rna7075, rna7075 (mRNA) Nannochloropsis gaditana

Overview
Namerna7075
Unique Namerna7075
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length785
Alignment locationCM002470.1:388666..389561 -

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Properties
Property NameValue
ProductHypothetical protein
Orig transcript idgnl|cribi|Naga_101085g1.4398.mrna
Orig protein idgnl|cribi|Naga_101085g1.4398
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:388666..389561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101085g1gene6841Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23615.1cds7058Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7075rna7075-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7075 ID=rna7075|Name=rna7075|organism=Nannochloropsis gaditana|type=mRNA|length=785bp
ATGACGGAGGAGGAGAGGGAGCGGGAGAGGCGGCGACGGCTTGGGAGGAG
AGGAGGGGGGCATGTGGAGGCAGAGGAAGAGGGGGTTGGAAGAGAAGGAG
AAAGGGGAGGGAGGGAGGAAGGGGCGAAAGCGCCGACTTCCGCGTGGCCG
TTCCGTTGGTGGGGAGCGGATTCCCGGGCGACCTCCTCCCCTCCCTCCGC
CCCTTCCTCCGTCCCGCCCTCGGTGGGTCCCTCCGGACCTCCGGACCTCC
ACGCCTCGTGCCGGCGGGCCTTCTGGGTCTTCTGCCTCGTCTTCCTCGCC
TGCCTCGTCCGACAATGGGGATTGGGGGGGGAAAGAGGAAGGATGTGCGC
GGCAGGGACAGGCAAGGGGTACGATGTGTGGATATATGTGCGTGCTTTGG
CACAATTTTTGGGGTGGGGAGGAGACGTCGGGGGTGGGGAGATGGCGGTG
GAGGAGGAAGGAAATGAGTACCTAGGGCACAGGCATATTATGAGCGTGCC
TCTGTGATTGGTGCTTCAGCCAGGAGGGGCATGCACGGGGAAGGGGGGGT
AATTCGGGGGGGCAGCGGGGCCAAGAGGGAGTAGGGACGGCGGTGGCCCA
CGACCAGGCGCGGTTCTTTTCTCTTGGTTCTGTACGCACGGTGGCCGAGC
CGCGTGCCCCGGATCGACAGGGAGGAAGAGAGAAGGGAGGAGAAAGACAT
GTAGATAGGGCCTTGGGGCAGCGTCGCGGCCTGGATTTCACGCGACTTCA
AAAGGAACCTTCAACTCGACATCCCAAAACGCACC
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protein sequence of rna7075

>rna7075-protein ID=rna7075-protein|Name=rna7075|organism=Nannochloropsis gaditana|type=polypeptide|length=245bp
MSMSTATDVSPPSPLPVAERLAPSCRGPLKQSLSSSCLPASPPAPHLARL
SGPLYKRKDHLTWKWRPRLFRAHHEDFLLFYYLPRTSPVTVPPRGVVPLV
GCAVHVMHTAEVIGGGDRKRCGYVFEVRHAWLGKPWVLAAETEEERERWV
RGLRRLIREAHAALSLGGEEEEECMGEEEEEGEKEVEEEHLERLVWPGYE
EAVQAALKRLLEYAEVGWGRWTVSRGSGNRLLPGACARRGECVRD
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mRNA from alignment at CM002470.1:388666..389561-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7075 ID=rna7075|Name=rna7075|organism=Nannochloropsis gaditana|type=mRNA|length=896bp|location=Sequence derived from alignment at CM002470.1:388666..389561- (Nannochloropsis gaditana)
GTATGCCCTTTCTTTTTTGCAGAAGACAGGTCGCTTGACGAGAAAGGTCA
AGTTCCCGGATACGACATCAGCCGAGCGGGGGCCTCGAGGCACACACGCG
GACGGCTGGTCTCATCTCCCATCCCCACCCATTGCCTGCGCCTTGACTAT
TGTAGGCTATGTCCATGTCTACCGCCACCGACGTCTCCCCGCCGTCCCCC
CTCCCCGTTGCTGAACGTCTGGCACCTTCCTGCCGCGGGCCCCTCAAGCA
AAGCCTTTCGTCCTCCTGTCTGCCCGCTTCCCCCCCCGCCCCCCACCTCG
CACGGCTGTCAGGACCCTTGTACAAGCGGAAAGACCACTTGACGTGGAAA
TGGCGCCCACGCCTCTTCCGGGCCCATCACGAAGATTTCCTTCTGTTCTA
CTACCTGCCCCGAACCTCCCCCGTCACGGTTCCCCCCCGGGGGGTGGTGC
CCCTGGTAGGCTGTGCCGTGCACGTCATGCACACGGCAGAGGTCATCGGA
GGCGGGGACAGGAAGAGATGTGGCTATGTATTCGAGGTCAGGCATGCCTG
GTTGGGTAAGCCCTGGGTACTTGCAGCGGAGACGGAGGAGGAGAGGGAGC
GCTGGGTCCGAGGCTTGAGGAGGTTGATCAGGGAGGCCCACGCCGCGTTG
AGCCTGGGCGGGGAGGAGGAGGAGGAGTGCATGGGGGAGGAGGAGGAGGA
AGGGGAAAAGGAGGTGGAAGAGGAGCACCTCGAGCGTCTGGTCTGGCCTG
GCTACGAGGAGGCAGTGCAGGCGGCCTTGAAGCGGCTGTTGGAGTACGCC
GAGGTAGGGTGGGGGCGCTGGACCGTGTCACGTGGTTCAGGGAACCGCCT
CTTGCCTGGCGCGTGCGCCCGGCGGGGGGAATGCGTGCGAGATTGA
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Coding sequence (CDS) from alignment at CM002470.1:388666..389561-

>rna7075 ID=rna7075|Name=rna7075|organism=Nannochloropsis gaditana|type=CDS|length=738bp|location=Sequence derived from alignment at CM002470.1:388666..389561- (Nannochloropsis gaditana)
ATGTCCATGTCTACCGCCACCGACGTCTCCCCGCCGTCCCCCCTCCCCGT
TGCTGAACGTCTGGCACCTTCCTGCCGCGGGCCCCTCAAGCAAAGCCTTT
CGTCCTCCTGTCTGCCCGCTTCCCCCCCCGCCCCCCACCTCGCACGGCTG
TCAGGACCCTTGTACAAGCGGAAAGACCACTTGACGTGGAAATGGCGCCC
ACGCCTCTTCCGGGCCCATCACGAAGATTTCCTTCTGTTCTACTACCTGC
CCCGAACCTCCCCCGTCACGGTTCCCCCCCGGGGGGTGGTGCCCCTGGTA
GGCTGTGCCGTGCACGTCATGCACACGGCAGAGGTCATCGGAGGCGGGGA
CAGGAAGAGATGTGGCTATGTATTCGAGGTCAGGCATGCCTGGTTGGGTA
AGCCCTGGGTACTTGCAGCGGAGACGGAGGAGGAGAGGGAGCGCTGGGTC
CGAGGCTTGAGGAGGTTGATCAGGGAGGCCCACGCCGCGTTGAGCCTGGG
CGGGGAGGAGGAGGAGGAGTGCATGGGGGAGGAGGAGGAGGAAGGGGAAA
AGGAGGTGGAAGAGGAGCACCTCGAGCGTCTGGTCTGGCCTGGCTACGAG
GAGGCAGTGCAGGCGGCCTTGAAGCGGCTGTTGGAGTACGCCGAGGTAGG
GTGGGGGCGCTGGACCGTGTCACGTGGTTCAGGGAACCGCCTCTTGCCTG
GCGCGTGCGCCCGGCGGGGGGAATGCGTGCGAGATTGA
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Synonyms
Publications