score: 109.768 bits (273), Expect = 3.050e-22
Identity = 56/136 (41.18%), Postives = 81/136 (59.56%), Query Frame = 0
Query:  338 ILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFE 473
            IL +LY+G EH        +T NI++IVN T      H+     +Y +L   D+  + L +   E AF+ ID A   G A L+HC+ G+SRS ++VIAYLM+H +M + +A+ FV+ +RP  SPN +FM QL  FE
Sbjct:  265 ILPFLYLGNEHDAQDLETMQTRNISYIVNVTTHLPLYHYEKGVFNYKRLPATDSNKQNLRQ-YFEEAFEFIDEAHQCGKALLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFE 399          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|291222201|ref|XP_002731106.1| (PREDICTED: dual specificity protein phosphatase 10-like [Saccoglossus kowalevskii])

HSP 1 Score: 104.76 bits (260), Expect = 1.639e-20
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 0
Query:  331 FHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHH---PVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAW 476
            F +  + +L +LYVGGE   S   L +   I++I+N T   + P H     S+  Y +L   D   + L +   E AF+ ID AR  G + LVHC+ G+SRS ++ IAY+M+H KM + + + +V+ +RP  SPN +FM QL  FE A 
Sbjct:  256 FKHPPTPVLPFLYVGGESDASDHELLKRLKISYILNMT--SHIPLHFESVTSKIKYKRLPASDNCQQNLRQ-YFEEAFEFIDDARYSGSSILVHCQAGISRSATITIAYIMKHTKMTMTDVYKYVKHKRPIISPNLNFMGQLIEFENAL 401          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|698814950|ref|XP_009840504.1| (hypothetical protein H257_14402 [Aphanomyces astaci] >gi|574104530|gb|ETV70061.1| hypothetical protein H257_14402 [Aphanomyces astaci])

HSP 1 Score: 98.9821 bits (245), Expect = 4.209e-20
Identity = 64/180 (35.56%), Postives = 90/180 (50.00%), Query Frame = 0
Query:  325 ALSTMDFHYDGSKILDYLYVGGEHIPSQDALAETFNITHIVNTT--VKDYYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFERAWLGVSGNTLDVDHYADDRFASIRDLAV 502
            A+ +    +D +K+LD LYVGG  I       ++  ITH+VN T  +  YY        +Y ++ L D   +   E   E   + I  AR  G  CLVHC  GMSRS + V+ YL+    M +LEA  + R  RP  SPN  FM +L   E+        ++D+  Y  DR+A+I DL V
Sbjct:   15 AVGSFAVQHDITKVLDGLYVGGRGIADDLLAMQSLAITHVVNCTQDIPCYYD----DSLEYLRVPLTDD-PDTAIEAHFEIVVKFIHDAREMGQTCLVHCSRGMSRSATFVLVYLVERHDMSVLEALQYTRALRPVISPNVGFMGKLLDLEQRLH--QRCSVDLHKYRKDRYAAIEDLVV 187          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|514684951|ref|XP_004990055.1| (hypothetical protein PTSG_09628 [Salpingoeca rosetta] >gi|326432423|gb|EGD77993.1| hypothetical protein PTSG_09628 [Salpingoeca rosetta])

HSP 1 Score: 101.679 bits (252), Expect = 7.897e-20
Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 0
Query:  337 KILDYLYVGGEHIPSQDALAETFNITHIVNTTVKD--YYPHHPVSRGDYCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFER 474
            +IL Y+YVG E    ++ +     ITHI+N T +    +PH      +YC + +LD+ ++ L     E AF+ I+RAR  G   LVHC  G+SRS SV IAYLM   KM L +A+  V+++RP  SPN  FM +L  +E+
Sbjct:  192 EILPYMYVGAEAHAEKEEIVRKHGITHILNLTTRSPTRHPH-----IEYCVIEILDSWNQNLIAHFGE-AFEFIERAREAGGKVLVHCVAGISRSPSVAIAYLMFKNKMSLSDAYALVKKKRPSISPNLDFMAELQQYEK 325          
BLAST of EWM23604.1 vs. NCBI_GenBank
Match: gi|1191066868|ref|XP_020911935.1| (dual specificity protein phosphatase 10-like isoform X2 [Exaiptasia pallida])

HSP 1 Score: 97.0561 bits (240), Expect = 1.633e-19
Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 0
Query:  335 GSKILDYLYVGGEHIPSQDALAETFNITHIVNTTVKDYYPHHPVSRGD--YCQLFLLDALSEELSETKMETAFQMIDRARAGGHACLVHCRNGMSRSTSVVIAYLMRHFKMPLLEAFNFVRERRPCTSPNPSFMRQLAAFER 474
             S IL +L++G E   + + L +   I  I+N T  +  P+  V R D  Y Q+ + D+  E++ +   E A + ID ARA G   LVHC  G+SRS +V +AY+M+H  + L +A+ FV+E+RP  SPN +FM  L  +E+
Sbjct:   61 ASAILPFLFLGSEEGAADEELVDRLAIKFILNMT--EMCPNFFVHRKDIHYKQIKINDSYQEDIGQY-FEEAVRFIDEARANGTRVLVHCHAGVSRSATVTVAYVMKHLGLSLNDAYKFVKEKRPEISPNLNFMGHLLKYEK 199          
The following BLAST results are available for this feature:
BLAST of EWM23604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104744|gb|EWM23603.1|0.000e+0100.00dual specificity protein phosphatase 10 [Nannochlo... [more]
gi|1173937982|gb|OQR88495.1|1.126e-2434.92carbohydrate-binding protein [Thraustotheca clavat... [more]
gi|1173944250|gb|OQR93011.1|5.388e-2434.54dual specificity protein phosphatase 2-like [Achly... [more]
gi|813126792|ref|XP_012197139.1|3.660e-2334.22hypothetical protein SPRG_03157 [Saprolegnia paras... [more]
gi|1043420432|gb|OCA33062.1|6.847e-2341.18hypothetical protein XENTR_v900130371mg, partial [... [more]
gi|847128637|ref|XP_012818730.1|3.050e-2241.18PREDICTED: dual specificity protein phosphatase 10... [more]
gi|291222201|ref|XP_002731106.1|1.639e-2038.26PREDICTED: dual specificity protein phosphatase 10... [more]
gi|698814950|ref|XP_009840504.1|4.209e-2035.56hypothetical protein H257_14402 [Aphanomyces astac... [more]
gi|514684951|ref|XP_004990055.1|7.897e-2040.71hypothetical protein PTSG_09628 [Salpingoeca roset... [more]
gi|1191066868|ref|XP_020911935.1|1.633e-1938.03dual specificity protein phosphatase 10-like isofo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7089rna7089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications